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10 - Fragmentation, connectivity and fish species persistence in freshwater ecosystems

Published online by Cambridge University Press:  05 December 2015

Keith B. Gido
Affiliation:
Kansas State University
James E. Whitney
Affiliation:
Pittsburgh State University
Joshuah S. Perkin
Affiliation:
Tennessee Tech University
Thomas F. Turner
Affiliation:
University of New Mexico
Gerard P. Closs
Affiliation:
University of Otago, New Zealand
Martin Krkosek
Affiliation:
University of Toronto
Julian D. Olden
Affiliation:
University of Washington
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Summary

OVERVIEW

Fragmentation poses one of the greatest threats to freshwater fish biodiversity (Nilsson et al., 2005; Reidy-Liermann et al., 2012). Whereas damming of large rivers is perhaps the most obvious form of fragmentation (e.g., Nilsson et al., 2005), smaller, semipermeable barriers such as road crossings (Perkin & Gido, 2012) or water withdrawals that dry sections of a river network (Falke et al., 2011) also pose a conservation challenge. In glacial regions, lakes that are naturally connected through waterways are increasingly being isolated by summer evaporation and groundwater loss (Baki et al., 2012). Climate and land-use changes also isolate populations in headwater reaches by increasing temperatures (Rahel et al., 1996) or drying of streams (Falke et al., 2011) in downstream reaches. Finally, barriers can form when the occurrence of a species, such as a large predator, inhibits the movement of prey through a dispersal corridor (Fraser et al., 1995). This severing of connectivity in aquatic habitats affects species persistence through multiple stressors (Chapters 4 and 6) including limiting dispersal necessary to fulfil important life stages, exacerbating negative species interactions, and inhibiting recolonisation following disturbance. Barriers to movement isolate small populations leading to reduced genetic diversity (Chapter 16) and potentially compromise long-term population persistence (e.g. Wofford et al., 2005).

In this chapter, we discuss how fragmentation disrupts dispersal and migration of freshwater fishes and the long-term consequences for population diversity and stability. We begin with a global overview of the problem followed by a review of theoretical and empirical methods for quantifying the effects of fragmentation on population viability. We conclude with a discussion of conservation challenges along with future research and management recommendations. The primary tenet of our review is that persistence of species in fragmented systems is dependent on the nature of barriers to dispersal and ecological traits of species, particularly their ability to complete critical life-history stages within fragmented habitats (Figure 10.1). We often refer to the terms fragmentation, isolation and connectivity. Whereas there are instances where these might be used interchangeably, we consider fragmentation to represent habitats that have been partitioned into smaller habitats and by extension result in smaller populations. The terms connectivity and isolation refer to the ability or lack of ability, respectively, of fishes to disperse into or out of particular habitats.

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Publisher: Cambridge University Press
Print publication year: 2015

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References

Alò, D. & Turner, T. F. (2005). Effects of habitat fragmentation on effective population size in the endangered Rio Grande silvery minnow. Conservation Biology, 19, 1138–1148.CrossRefGoogle Scholar
Anderson, G. B., Freeman, M. C., Freeman, B. J., et al. (2012). Dealing with uncertainty when assessing fish passage through culvert road crossings. Environmental Management, 50, 462–477.CrossRefGoogle ScholarPubMed
Agostinho, A. A., Marques, E. E., Agostinho, C. S., et al. (2007). Fish ladder of Lajeado Dam: migrations on one-way routes?Neotropical Ichthyology, 5, 121–130.CrossRefGoogle Scholar
