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This study evaluated the impact of four cover crop species and their termination timings on cover crop biomass, weed control, and corn yield. A field experiment was arranged in a split-plot design in which cover crop species (wheat, cereal rye, hairy vetch, and rapeseed) were the main plot factor, and termination timings [4, 2, 1, and 0 wk before planting corn (WBP)] was the subplot factor. In both years (2021 and 2022), hairy vetch produced the most biomass (5,021 kg ha–1) among cover crop species, followed by cereal rye (4,387 kg ha–1), wheat (3,876 kg ha–1), and rapeseed (2,575 kg ha–1). Regression analysis of cover crop biomass with accumulated growing degree days (AGDDs) indicated that for every 100 AGDD increase, the biomass of cereal rye, wheat, hairy vetch, and rapeseed increased by 880, 670, 780, and 620 kg ha–1, respectively. The density of grass and small-seeded broadleaf (SSB) weeds at 4 wk after preemergence herbicide (WAPR) application varied significantly across termination timings. The grass and SSB weed densities were 56% and 36% less at 0 WBP compared with 2 WBP, and 67% and 61% less compared with 4 WBP. The sole use of a roller-crimper did not affect the termination of rapeseed at 0 WBP and resulted in the least corn yield (3,046 kg ha–1), whereas several different combinations of cover crops and termination timings resulted in greater corn yield. In conclusion, allowing cover crops to grow longer in the spring offers more biomass for weed suppression and impacts corn yield.
Distinguishing early domesticates from their wild progenitors presents a significant obstacle for understanding human-mediated effects in the past. The origin of dogs is particularly controversial because potential early dog remains often lack corroborating evidence that can provide secure links between proposed dog remains and human activity. The Tumat Puppies, two permafrost-preserved Late Pleistocene canids, have been hypothesized to have been littermates and early domesticates due to a physical association with putatively butchered mammoth bones. Through a combination of osteometry, stable isotope analysis, plant macrofossil analysis, and genomic and metagenomic analyses, this study exploits the unique properties of the naturally mummified Tumat Puppies to examine their familial relationship and to determine whether dietary information links them to human activities. The multifaceted analysis reveals that the 14,965–14,046 cal yr BP Tumat Puppies were littermates who inhabited a dry and relatively mild environment with heterogeneous vegetation and consumed a diverse diet, including woolly rhinoceros in their final days. However, because there is no evidence of mammoth consumption, these data do not establish a link between the canids and ancient humans.
It remains unclear which individuals with subthreshold depression benefit most from psychological intervention, and what long-term effects this has on symptom deterioration, response and remission.
Aims
To synthesise psychological intervention benefits in adults with subthreshold depression up to 2 years, and explore participant-level effect-modifiers.
Method
Randomised trials comparing psychological intervention with inactive control were identified via systematic search. Authors were contacted to obtain individual participant data (IPD), analysed using Bayesian one-stage meta-analysis. Treatment–covariate interactions were added to examine moderators. Hierarchical-additive models were used to explore treatment benefits conditional on baseline Patient Health Questionnaire 9 (PHQ-9) values.
Results
IPD of 10 671 individuals (50 studies) could be included. We found significant effects on depressive symptom severity up to 12 months (standardised mean-difference [s.m.d.] = −0.48 to −0.27). Effects could not be ascertained up to 24 months (s.m.d. = −0.18). Similar findings emerged for 50% symptom reduction (relative risk = 1.27–2.79), reliable improvement (relative risk = 1.38–3.17), deterioration (relative risk = 0.67–0.54) and close-to-symptom-free status (relative risk = 1.41–2.80). Among participant-level moderators, only initial depression and anxiety severity were highly credible (P > 0.99). Predicted treatment benefits decreased with lower symptom severity but remained minimally important even for very mild symptoms (s.m.d. = −0.33 for PHQ-9 = 5).
Conclusions
Psychological intervention reduces the symptom burden in individuals with subthreshold depression up to 1 year, and protects against symptom deterioration. Benefits up to 2 years are less certain. We find strong support for intervention in subthreshold depression, particularly with PHQ-9 scores ≥ 10. For very mild symptoms, scalable treatments could be an attractive option.
