Skip to main content Accessibility help
×
Home
Hostname: page-component-ffbbcc459-gmk6f Total loading time: 0.186 Render date: 2022-03-10T02:42:22.888Z Has data issue: true Feature Flags: { "shouldUseShareProductTool": true, "shouldUseHypothesis": true, "isUnsiloEnabled": true, "useRatesEcommerce": false, "useNewApi": true }

Functional analysis of the dairy cow mammary transcriptome between early lactation and mid-dry period

Published online by Cambridge University Press:  07 February 2019

Ye Lin
Affiliation:
Key Laboratory of Dairy Science of Education Ministry, Northeast Agricultural University, Harbin 150030, China
He Lv
Affiliation:
Key Laboratory of Dairy Science of Education Ministry, Northeast Agricultural University, Harbin 150030, China
Minghui Jiang
Affiliation:
Key Laboratory of Animal Cellular and Genetics Engineering of Heilongjiang Province, Northeast Agricultural University, Harbin 150030, China
Jinyu Zhou
Affiliation:
Key Laboratory of Dairy Science of Education Ministry, Northeast Agricultural University, Harbin 150030, China
Shuyuan Song
Affiliation:
Key Laboratory of Animal Cellular and Genetics Engineering of Heilongjiang Province, Northeast Agricultural University, Harbin 150030, China
Xiaoming Hou*
Affiliation:
Key Laboratory of Animal Cellular and Genetics Engineering of Heilongjiang Province, Northeast Agricultural University, Harbin 150030, China
*
Author for correspondence: Xiaoming Hou, Email: xiaominghou@126.com

Abstract

In this research communication we used digital gene expression (DGE) analysis to identify differences in gene expression in the mammary glands of dairy cows between early lactation and the mid-dry period. A total of 741 genes were identified as being differentially expressed by DGE analysis. Compared with their expression in dry cows, 214 genes were up-regulated and 527 genes were down-regulated in lactating cow mammary glands. Gene Ontology analysis showed that lactation was supported by increased gene expression related to metabolic processes and nutrient transport and was associated with decreased gene expression related to cell proliferation. Pathway mapping using the Kyoto Encyclopedia of Genes and Genomes showed that 579 differentially expressed genes had pathway annotations related to 204 pathways. Metabolic pathway-related genes were the most significantly enriched. Genes and pathways identified by the present study provide insights into molecular events that occur in the mammary gland between early lactation and mid-dry period, which can be used to facilitate further investigation of the mechanisms underlying lactation and mammary tissue remodeling in dairy cows.

Type
Research Article
Copyright
Copyright © Hannah Dairy Research Foundation 2019 

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

References

Bionaz, M and Loor, JJ (2008) Gene networks driving bovine milk fat synthesis during the lactation cycle. BMC Genomics 9, 366.CrossRefGoogle ScholarPubMed
Bionaz, M and Loor, JJ (2011) Gene networks driving bovine mammary protein synthesis during the lactation cycle. Bioinformatics and Biology Insights 5, 8398.CrossRefGoogle ScholarPubMed
Capuco, AV, Akers, RM and Smith, JJ (1997) Mammary growth in Holstein cows during the dry period: quantification of nucleic acids and histology. Journal of Dairy Science 80, 477487.CrossRefGoogle ScholarPubMed
Collier, RJ, Annen-Dawson, EL and Pezeshki, A (2012) Effects of continuous lactation and short dry periods on mammary function and animal health. Animal 6, 403414.CrossRefGoogle ScholarPubMed
Dado-Senn, B, Skibiel, AL, Fabris, TF, Zhang, Y, Dahl, GE, Penagaricano, F and Laporta, J (2018) RNA-Seq reveals novel genes and pathways involved in bovine mammary involution during the dry period and under environmental heat stress. Scientific Reports 8, 11096.CrossRefGoogle ScholarPubMed
Gao, Y, Lin, X, Shi, K, Yan, Z and Wang, Z (2013) Bovine mammary gene expression profiling during the onset of lactation. PLoS One 8, e70393.CrossRefGoogle ScholarPubMed
Sinowatz, F, Schams, D, Habermann, F, Berisha, B and Vermehren, M (2006) Localization of fibroblast growth factor I (acid fibroblast growth factor) and its mRNA in the bovine mammary gland during mammogenesis, lactation and involution. Anatomia Histologia Embryologia 35, 202207.CrossRefGoogle ScholarPubMed
‘t Hoen, PA, Ariyurek, Y, Thygesen, HH, Vreugdenhil, E, Vossen, RH, de Menezes, RX, Boer, JM, van Ommen, GJ and den Dunnen, JT (2008) Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms. Nucleic Acids Research 36, e141.CrossRefGoogle ScholarPubMed
Truchet, S, Chat, S and Ollivier-Bousquet, M (2014) Milk secretion: the role of SNARE proteins. Journal of Mammary Gland Biology and Neoplasia 19, 119130.CrossRefGoogle ScholarPubMed
Wang, W, Lv, N, Zhang, S, Shui, G, Qian, H, Zhang, J, Chen, Y, Ye, J, Xie, Y, Shen, Y, Wenk, MR and Li, P (2012) Cidea is an essential transcriptional coactivator regulating mammary gland secretion of milk lipids. Nature Medicine 18, 235243.CrossRefGoogle ScholarPubMed
Supplementary material: PDF

Lin et al. supplementary material

Lin et al. supplementary material 1

Download Lin et al. supplementary material(PDF)
PDF 611 KB
8
Cited by

Send article to Kindle

To send this article to your Kindle, first ensure no-reply@cambridge.org is added to your Approved Personal Document E-mail List under your Personal Document Settings on the Manage Your Content and Devices page of your Amazon account. Then enter the ‘name’ part of your Kindle email address below. Find out more about sending to your Kindle. Find out more about sending to your Kindle.

Note you can select to send to either the @free.kindle.com or @kindle.com variations. ‘@free.kindle.com’ emails are free but can only be sent to your device when it is connected to wi-fi. ‘@kindle.com’ emails can be delivered even when you are not connected to wi-fi, but note that service fees apply.

Find out more about the Kindle Personal Document Service.

Functional analysis of the dairy cow mammary transcriptome between early lactation and mid-dry period
Available formats
×

Send article to Dropbox

To send this article to your Dropbox account, please select one or more formats and confirm that you agree to abide by our usage policies. If this is the first time you use this feature, you will be asked to authorise Cambridge Core to connect with your <service> account. Find out more about sending content to Dropbox.

Functional analysis of the dairy cow mammary transcriptome between early lactation and mid-dry period
Available formats
×

Send article to Google Drive

To send this article to your Google Drive account, please select one or more formats and confirm that you agree to abide by our usage policies. If this is the first time you use this feature, you will be asked to authorise Cambridge Core to connect with your <service> account. Find out more about sending content to Google Drive.

Functional analysis of the dairy cow mammary transcriptome between early lactation and mid-dry period
Available formats
×
×

Reply to: Submit a response

Please enter your response.

Your details

Please enter a valid email address.

Conflicting interests

Do you have any conflicting interests? *