Avise, J. C. (1992). Molecular population structure and the biogeographic history of a regional fauna: a case history with lessons for conservation biology. Oikos, 63, 62–76.CrossRefGoogle Scholar
Bain, M. B. & Wine, M. L. (2010). Testing predictions of stream landscape theory for fish assemblages in highly fragmented watersheds. Folia Zoologica, 59, 231–239.CrossRefGoogle Scholar
Baki, A. B., Zhu, D. Z., Courtice, G. & Rajaratnam, N. (2012). Exploring the potential fish pathways in an experimental rocky ramp type nature-like fish pass. In 9th International Symposium on Ecohydraulics 2012 Proceedings. Mader, H. & Kraml, J. (editors).Google Scholar
Beatty, R. J., Rahel, F. J. & Hubert, W. A. (2009). Complex influences of low-head dams and artificial wetlands on fishes in a Colorado River tributary system. Fisheries Management and Ecology, 16, 457–467.CrossRefGoogle Scholar
Blanchet, S., Rey, O., Etienne, R., Lek, S. & Loot, G. (2010). Species-specific responses to landscape fragmentation: implications for management strategies. Evolutionary Applications, 3, 291–304.CrossRefGoogle ScholarPubMed
Bourne, C. M., Kehler, D. G., Wiersma, Y. F. & Cote, D. (2011). Barriers to fish passage and barriers to fish passage assessments: the impact of assessment methods and assumptions on barrier identification and quantification of watershed connectivity. Aquatic Ecology, 45, 389–403.CrossRefGoogle Scholar
Branco, P., Segurado, P., Santos, J. M., Pinheiro, P. & Ferreira, M. T. (2012). Does longitudinal connectivity loss affect the distribution of freshwater fish?Ecological Engineering, 48, 70–78.CrossRefGoogle Scholar
Burdick, S. M. & Hightower, J. E. (2006). Distribution of spawning activity by anadromous fishes in an Atlantic slope drainage after removal of a low-head dam. Transaction of the American Fisheries Society, 135, 1290–1300.CrossRefGoogle Scholar
Burridge, C. P., Craw, D., Fletcher, D. & Waters, J. M. (2008). Geological dates and molecular rates: fish DNA sheds light on time dependency. Molecular Biology and Evolution, 25, 624–633.CrossRefGoogle ScholarPubMed
Catalano, M. J., Bozek, M. A. & Pellet, T. D. (2007). Effects of dam removal on fish assemblage structure and spatial distributions in the Baraboo River, Wisconsin. North American Journal of Fisheries Management, 27, 519–530.CrossRefGoogle Scholar
Chin, A., Laurencio, L. R. & Martinez, A. E. (2008). The hydrologic importance of small- and medium-sized dams: examples from Texas. The Professional Geographer, 60, 238–251.CrossRefGoogle Scholar
Clarkson, R. W., Marsh, P. C. & Dowling, T. E. (2012). Population prioritization for conservation of imperilled warmwater fishes in an arid-region drainage. Aquatic Conservation: Marine and Freshwater Ecosystems, 22, 498–510.CrossRefGoogle Scholar
Cooke, S. J., Paukert, C. P. & Hogan, Z. (2012). Endangered river fish: factors hindering conservation and restoration. Endangered Species Research, 17, 179–191.CrossRefGoogle Scholar
Corander, J., Waldmann, P., Marttinen, P. & Sillanpa, M. J. (2004). BAPS 2: enhanced possibilities for the analysis of genetic population structure. Bioinformatics, 20, 2363–2369.CrossRefGoogle ScholarPubMed
Cote, D., Kehler, D. G., Bourne, C. & Wiersma, Y. F. (2009). A new measure of longitudinal connectivity for stream networks. Landscape Ecology, 24, 101–113.CrossRefGoogle Scholar
Coutant, C. C. & Whitney, R. R. (2000). Fish behavior in relation to passage through hydropower turbines: a review. Transactions of the American Fisheries Society, 129, 351–380.2.0.CO;2>CrossRefGoogle Scholar
Creed, R. P. (2006). Predator transitions in stream communities: a model and evidence from field studies. Journal of the North American Benthological Society, 25, 533–544.CrossRefGoogle Scholar
Dias, M. S., Cornu, J. F., Oberdorff, T., Lasso, C. A. & Tedesco, P. A. (2012). Natural fragmentation in river networks as a driver of speciation for freshwater fishes. Ecography, 35, 1–7.Google Scholar
Dudley, R. K. & Platania, S. P. (2007). Flow regulation and fragmentation imperil pelagic-spawning riverine fishes. Ecological Applications, 17, 2074–2086.CrossRefGoogle ScholarPubMed