Ocean radiocarbon (14C) is a proxy for air-sea exchange, vertical and horizontal mixing, and water mass identification. Here, we present five pre- to post-bomb coral Δ14C records from West Flower Garden Bank and Santiaguillo reefs in the Gulf of Mexico, Boca de Medio, and Isla Tortuga near the Cariaco Basin north of Venezuela. To assess basin-wide Δ14C variability, we compiled the Atlantic Ocean reef-building surface coral Δ14C records (24 corals and 28 data sets in total) with these new records. Cumulatively, the Δ14C records, on their independent age models, reveal the onset of post-bomb Δ14C trends in 1958 ±1 to 2 years. A general decrease in maximum Δ14C values occurs with decreasing latitude reflecting the balance between air-sea gas exchange and surface water residence time, vertical mixing, and horizontal advection. A slightly larger atmospheric imprint in the northern sites and relatively greater vertical mixing and/or advection of low-14C waters influence the southern Caribbean and eastern Atlantic sites. The eastern Atlantic sites, due to upwelling, have the lowest post-bomb Δ14C values. Equatorial currents from the eastern Atlantic transport low Δ14C water towards the western South Atlantic and southern Caribbean sites. Decadal Δ14C averages for the pre-bomb interval (1750–1949) for the low latitude western Atlantic are relatively constant within analytical (3–5‰) and chronological uncertainties (∼1–2 years) due to mixing and air-sea exchange. The compiled Δ14C records provide updated regional marine Δ14C values for marine reservoir corrections.
The stellar age and mass of galaxies have been suggested as the primary determinants for the dynamical state of galaxies, with environment seemingly playing no or only a very minor role. We use a sample of 77 galaxies at intermediate redshift ($z\sim0.3$) in the Middle-Ages Galaxies Properties with Integral field spectroscopy (MAGPI) Survey to study the subtle impact of environment on galaxy dynamics. We use a combination of statistical techniques (simple and partial correlations and principal component analysis) to isolate the contribution of environment on galaxy dynamics, while explicitly accounting for known factors such as stellar age, star formation histories, and stellar masses. We consider these dynamical parameters: high-order kinematics of the line-of-sight velocity distribution (parametrised by the Gauss-Hermite coefficients $h_3$ and $h_4$), kinematic asymmetries $V_{\textrm{asym}}$ derived using kinemetry, and the observational spin parameter proxy $\lambda_{R_e}$. Of these, the mean $h_4$ is the only parameter found to have a significant correlation with environment as parametrised by group dynamical mass. This correlation exists even after accounting for age and stellar mass trends. We also find that satellite and central galaxies exhibit distinct dynamical behaviours, suggesting they are dynamically distinct classes. Finally, we confirm that variations in the spin parameter $\lambda_{R_e}$ are most strongly (anti-)correlated with age as seen in local studies, and show that this dependence is well-established by $z\sim0.3$.
This work presents visual morphological and dynamical classifications for 637 spatially resolved galaxies, most of which are at intermediate redshift ($z\sim0.3$), in the Middle-Ages Galaxy Properties with Integral field spectroscopy (MAGPI) Survey. For each galaxy, we obtain a minimum of 11 independent visual classifications by knowledgeable classifiers. We use an extension of the standard Dawid-Skene bayesian model introducing classifier-specific confidence parameters and galaxy-specific difficulty parameters to quantify classifier confidence and infer reliable statistical confidence estimates. Selecting sub-samples of 86 bright ($r\lt20$ mag) high-confidence ($\gt0.98$) morphological classifications at redshifts ($0.2 \le z \le0.4$), we confirm the full range of morphological types is represented in MAGPI as intended in the survey design. Similarly, with a sub-sample of 82 bright high-confidence stellar kinematic classifications, we find that the rotating and non-rotating galaxies seen at low redshift are already in place at intermediate redshifts. We do not find evidence that the kinematic morphology–density relation seen at $z\sim0$ is established at $z\sim0.3$. We suggest that galaxies without obvious stellar rotation are dynamically pre-processed sometime before $z\sim0.3$ within lower mass groups before joining denser environments.
To compare rates of clinical response in children with Clostridioides difficile infection (CDI) treated with metronidazole vs vancomycin.
Design:
Retrospective cohort study was performed as a secondary analysis of a previously established prospective cohort of hospitalized children with CDI. For 187 participants 2–17 years of age who were treated with metronidazole and/or vancomycin, the primary outcome of clinical response (defined as resolution of diarrhea within 5 days of treatment initiation) was identified retrospectively. Baseline variables associated with the primary outcome were included in a logistic regression propensity score model estimating the likelihood of receiving metronidazole vs vancomycin. Logistic regression using inverse probability of treatment weighting (IPTW) was used to estimate the effect of treatment on clinical response.
