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What have natural and human changes wrought on the foraminifera of San Francisco Bay late Quaternary estuaries?

  • Amy E. Lesen (a1) and Jere H. Lipps (a2)
Abstract

In this study we compare the foraminifera of modern South San Francisco Bay with fossils from sediments of a previous estuary at 125 ka to provide a basis for interpreting the impact of natural and human change on the benthic ecosystem. All the species found in the Pleistocene sediments of this study are estuarine and/or shallow-water species occurring commonly in San Francisco Bay today, except for the introduced foraminifer Trochammina hadai, a native of Japan that was not found in samples taken in San Francisco Bay before 1983. The biodiversity and species composition of the fossil and modern assemblages before the introduction of T. hadai are nearly identical, suggesting that the environmental and physical changes in the 125,000-year-old and modern estuaries have not had a significant effect on the meiofauna of the Bay. In contrast, modern anthropogenic change in the form of species introductions has impacted the modern foraminiferal assemblage: T. hadai began to dominate the modern assemblage a decade after its introduction. Similar to the recorded impacts of introductions of marine metazoan invertebrate species, the dominance of T. hadai changed species proportions in the post-1980s foraminiferal assemblage, however no known extinctions in the native foraminiferal fauna occurred.

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Corresponding author
Corresponding author. E-mail address: amylesen@gmail.com (A.E. Lesen).
References
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Alve, E. Benthic foraminifera in sediment cores reflecting heavy metal pollution of Sorfjord, western Norway. Journal of Foraminiferal Research 21, 1 (1991). 119.
Alve, E. Benthic foraminiferal responses to estuarine pollution: a review. Journal of Foraminiferal Research 25, 3 (1995). 190203.
Aoshima, M. Depositional environment of the Plio-Pleistocene Kakegawa Group Japan a comparative study of the fossil and the recent foraminifera. Journal of the Faculty of Science University of Tokyo Section II Geology Mineralogy Geography Geophysics 19, 5 (1979). 401441.
Arnal, R.E., and Conomos, T.J. Sedimentary and foraminiferal aspects of southern San Francisco Bay. Geological Society of America Special Paper 73, (1962). 2122.
Arnal, R.E., Quinterno, P.J., Conomos, T.J., and Gram, R. Trends in the distribution of recent foraminifera in San Francisco Bay. Cushman Foundation for Foraminiferal Research Special Publication 19, (1980). 1739.
Atwater, B.F. Ancient processes at the site of southern San Francisco Bay: movement of the crust and changes in sea level. San Francisco Bay: The Urbanized Estuary. (1979). AAAS, San Francisco.
Bandy, O.L. Ecology and paleoecology of some California foraminifera, Part I. Journal of Paleontology. 27, (1953). 161182.
Bernhard, J.M. Distinguishing live from dead foraminifera: methods review and proper applications. Micropaleontology 46, Supplement 1 (2000). 3846.
Byrne, R., Ingram, B.L., Starratt, S., Malamud-Roam, F., Collins Joshua, J., and Conrad, M. Carbon-isotope, diatom, and pollen evidence for late Holocene salinity change in a brackish marsh in the San Francisco Estuary. Quaternary Research 55, 1 (2001). 6676.
Collins, E.S., Scott, D.B., Gayes, P.T., and Medioli, F.S. Foraminifera in Winyah Bay and North Inlet marshes, South Carolina: relationship to local pollution sources. Journal of Foraminiferal Research 25, 3 (1995). 212223.
Conomos, T.J. San Francisco Bay: The Urbanized Estuary. Investigations into the Natural History of San Francisco Bay and Delta With Reference to the Influence of Man (1979). Pacific Division of the American Association for the Advancement of Science, San Francisco.
Conomos, T.J., Smith, R.E., and Gartner, J.W. Environmental setting of San Francisco Bay California, USA. Hydrobiologia 129, 1 (1985). 112.
Danovaro, R., Fabniano, M., and Vincx, M. Meiofauna response to the Agip Abruzzo Oil Spill in subtidal sediments of the Ligurian Sea. Marine Pollution Bulletin 30, 2 (1995). 133145.
Erskian, M.G., and Lipps, J.H. Population dynamics of the foraminiferan Glabratella ornatissima (Cushman) in northern California [USA]. Journal of Foraminiferal Research 17, 3 (1987). 240256.
Fagan, B.M. Before California: an archaeologist looks at our earliest inhabitants. (2004). Alta Mira Press, Walnut Creek, California. Revised edition, 399 pp.
Finger, K.L., Lipps, J.H., Weaver, J.C.B., and Miller, P.L. Biostratigraphy and depositional environments of calcareous microfossils in the lower Monterey Formation (Lower to Middle Miocene), Graves Creek area, central California [USA]. Micropaleontology 36, 1 (1990). 155.
Galbraith, H., Jones, R., Park, R., Clough, J., Herrod-Julius, S., Harrington, B., and Page, G. Global climate change and sea level rise: potential losses of intertidal habitat for shorebirds. Waterbirds 25, 2 (2002). 173183.