Eadie, J. M. & Keast, A. (1984). Resource heterogeneity and fish species diversity in lakes. Canadian Journal of Zoology, 62, 1689–1695.CrossRefGoogle Scholar
Englund, G., Johansson, F., Olofsson, P., Salonsaari, J. & Öhman, J. (2009). Predation leads to assembly rules in fragmented fish communities. Ecology Letters, 12, 663–671.CrossRefGoogle ScholarPubMed
Erös, T., Schmera, D. & Schick, R. S. (2011). Network thinking in riverscape conservation: a graph-based approach. Biological Conservation, 144, 184–192.CrossRefGoogle Scholar
Erös, T., Olden, J. D., Schick, R. S., Schmera, D. & Fortin, M. J. (2012). Characterizing connectivity relationships in freshwaters using patch-based graphs. Landscape Ecology, 27, 303–317.CrossRefGoogle Scholar
Fagan, W. F. (2002). Connectivity, fragmentation, and extinction risk in dendritic metapopulations. Ecology, 83, 3243–3249.CrossRefGoogle Scholar
Falke, J. A. & Fausch, K. D. (2010). From metapopulations to metacommunities: linking theory with empirical observations of the spatial population dynamics of stream fishes. In Community Ecology Of Stream Fishes: Concepts, Approaches, And Techniques. Bethesda, MD:American Fisheries Society Symposium 73, pp. 207–234.Google Scholar
Falke, J. A. & Gido, K. B. (2006). Effects of reservoir connectivity on stream fish assemblages in the Great Plains. Canadian Journal of Fisheries and Aquatic Sciences, 63, 480–493.CrossRefGoogle Scholar
Falke, J. A., Fausch, K. D., Magelky, R., et al. (2011). The role of groundwater pumping and drought in shaping ecological futures for stream fishes in a dryland river basin of the western Great Plains, USA. Ecohydrology, 4, 682–697.CrossRefGoogle Scholar
Fausch, K. D., Torgersen, C. E., Baxter, C. V. & Li, H. W. (2002). Landscapes to riverscapes: bridging the gap between research and conservation of stream fishes. BioScience, 52, 483–498.CrossRefGoogle Scholar
Fausch, K. D., Rieman, B. E., Dunham, J. B., Young, M. K. & Peterson, D. P. (2009). Invasion versus isolation: tradeoffs in managing native salmonids with barriers to upstream movement. Conservation Biology, 23, 859–870.CrossRefGoogle Scholar
Flecker, A. S., McIntyre, P. B., Moore, J. W., et al. (2010). Migratory fishes as material and process subsidies in riverine ecosystems. In Community Ecology of Stream Fishes: Concepts, Approaches, and Techniques. Bethesda, MD:American Fisheries Society Symposium 73, pp. 559–592.Google Scholar
Forman, R. T. & Alexander, L. E. (1998). Roads and their major ecological effects. Annual Reviews in Ecology and Systematics, 29, 207–257.CrossRefGoogle Scholar
Franssen, N. R. (2012). Genetic structure of a native cyprinid in a reservoir-altered stream network. Freshwater Biology, 57, 155–165.CrossRefGoogle Scholar
Fraser, D. F., Gilliam, J. F. & Yip-Hoi, T. (1995). Predation as an agent of population fragmentation in a tropical watershed. Ecology, 76, 1461–1472.CrossRefGoogle Scholar
Fraser, D. J., Lippe, C. & Bernatchez, L. (2004). Consequences of unequal population size, asymmetric gene flow and sex-biased dispersal on population structure in brook charr (Salvelinus fontinalis). Molecular Ecology, 13, 67–80.CrossRefGoogle ScholarPubMed
Fraser, D. J., Hansen, M. M., Ostergaard, S., et al. (2007). Comparative estimation of effective population sizes and temporal gene flow in two contrasting population systems. Molecular Ecology, 16, 3866–3889.CrossRefGoogle ScholarPubMed
Frissell, C. A., Liss, W. J., Warren, C. E. & Hurley, M. D. (1986). A hierarchical framework for stream habitat classification: viewing streams in a watershed context. Environmental Management, 10, 199–214.CrossRefGoogle Scholar
Fullerton, A. H., Burnett, K. M., Steel, E. A., et al. (2010). Hydrological connectivity for riverine fish: measurement challenges and research opportunities. Freshwater Biology, 55, 2215–2237.CrossRefGoogle Scholar
Gaggiotti, O. E. (2003). Genetic threats to population persistence. Annales Zoologici Fennici, 40, 155–168.Google Scholar
Gibson, R. J., Haedrich, R. L. & Wernerheim, C. M. (2005). Loss of fish habitat as a consequence of inappropriately constructed stream crossings. Fisheries, 30, 10–17.CrossRefGoogle Scholar