Results:
One hundred seven subjects received metronidazole and 80 subjects received vancomycin as primary treatment. There was no univariable association between treatment group and clinical response; 78.30% (N = 83) of the metronidazole treatment group and 78.75% (N = 63) of the vancomycin group achieved clinical response (P = 0.941). After adjustment using propensity scores with IPTW, the odds of a clinical response for participants who received metronidazole was 0.554 (95% CI: 0.272, 1.131) times the odds of those who received vancomycin (P = 0.105).
Conclusions:
In this observational cohort study of pediatric inpatients with CDI, the rate of resolution of diarrhea after 5 days of treatment did not differ among children who received metronidazole vs vancomycin.
Acquired chylothorax is an established complication of CHD surgery, affecting 2–9% of patients. CHD places a child at risk for failure to thrive, with subsequent chylothorax imposing additional risk.
Objective:
We conducted a retrospective chart review to ascertain quantitative markers of nutrition and growth in children affected by chylothorax following CHD surgery between 2018 and 2022 compared to controls.
Methods:
We utilised electronic medical record system, EPIC, at Children’s Hospital, New Orleans, targeting subjects < 18 years old who underwent CHD surgery between 2018 and 2022 and developed a subsequent chylothorax. Study subjects were identified using the 10th revision of the International Classification of Diseases codes (ICD-10 codes: J94.0, I89.8, and J90.0). Each chylothorax case (n = 20) was matched by procedure type and age to a control with no chylothorax (n = 20). Data were recorded in REDCap and analysed using SPSS.
Results:
After removal of outliers, we analysed 19 total matched pairs. There was no statistical difference in growth velocity (p = 0.12), weight change (operation to discharge) (p = 0.95), weight change (admission to discharge) (p = 0.35), Z-score change (operation to discharge) (p = 0.90), Z-score change (admission to discharge) (p = 0.21), serum protein (p = 0.88), or serum albumin (p = 0.82). Among cases, linear regression demonstrated no significant association between maximum chylous output and growth velocity (p = 0.91), weight change (operation to discharge) (p = 0.15), or weight change (admission to discharge) (p = 0.98).
Conclusions:
We did not observe statistically significant markers of growth or nutrition in children with chylothorax post-CHD surgery compared to those without chylothorax. Multisite data collection and analysis is required to better ascertain clinical impact and guide clinical practice.
A concept for a femtosecond pulse compressor based on underdense plasma prisms is presented. An analytical model is developed to calculate the spectral phase incurred and the expected pulse compression. A 2D particle-in-cell simulation verifies the analytical model. Simulated intensities (${\sim} {10}^{16}$ W/cm2) were orders of magnitude higher than the damage threshold for conventional gratings used in chirped pulse amplification. Theoretical geometries for compact (tens of cm scale) compressors for 1, 10 and 100 PW power levels are proposed.
Lewy body dementias (LBD) are the second most common dementia. Several genes have been associated with LBD, but little is known about their contributions to LBD pathophysiology. Each gene may transcribe multiple RNA, and LBD brains have extensive RNA splicing dysregulation. Hence, we completed the first transcriptome-wide transcript-level differential expression analysis of post-mortem LBD brains for gaining more insights into LBD molecular pathology that are essential for facilitating discovery of novel therapeutic targets and biomarkers for LBD. We completed transcript-level quantification of next-generation RNA-sequencing data from post-mortem anterior cingulate (ACC) and dorsolateral prefrontal cortices (DLPFC) of people with pathology-verified LBD (LBD = 14; Controls = 7) using Salmon. We identified differentially expressed transcripts (DET) using edgeR and investigated their functional implications using DAVID. We performed transcriptome-wide alternative splicing analysis using DRIMseq. We identified 74 DET in ACC and 96 DET in DLPFC after Benjamini-Hochberg false discovery rate (FDR) correction (5%). There were 135 and 98 FDR-corrected alternatively spliced genes in ACC and DLPFC of LBD brains, respectively. Identified DET may contribute to LBD pathology by altering DNA repair, apoptosis, neuroplasticity, protein phosphorylation, and regulation of RNA transcription. We confirm widespread alternative splicing and absence of chronic neuroinflammation in LBD brains. Transcript-level differential expression analysis can reveal specific DET that cannot be detected by gene-level expression analyses. Therapeutic and diagnostic biomarker potential of identified DET, especially those from TMEM18, MICB, MPO, and GABRB3, warrant further investigation. Future LBD blood-based biomarker studies should prioritise measuring the identified DET in small extracellular vesicles.