Hallock, P. Symbiont-bearing foraminifera: harbingers of global change?. Micropaleontology (New York) 46, Supplement 1 (2000). 95104.
Hayek, L.A.C., and Buzas, M.A. Survyeing Natural Populations. (1997). Columbia University Press, New York.
Hurlbert, S.H. The nonconcept of species diversity: a critique and alternative parameters. Ecology 52, 4 (1971). 577586.
Ingle, J.C. Jr. Late Neogene paleobathymetry and paleoenvironments of Humboldt Basin, northern California. The Neogene symposium. Ter Best, H., Wornardt, W.W. Pacific Section, Soc. Econ. Paleont. Mineral. San Francisco, California (1976). 5381.
Ingram, B.L. Differences in radiocarbon age between shell and charcoal from a Holocene shellmound in northern California. Quaternary Research (Orlando) 49, 1 (1998). 102110.
Ingram, B.L., and Ingle, J.C. Strontium isotope ages of the Marine Merced Formation, near San Francisco, California. Quaternary Research (Orlando) 50, 2 (1998). 194199.
Ingram, B.L., and Sloan, D. Strontium isotopic composition of estuarine sediments as paleosalinity–paleoclimate indicator. Science 255, (1992). 6872.
Keldsen, T.J., and Wilson, K.R. The potential impacts of climate change on California clapper rail habitat. Bulletin of the Ecological Society of America 78, 4 SUPPL. (1997). 122
Kennish, M.J. Coastal salt marsh systems in the U.S.: a review of anthropogenic impacts. Journal of Coastal Research 17, 3 (2001). 731748.
Langer, M., and Long, D.J. Association of benthic foraminifera with a gammarid amphipod on tidal flats of San Francisco Bay, California. Journal of Coastal Research 10, 4 (1994). 877883.
Lankford, R.R., and Phleger, F.B. Foraminifera from the nearshore turbulent zone, western North America. Journal of Foraminiferal Research 3, 3 (1973). 101132.
Lesen, A.E. Relationship between benthic foraminifera and food resources in South San Francisco Bay, USA. Marine Ecology Progress Series 297, (2005). 131145.
Lieberman, B.S. Topics in Geobiology. Paleobiogeography: Using Fossils to Study Global Change, Plate Tectonics, and Evolution. (2000). Plenum Publishing Corporation, New York.
Lindberg, D.R., and Lipps, J.H. Reading the Chronicle of Quaternary Temperate Rocky-Shore Faunas, pp. 161–182. Jablonski, D., Erwin, D., and Lipps, J.H. Evolutionary Paleobiology. (1996). Univ. Chicago Press,
Locke, J.L. Sedimentation and foraminiferal aspects on the recent sediments of San Pablo Bay. (1971). San Jose State University, San Jose, California. 100
Malamud-Roam, F., and Ingram, B.L. Carbon isotopic compositions of plants and sediments of tide marshes in the San Francisco Estuary. Journal of Coastal Research 17, 1 (2001). 1729.
Martinson, D.G., Pisias, N.G., Hays, J.D., Imbrie, J., Moore, T.C.J., and Shackleton, N.J. Age dating and the orbital theory of the Ice Ages: development of a high resolution 0 to 300,000-year chronostratigraphy. Quaternary Research 27, (1987). 129.
McCormick, J.M., Severin, K.P., and Lipps, J.H. Summer and winter distribution of foraminifera in Tomales Bay, northern California. Cushman Foundation for Foraminiferal Research Special Publication 32, (1994). 69101.
McDonald, J.A., and Diediker, P.L. A preliminary report on the foraminifera of San Francisco Bay, California. Micropaleontology Bulletin 2, (1930). 3337.
McGann, M. Vertical distribution of foraminifers, including the non-indigenous species Trochammina hadai, in south San Francisco Bay. Fourth Biennial State of the Estuary Conference. (1999). 77
McGann, M. High-resolution faunal, isotopic, and trace metal records from Holocene estuarine deposits of San Francisco Bay, California. Journal of Coastal Research 24, 5 (2008). 10921109.
McGann, M., and Sloan, D. Recent introduction of the foraminifer Trochammina hadai Uchio into San Francisco Bay, California, USA. Marine Micropaleontology 28, 1 (1996). 13.
McGann, M., Sloan, D., and Cohen, A.N. Invasion by a Japanese marine microorganism in western North America. Hydrobiologia 421, 1–3 (2000). 2530. (Type D 1 AB to see abstract)
McKinney, M.L., Lockwood, J.L., and Frederick, D.R. Does ecosystem and evolutionary stability include rare species?. Palaeogeography, Palaeoclimatology, Palaeoecology 127, 1–4 (1996). 191207.
Means, K.D. Sediments and Foraminifera of Richardson Bay, California. (1965). University of Southern California, Los Angeles, California. 83
Nagy, J., and Alve, E. Temporal changes in foraminiferal faunas and impact of pollution in Sandebukta, Oslo Fjord [Norway]. Marine Micropaleontology 12, 2 (1987). 109128.
Natland, M.L. Paleoecology of West Coast Tertiary sediments. Geological Society of America Memoir 67, (1957). 543572.