Gido, K. B. & Brown, J. H. (1999). Invasion of North American drainages by alien fish species. Freshwater Biology, 42, 387–399.CrossRefGoogle Scholar
Gido, K. B. & Jackson, D. A. (Eds). (2010). Community Ecology of Stream Fishes: Concepts, Approaches, and Techniques. Bethesda, MD: American Fisheries Society, Symposium 73.Google Scholar
Gillette, D. P., Tiemann, J. S., Edds, D. R. & Wildhaber, M. L. (2005). Spatiotemporal patterns of fish assemblage structure in a river impounded by low-head dams. Copeia, 2005, 539–549.CrossRefGoogle Scholar
Gilliam, J. F. & Fraser, D. F. (2001). Movement in corridors: enhancement by predation threat, disturbance, and habitat structure. Ecology, 82, 258–273.CrossRefGoogle Scholar
Gilpin, M. E. & Soulé, M. E. (1986). Minimum viable populations: processes of species extinction. In Conservation Biology: The Science of Scarcity and Diversity. Soulé, M. E. (Ed.). Sunderland, MA:Sinauer, pp. 19–34.Google Scholar
Goulding, M. (1980). The fishes and the Forest. Explorations in Amazonian Natural History. Berkeley, CA:University of California Press.Google Scholar
Gowan, C., Young, M. K., Fausch, K. D. & Riley, S. C. (1994). Restricted movement in stream salmonids: a paradigm lost?Canadian Journal of Fisheries and Aquatic Sciences, 51, 2626–2637.CrossRefGoogle Scholar
Grant, E. H. C. (2011). Structural complexity, movement bias, and metapopulation extinction risk in dendritic ecological networks. Journal of the North American Benthological Society, 30, 252–258.Google Scholar
Grant, E. H. C., Lowe, W. H. & Fagan, W. F. (2007). Living in the branches: population dynamics and ecological processes in dendritic networks. Ecology Letters, 10, 165–175.Google Scholar
Gregory, S., Li, H. & Li, J. (2002). The conceptual basis for ecological responses to dam removal. BioScience, 52, 713–723.CrossRefGoogle Scholar
Grossman, G. D., Moyle, P. B. & Whitaker, J. O. (1982). Stochasticity in structural and functional characteristics of an Indiana stream fish assemblage – a test of community theory. American Naturalist, 120, 423–454.CrossRefGoogle Scholar
Haas, T. C., Blum, M. J. & Heins, D. C. (2010). Morphological responses of stream fish to water impoundment. Ecology Letters, 6, 803–806.Google Scholar
Hart, D. D., Johnson, T. E., Bushaw-Newton, K. L., et al. (2002). Dam removal: challenges and opportunities for ecological research and river restoration. BioScience, 52, 669–681.Google Scholar
Hershey, A. E., Gettel, G. M., McDonald, M. E., et al. (1999). A geomorphic-trophic model for landscape control of Arctic lake food webs. BioScience, 49, 887–897.CrossRefGoogle Scholar
Hitt, N. P. & Angermeier, P. L. (2008). Evidence for fish dispersal from spatial analysis of stream network topology. Journal of the North American Benthological Society, 27, 304–320.CrossRefGoogle Scholar
Hitt, N. P., Eyler, S. & Wofford, J. E. B. (2012). Dam removal increases American eel abundance in distant headwater streams. Transactions of the American Fisheries Society, 141, 1171–1179.CrossRefGoogle Scholar
Hoagstrom, C. W., Brooks, J. E. & Davenport, S. R. (2011). A large-scale conservation perspective considering endemic fishes of the North American plains. Biological Conservation, 144, 21–34.CrossRefGoogle Scholar
Horwitz, R. J. (1978). Temporal variability patterns and the distributional patterns of stream fishes. Ecological Monographs, 48, 307–321.CrossRefGoogle Scholar
Hudman, S. P. & Gido, K. B. (2013). Multi-scale effects of impoundments on genetic structure of creek chub (Semotilus atromaculatus) in the Kansas River basin. Freshwater Biology, 58, 441–453.CrossRefGoogle Scholar
Hugueny, B., Movellan, A. & Belliard, J. (2011). Habitat fragmentation and extinction rates within freshwater fish communities: a faunal relaxation approach. Global Ecology and Biogeography, 20, 449–463.CrossRefGoogle Scholar
Humphries, P., King, A. J. & Koehn, J. D. (1999). Fish, flows and flood plains: links between freshwater fishes and their environment in the Murray–Darling River system, Australia. Environmental Biology of Fishes, 56, 129–151.CrossRefGoogle Scholar