Procedure duration is an important predictor of patient outcomes in surgery. However, the relationship between procedure duration and adverse events in congenital cardiac catheterization is largely unexplored.
Methods:
All cases entered into the Congenital Cardiac Catheterization Project on Outcomes from 2014 to 2017 were included. Cases were ordered from shortest to longest case length, minus time spent managing adverse events, for each case type. The outcomes, Level 3bc/4/5 and 4/5 adverse event rates, were calculated for cases above and below the 75th percentile for case length. To identify an independent relationship between case length and outcomes, the case length percentile was added to the CHARM II risk model.
Results:
Among 14,704 catheterizations, longer cases (>75th percentile for case length) had Level 4/5 rates that were 2.2% and 2.7% compared to cases ≤75th percentile with adverse event rates of 0.9% and 1.4% for diagnostic and interventional cases, respectively. Level 3bc/4/5 rates were 5.0% and 8.4% in longer cases compared to 2.4% and 5.4% for diagnostic and interventional cases, respectively. After adding case length to the CHARM II risk model, case length 50th–75th percentile had an odds ratio (OR) of 1.4, 75th–90th percentile an OR of 1.56, and >90th percentile an OR of 2.24 as compared to cases with case length <50th percentile (p ≤ 0.001 for all).
Conclusions:
Longer case lengths are associated with clinically important and life-threatening adverse events in congenital cardiac catheterization, even after accounting for known risk factors. Case length may be an important target for future quality improvement work.
Vaccines have revolutionised the field of medicine, eradicating and controlling many diseases. Recent pandemic vaccine successes have highlighted the accelerated pace of vaccine development and deployment. Leveraging this momentum, attention has shifted to cancer vaccines and personalised cancer vaccines, aimed at targeting individual tumour-specific abnormalities. The UK, now regarded for its vaccine capabilities, is an ideal nation for pioneering cancer vaccine trials. This article convened experts to share insights and approaches to navigate the challenges of cancer vaccine development with personalised or precision cancer vaccines, as well as fixed vaccines. Emphasising partnership and proactive strategies, this article outlines the ambition to harness national and local system capabilities in the UK; to work in collaboration with potential pharmaceutic partners; and to seize the opportunity to deliver the pace for rapid advances in cancer vaccine technology.
In Coombs' unidimensional unfolding theory each individual ranks all stimuli, often in terms of preference judgments. These ranks, called I scales, are used to infer the latent continuum called a J scale which is presumed to have generated the I scale rankings. A major problem concerns the inference of the J scale given a set of I scales because an I scale is not unique to any one J scale. This paper presents a procedure for estimating J scale probabilities given a set of I scales. Models for three and four or more stimuli are presented. Results of computer tests are reported.
This paper treats the problem of testing an ordered hypothesis based on the ranks of the data. The statistical procedures for the randomized block design with more than one observation per cell are derived. Multiple comparisons and estimation procedures are also included.
This paper develops a unified approach, based on ranks, to the statistical analysis of data arising from complex experimental designs. In this way we answer a major objection to the use of rank procedures as a major methodology in data analysis. We show that the rank procedures, including testing, estimation and multiple comparisons, are generated in a natural way from a robust measure of scale. The rank methods closely parallel the familiar methods of least squares, so that estimates and tests have natural interpretations.
We study the mixing time of the single-site update Markov chain, known as the Glauber dynamics, for generating a random independent set of a tree. Our focus is obtaining optimal convergence results for arbitrary trees. We consider the more general problem of sampling from the Gibbs distribution in the hard-core model where independent sets are weighted by a parameter $\lambda \gt 0$; the special case $\lambda =1$ corresponds to the uniform distribution over all independent sets. Previous work of Martinelli, Sinclair and Weitz (2004) obtained optimal mixing time bounds for the complete $\Delta$-regular tree for all $\lambda$. However, Restrepo, Stefankovic, Vera, Vigoda, and Yang (2014) showed that for sufficiently large $\lambda$ there are bounded-degree trees where optimal mixing does not hold. Recent work of Eppstein and Frishberg (2022) proved a polynomial mixing time bound for the Glauber dynamics for arbitrary trees, and more generally for graphs of bounded tree-width.