Pataki, D.E. Atmospheric CO2, climate and evolution: lessons from the past. The New Phytologist 154, 1 (2002). 1012.
Patrick, W.H.J., and Delaune, R.D. Subsidence accretion and sea level rise in South San Francisco Bay California USA Marshes. Limnology and Oceanography 35, 6 (1990). 13891395.
Phleger, F.B. Ecology and Distribution of Recent Foraminifera. (1960). The Johns Hopkins Press, Baltimore.
Phleger, F.B., and Ewing, G.C. Sedimentology and oceanography of coastal lagoons in Baja California. Mexico. Geological Society of America Bulletin 73, (1962). 145182.
Quinterno, P.J. Distribution of recent foraminifera in Central and South San Francisco Bay. Department of Geology. (1968). San Jose State College, San Jose. 83
Resig, J.M., Ming, K., and Miyake, S. Foraminiferal ecology, Ala Wai Canal, Hawai'i. Pacific Science 49, 4 (1995). 341366.
Setty, M.G.A.P., and Nigam, R. Benthic foraminifera as pollution indices in the marine environment of west coast of India. Rivista Italiana di Paleontologia e Stratigrafia 89, 3 (1984). 421436.
Slater, R.A. Sedimentary environments in Suisun Bay, California. (1965). University of Southern California, Los Angeles, California. 101
Sliter, W.V. Cretaceous planktic foraminiferal biostratigraphy of the Calera Limestone, northern California, USA. Journal of Foraminiferal Research 29, 4 (1999). 318339.
Sloan, D. Foraminifera of Sangamon(?) estuarine deposits beneath Central San Francisco Bay, California. Quaternary Depositional Environments of the Pacific Coast, Pacific Coast Paleogeography Symposium 4, (1980). 112.
Sloan, D. Ecostratigraphic Study of Sangamon Sediments beneath Central San Francisco Bay. Department of Paleontology. (1981). University of California, Berkeley, California. 338
Sloan, D. The Yerba Buena mud; record of the last-interglacial predecessor of San Francisco Bay, California. Geological Society of America Bulletin 104, 6 (1992). 716727.
Sloan, D. Use of foraminiferal biostratigraphy in mitigating pollution and seismic problems, San Francisco, California. Journal of Foraminiferal Research 25, 3 (1995). 260266.
Stewart, R.E., and Stewart, K.C. Notes on the foraminifera of the type Merced at Seven Mile Beach, San Mateo County, California. San Diego Natural History Transactions 7, 21 (1933). 259272.
Thierstein, H.R. Paleooceanography global change in the history of the Earth. Vierteljahrsschrift der Naturforschenden Gesellschaft in Zuerich 132, 2 (1987). 88103.
Travis, J., and Futuyma, D.J. Global Change: Lessons from and for Evolutionary Biology. Kareiva, P.M., Kingsolver, J.G., and Huey, R.B. Biotic interactions and global change. (1993). Sinauer Associates, Inc., Sunderland, MA. 251261.
Tsujimoto, A., Nomura, R., Yasuhara, M., Yamazaki, H., and Yoshikawa, S. Impact of eutrophication on shallow marine benthic foraminifers over the last 150 years in Osaka Bay, Japan. Marine Micropaleontology 60, 4 (2006). 258268.
Uchio, T. Ecology of living benthic foraminifera from the San Diego, California area. Cushman Foundation for Foraminiferal Research Special Publication 5, (1960). 172.
USGS San Francisco Bay Water Quality data. (2003). USGS, Menlo Park, CA. http://sfbay.wr.usgs.gov/access/wqdata/index.html
van Geen, A., and Luoma, S.N. The impact of human activities on sediments of San Francisco Bay, California: an overview. Marine Chemistry 64, 1–2 (1999). 16.
van Geen, A., and Luoma, S.N. A record of estuarine water contamination from the Cd content of foraminiferal tests in San Francisco Bay, California. Marine Chemistry 64, 1–2 (1999). 5769.
van Geen, A., Luoma, S.N., Fuller, C.C., Anima, R., Clifton, H.E., and Trumbore, S. Evidence from cadmium calcium ratios in foraminifera for greater upwelling off California 4000 years ago. Nature (London) 358, 6381 (1992). 5456.
Wagner, D.B. Environmental history of San Francisco Bay with emphasis on foraminifera paleontology and clay minerology. Department of Paleontology. (1978). University of California, Berkeley. 274
Whitfield, A.K. Fish species diversity in Southern African estuarine systems: an evolutionary perspective. Environmental Biology of Fishes 40, 1 (1994). 3748.
Yanko, V., Ahmad, M., and Kaminski, M. Morphological deformities of benthic foraminiferal tests in response to pollution by heavy metals: implications for pollution monitoring. Journal of Foraminiferal Research 28, 3 (1998). 177200.
Yanko, V., Kronfeld, J., and Flexer, A. Response of benthic foraminifera to various pollution sources: implications for pollution monitoring. Journal of Foraminiferal Research 24, 1 (1994). 117.
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