Jackson, C. R. & Pringle, C. M. (2010). Ecological benefits of reduced hydrologic connectivity in intensively developed landscapes. BioScience, 60, 37–46.CrossRefGoogle Scholar
Jackson, D. A., Peres-Neto, P. R. & Olden, J. D. (2001). What controls who is where in freshwater fish communities – the roles of biotic, abiotic, and spatial factors. Canadian Journal of Fisheries and Aquatic Sciences, 58, 157–170.Google Scholar
Jaeger, K. L. & Olden, J. D. (2012). Electrical resistance sensor arrays as a means to quantify longitudinal connectivity of rivers. River Research and Applications, 28, 1843–1852.CrossRefGoogle Scholar
Jager, H. I. (2006a). Chutes and ladders and other games we play with rivers. I. Simulated effects of upstream passage on white sturgeon. Canadian Journal of Fisheries and Aquatic Sciences, 63, 165–175.Google Scholar
Jager, H. I. (2006b). Chutes and ladders and other games we play with rivers. II. Simulated effects of translocation on sturgeon. Canadian Journal of Fisheries and Aquatic Sciences, 63, 176–185.Google Scholar
Jager, H. I., Chandler, J. A., Lepla, K. B. & Winkle, W. V. (2001). A theoretical study of river fragmentation by dams and its effect on white sturgeon populations. Environmental Biology of Fishes, 60, 347–361.CrossRefGoogle Scholar
Kanno, Y., Letcher, B. H., Coombs, J. A., Nislow, K. H. & Whiteley, A. R. (2014). Linking movement and reproductive history of brook trout to assess habitat connectivity in a heterogeneous stream network. Freshwater Biology, 59, 142–154.CrossRefGoogle Scholar
Keefer, M. L., Stansell, R. J., Tackley, S. C., et al. (2012). Use of radiotelemetry and direct observations to evaluate sea lion predation on adult pacific salmonids at Bonneville Dam. Transactions of the American Fisheries Society, 141, 1236–1251.CrossRefGoogle Scholar
Kemp, P. S. & O'Hanley, J. R. (2010). Procedures for evaluating and prioritizing the removal of fish passage barriers: a synthesis. Fisheries Management and Ecology, 17, 297–322.Google Scholar
Kingsford, R. T. (2000). Ecological impacts of dams, water diversions and river management on floodplain wetlands in Australia. Austral Ecology, 25, 109–127.CrossRefGoogle Scholar
Lamphere, B. A. & Blum, M. J. (2012). Genetic estimates of population structure and dispersal in a benthic stream fish. Ecology of Freshwater Fish, 21, 75–86.CrossRefGoogle Scholar
Lande, R. (1993). Risk of population extinction from demographic and environmental stochasticity and random catastrophes. The American Naturalist, 142, 911–927.CrossRefGoogle ScholarPubMed
Letcher, B. H., Nislow, K. H., Coombs, J. A., O'Donnell, M. J. & Dubreuil, T. L. (2007). Population response to habitat fragmentation in a stream-dwelling brook trout population. PLoS ONE, 2, e1139.CrossRefGoogle Scholar
Leslie, A. J. Jr, Van Dyke, J. M., Nall, L. E. & Miley, W. W. II. (1982). Current velocity for transport of grass carp eggs. Transactions of the American Fisheries Society, 111, 99–101.2.0.CO;2>CrossRefGoogle Scholar
Levins, R. (1969). Some demographic and genetic consequences of environmental heterogeneity for biological control. Bulletin of the Entomological Society of America, 15, 237–240.CrossRefGoogle Scholar
Liermann, C. R., Nilsson, C., Robertson, J. & Ng, Y. (2012). Implications of dam obstruction for global freshwater fish diversity. BioScience, 62, 539–548.CrossRefGoogle Scholar
Lowe, W. H. & Allendorf, F. W. (2010). What can genetics tell us about population connectivity?Molecular Ecology, 19, 3038–3051.CrossRefGoogle ScholarPubMed
Lowe-McConnell, R. H. (1987). Ecological Studies in Tropical Fish Communities. New York, NY:Cambridge University Press.CrossRefGoogle Scholar
Luttrell, G. R., Echelle, A. A., Fisher, W. L. & Eisenhour, D. J. (1999). Declining status of two species of the Macrhybopsis aestivalis complex (Teleostei: Cyprinidae) in the Arkansas River Basin and related effects of reservoirs and barriers to dispersal. Copeia, 1999, 981–989.CrossRefGoogle Scholar
MacArthur, R. H. & Wilson, E. O. (1967). The Theory of Island Biogeography. Princeton, NJ:Princeton University Press.Google Scholar