We establish an optimal bound on the relaxation time (i.e., inverse spectral gap) of $O(n)$ for the Glauber dynamics for unweighted independent sets on arbitrary trees. We stress that our results hold for arbitrary trees and there is no dependence on the maximum degree $\Delta$. Interestingly, our results extend (far) beyond the uniqueness threshold which is on the order $\lambda =O(1/\Delta )$. Our proof approach is inspired by recent work on spectral independence. In fact, we prove that spectral independence holds with a constant independent of the maximum degree for any tree, but this does not imply mixing for general trees as the optimal mixing results of Chen, Liu, and Vigoda (2021) only apply for bounded-degree graphs. We instead utilize the combinatorial nature of independent sets to directly prove approximate tensorization of variance via a non-trivial inductive proof.
Research suggests that most mental health conditions have their onset in the critically social period of adolescence. Yet, we lack understanding of the potential social processes underlying early psychopathological development. We propose a conceptual model where daily-life social interactions and social skills form an intermediate link between known risk and protective factors (adverse childhood experiences, bullying, social support, maladaptive parenting) and psychopathology in adolescents – that is explored using cross-sectional data.
Methods
N = 1913 Flemish adolescent participants (Mean age = 13.8; 63% girls) were assessed as part of the SIGMA study, a large-scale, accelerated longitudinal study of adolescent mental health and development. Self-report questionnaires (on risk/protective factors, social skills, and psychopathology) were completed during class time; daily-life social interactions were measured during a subsequent six-day experience-sampling period.
Results
Registered uncorrected multilevel linear regression results revealed significant associations between all risk/protective factors and psychopathology, between all risk/protective factors and social processes, and between all social processes and psychopathology. Social processes (social skills, quantity/quality of daily social interactions) were uniquely predicted by each risk/protective factor and were uniquely associated with both general and specific types of psychopathology. For older participants, some relationships between social processes and psychopathology were stronger.
Conclusions
Unique associations between risk/protective factors and psychopathology signify the distinct relevance of these factors for youth mental health, whereas the broad associations with social processes support these processes as broad correlates. Results align with the idea of a social pathway toward early psychopathology, although follow-up longitudinal research is required to verify any mediation effect.
Information regarding the prevalence and distribution of herbicide-resistant waterhemp [Amaranthus tuberculatus (Moq.) Sauer] in Minnesota is limited. Whole-plant bioassays were conducted in the greenhouse on 90 A. tuberculatus populations collected from 47 counties in Minnesota. Eight postemergence herbicides, 2,4-D, atrazine, dicamba, fomesafen, glufosinate, glyphosate, imazamox, and mesotrione, were applied at 1× and 3× the labeled doses. Based on their responses, populations were classified into highly resistant (≥40 % survival at 3× the labeled dose), moderately resistant (<40% survival at 3× the labeled dose but ≥40% survival at 1× the labeled dose), less sensitive (10% to 39% survival at 1× the labeled dose), and susceptible (<10% survival at 1× the labeled dose) categories. All 90 populations were resistant to imazamox, while 89% were resistant to glyphosate. Atrazine, fomesafen, and mesotrione resistance was observed in 47%, 31%, and 22% of all populations, respectively. Ten percent of the populations were resistant to 2,4-D, and 2 of 90 populations exhibited >40% survival following dicamba application at the labeled dose. No population was confirmed to be resistant to glufosinate. However, 22% of all populations were classified as less sensitive to glufosinate. Eighty-two populations were found to be multiple-herbicide resistant. Among these, 15 populations exhibited resistance to four different herbicide sites of action (SOAs); 7 and 4 populations were resistant to five and six SOAs, respectively. All six-way-resistant populations were from southwest Minnesota. Two populations, one from Lincoln County and the other from Lyon County, were resistant to 2,4-D, atrazine, dicamba, fomesafen, glyphosate, imazamox, and mesotrione, leaving only glufosinate as a postemergence control option for these populations in corn (Zea mays L.) and soybean [Glycine max (L.) Merr.]. Diversified management tactics, including nonchemical control measures along with herbicide applications from effective SOAs, should be implemented to slow down the evolution and spread of herbicide-resistant A. tuberculatus populations.
The Ethics Committee at Memorial Sloan Kettering Cancer Center (MSK) developed a Bioethics Ambassador Program (BAP); a yearlong educational program to assist clinical and non-clinical staff develop the skills to identify and address common burgeoning ethical issues that can arise during the provision of care to patients with cancer. The goal was to provide greater awareness of the role and services of Ethics, particularly at the institution’s geographically-diverse outpatient care centers and to better-instill a culture of preventative ethics. This article discusses the design and implementation of the first two years of the program and analyzes its strengths, weaknesses, and impact on MSK.