Magoulick, D. D. & Kobza, R. M. (2003). The role of refugia for fishes during drought: a review and synthesis. Freshwater Biology, 48, 1186–1198.CrossRefGoogle Scholar
Mahlum, S., Cote, D., Wiersma, Y. F., Kehler, D. & Clarke, K. D. (2014). Evaluating the barrier assessment technique derived from FishXing software and the upstream movement of brook trout through road culverts. Transactions of the American Fisheries Society, 143, 39–48.CrossRefGoogle Scholar
Manel, S., Schwartz, M. K., Luikart, G. & Taberlet, P. (2003). Landscape genetics: combining landscape ecology and population genetics. Trends in Ecology and Evolution, 18, 189–197.CrossRefGoogle Scholar
Manier, M. K. & Arnold, S. J. (2006). Ecological correlates of population genetic structure: a comparative approach using a vertebrate metacommunity. Proceedings of the Royal Society – Biological Sciences, 273, 3001–3009.CrossRefGoogle ScholarPubMed
Matthews, W. J. & Marsh-Matthews, E. (2007). Extirpation of red shiner in direct tributaries of Lake Texhoma (Oklahoma–Texas): a cautionary case history from a fragmented river–reservoir system. Transactions of the American Fisheries Society, 136, 1041–1062.CrossRefGoogle Scholar
McRae, B. H., Dickson, B. G., Keitt, T. H. & Shah, V. B. (2008). Using circuit theory to model connectivity in ecology, evolution, and conservation. Ecology, 89, 2712–2724.CrossRefGoogle ScholarPubMed
Morita, K. S. & Yokota, A. (2002). Population viability of stream-resident salmonids after habitat fragmentation: a case study with white-spotted charr (Salvelinus leucomaenis) by an individual based model. Ecological Modelling, 155, 85–94.CrossRefGoogle Scholar
Morita, K., Yamamoto, S. & Hoshino, N. (2000). Extreme life-history change of white-spotted charr (Salvelinus leucomaenis) after damming. Canadian Journal of Fisheries and Aquatic Sciences, 57, 1300–1306.CrossRefGoogle Scholar
Morrissey, M. B. & de Kerckhove, D. T. (2009). The maintenance of genetic variation due to asymmetric gene flow in dendritic metapopulations. American Naturalist, 174, 875–889.CrossRefGoogle ScholarPubMed
Moyle, P. B., Li, H. W. & Barton, B. A. (1986). The Frankenstein effect: impact of introduced fishes on native fishes in North America. In Fish Culture in Fisheries Management. Stroud, R. H. (Ed.). Bethesda, MD:American Fisheries Society, pp. 415–426.Google Scholar
Mullen, L. B., Woods, H. A., Schwartz, M. K., Sepulveda, A. J. & Lowe, W. H. (2010). Scale-dependent genetic structure of the Idaho giant salamander (Dicamptodon aterrimus) in stream networks. Molecular Ecology, 19, 898–909.CrossRefGoogle Scholar
Musil, J., Horky, P., Slavik, O., Zboril, A. & Horka, P. (2012). The response of the young of the year fish to river obstacles: functional and numerical linkages between dams, weirs, fish habitat guilds and biotic integrity across large spatial scale. Ecological Indicators, 23, 634–640.CrossRefGoogle Scholar
Neary, V. S. (2012). Binary fish passage models for uniform and nonuniform flows. River Research and Applications, 28, 418–428.CrossRefGoogle Scholar
Neeson, T. M., Wiley, M. J., Adlerstein, S. A. & Riolo, R. L. (2011). River network structure shapes interannual feedbacks between adult sea lamprey migration and larval habitation. Ecological Modelling, 222, 3181–3192.CrossRefGoogle Scholar
Neville, H. M., Dunham, J. B. & Peacock, M. M. (2006). Landscape attributes and life history variability shape genetic structure of trout populations in a stream network. Landscape Ecology, 21, 901–916.CrossRefGoogle Scholar
Nilsson, C., Reidy, C. A., Dynesius, M. & Revenga, C. (2005). Fragmentation and flow regulation of the world's large river systems. Science, 308, 405–408.CrossRefGoogle ScholarPubMed
Nislow, K. H., Hudy, M., Letcher, B. H. & Smith, E. P. (2011). Variation in local abundance and species richness of stream fishes in relation to dispersal barriers: implications for management and conservation. Freshwater Biology, 56, 2135–2144.CrossRefGoogle Scholar
Norman, J. R., Hagler, M. H., Freeman, M. C. & Freeman, B. J. (2009). Application of a multistate model to estimate culvert effects on movement of small fishes. Transactions of the American Fisheries Society, 138, 826–838.CrossRefGoogle Scholar
Novinger, D. C. & Rahel, F. J. (2003). Isolation management with artificial barriers as a conservation strategy for cutthroat trout in headwater streams. Conservation Biology, 17, 772–781.CrossRefGoogle Scholar
O'Hanley, J. R. (2011). Open rivers: barrier removal planning and the restoration of free-flowing rivers. Journal of Environmental Management, 92, 3112–3120.Google ScholarPubMed
O'Hanley, J. R. & Tomberlin, C. (2005). Optimizing the removal of small fish passage barriers. Environmental Modelling and Assessment, 10, 85–98.Google Scholar
O'Hanley, J. R., Wright, J., Deibel, M., Fedora, M. A. & Soucy, C. L. (2013). Restoring stream habitat connectivity: a proposed method for prioritizing the removal of resident fish passage barriers. Journal of Environmental Management, 125, 19–27.CrossRefGoogle ScholarPubMed
Olden, J. D., Jackson, D. A. & Peres-Neto, P. R. (2001). Spatial isolation and fish communities in drainage lakes. Oecologia, 127, 572–585.CrossRefGoogle ScholarPubMed
Padgham, M. & Webb, J. A. (2010). Multiple structural modifications to dendritic ecological networks produce simple responses. Ecological Modelling, 221, 2537–2545.CrossRefGoogle Scholar
Park, D., Sullivan, M., Bayne, E. & Scrimgeour, G. (2008). Landscape-level stream fragmentation caused by hanging culverts along roads in Alberta's boreal forest. Canadian Journal of Forest Research, 38, 566–575.CrossRefGoogle Scholar
Pelicice, F. M. & Agostinho, A. A. (2008). Fish-passage facilities as ecological traps in large neotropical rivers. Conservation Biology, 22, 180–188.CrossRefGoogle ScholarPubMed
Pepino, M., Rodriguez, M. A. & Magnan, P. (2012). Fish dispersal in fragmented landscapes: a modelling framework for quantifying the permeability of structural barriers. Ecological Applications, 22, 1435–1445.CrossRefGoogle Scholar
Perkin, J. S. & Gido, K. B. (2011). Stream fragmentation thresholds for a reproductive guild of Great Plains fishes. Fisheries, 36, 371–383.CrossRefGoogle Scholar
Perkin, J. S. & Gido, K. B. (2012). Fragmentation alters stream fish community structure in dendritic ecological networks. Ecological Applications, 22, 2176–2187.CrossRefGoogle ScholarPubMed
Perkin, J. S., Gido, K. B., Al-Ta'Ani, O. & Scoglio, C. (2013). Simulating fish dispersal in stream networks fragmented by multiple road crossings. Ecological Modelling, 257, 44–56.CrossRefGoogle Scholar
Piry, S., Alapetite, A., Cornuet, J. M., et al. (2004). GENECLASS 2: a software for genetic assignment and first-generation migrant detection. Journal of Heredity, 95, 536–539.CrossRefGoogle Scholar
Poissant, J., Knight, T. W. & Ferguson, M. M. (2005). Nonequilibrium conditions following landscape rearrangement: the relative contribution of past and current hydrological landscapes on the genetic structure of a stream-dwelling fish. Molecular Ecology, 14, 1321–1331.CrossRefGoogle Scholar
Poplar-Jeffers, I. O., Petty, J. T., Anderson, J. T., et al. (2009). Culvert replacement and stream habitat restoration: implications from brook trout management in an Application Watershed, U.S.A. Restoration Ecology, 17, 404–413.CrossRefGoogle Scholar
Pringle, C. M., Naiman, R. J., Bretschko, G., et al. (1988). Patch dynamics in lotic systems: the stream as a mosaic. Journal of the North American Benthological Society, 7, 503–524.CrossRefGoogle Scholar
Pringle, J. M., Blakeslee, A. M. H., Byers, J. E. & Roman, J. (2011). Asymmetric dispersal allows an upstream region to control population structure throughout a species’ range. Proceedings of the National Academy of Sciences USA, 108, 15288–15293.CrossRefGoogle ScholarPubMed
Quist, M. C. & Spiegel, J. R. (2012). Population demographics of catostomids in large river ecosystems: effects of discharge and temperature on recruitment dynamics and growth. River Research and Applications, 28, 1567–1586.CrossRefGoogle Scholar
Rahel, F. J. (2013). Intentional fragmentation as a management strategy in aquatic systems. BioScience, 63, 362–372.CrossRefGoogle Scholar
Rahel, F. J., Keleher, C. J. & Anderson, J. L. (1996). Potential habitat loss and population fragmentation for cold water fish in the North Platte River drainage of the Rocky Mountains: response to climate warming. Limnology and Oceanography, 41, 1116–1123.CrossRefGoogle Scholar
Reid, S. M., Wilson, C. C., Mandrak, N. E. & Carl, L. M. (2008). Population structure and genetic diversity of black redhorse (Moxostoma duquesnei) in a highly fragmented watershed. Conservation Genetics, 9, 531–546.CrossRefGoogle Scholar
Rieman, B. E. & Dunham, J. B. (2000). Metapopulations and salmonids: a synthesis of life history patterns and empirical observations. Ecology of Freshwater Fish, 9, 51–64.CrossRefGoogle Scholar
Roberts, J. H. & Angermeier, P. L. (2007). Movement responses of stream fishes to introduced corridors of complex cover. Transactions of the American Fisheries Society, 136, 971–978.CrossRefGoogle Scholar
Roberts, J. J., Fausch, K. D., Peterson, D. P. & Hooten, M. B. (2013). Fragmentation and thermal risks from climate change interact to affect persistence of native trout in the Colorado River basin. Global Change Biology, 19, 1383–1398.CrossRefGoogle ScholarPubMed
Rodriguez, M. A. (2002). Restricted movement in stream fish: the paradigm is incomplete, not lost. Ecology, 83, 1–13.CrossRefGoogle Scholar
Rolls, R. J., Leigh, C. & Sheldon, F. (2012). Mechanistic effects of low-flow hydrology on riverine ecosystems: ecological principles and consequences of alteration. Freshwater Science, 31, 1163–1186.CrossRefGoogle Scholar
Roni, P., Beechie, T., Schmutz, S. & Muhar, S. (2012). Prioritization of watersheds and restoration projects. In Stream and Watershed Restoration: A Guide to Restoring Riverine Processes and Habitats. Roni, P. and Beechie, T. (Eds). Chichester:John Wiley and Sons, pp. 189–214.CrossRefGoogle Scholar
Scheffer, M., Van Geest, G. J., Zimmer, K., et al. (2006). Small habitat size and isolation can promote species richness: second-order effects on biodiversity in shallow lakes and ponds. Oikos, 112, 227–231.CrossRefGoogle Scholar
Schlosser, I. J. (1982). Fish community structure and function along two habitat gradients in a headwater stream. Ecological Monographs, 52, 395–414.CrossRefGoogle Scholar
Schlosser, I. J. & Angermeier, P. L. (1995). Spatial variation in demographic processes of lotic fishes: conceptual models, empirical evidence, and implications for conservation. American Fisheries Society Symposium, 17, 392–401.Google Scholar
Sethi, S. A., Selle, A. R., Doyle, M. W., Stanley, E. H. & Kitchel, H. E. (2004). Response of unionid mussels to dam removal in Koshkonong Creek, Wisconsin (USA). Hydrobiologia, 525, 1–3.CrossRefGoogle Scholar
Shurin, J. B., Cottenie, K. & Hillebrand, H. (2009). Spatial autocorrelation and dispersal limitation in freshwater organisms. Oecologia, 159, 151–159.CrossRefGoogle ScholarPubMed
Skalski, G. T. & Gilliam, J. F. (2000). Modeling diffusive spread in a heterogeneous population: a movement study with stream fish. Ecology, 81, 1685–1700.CrossRefGoogle Scholar
Slatkin, M. (1985). Gene flow in natural populations. Annual Review of Ecology and Systematics, 16, 393–430.CrossRefGoogle Scholar
Smith, J. M. (1981). Macroevolution. Nature, 289, 13–14.CrossRefGoogle ScholarPubMed
Stanley, E. H. & Doyle, M. W. (2003). Trading off: the ecological effects of dam removal. Frontiers in Ecology and the Environment, 1, 15–22.CrossRefGoogle Scholar
Sterling, K. A., Reed, D. H., Noonan, B. P. & Warren, M. L. (2012). Genetic effects of habitat fragmentation and population isolation on Etheostoma raneyi (Percidae). Conservation Genetics, 13, 859–872.CrossRefGoogle Scholar
Storfer, A., Murphy, M. A., Spear, S. F., Holderegger, R. & Waits, L. P. (2010). Landscape genetics: where are we now?Molecular Ecology, 19, 3496–3514.CrossRefGoogle ScholarPubMed
Stuart, I. G. & Mallen-Cooper, M. (1999). An assessment of the effectiveness of a vertical-slot fishway for non-salmonid fish at a tidal barrier on a large tropical/subtropical river. Regulated Rivers: Research and Management, 15, 575–590.3.0.CO;2-Q>CrossRefGoogle Scholar
Taylor, P. D., Fahrig, L. & Merriam, G. (1993). Connectivity is a vital element of landscape structure. Oikos, 68, 571–573.CrossRefGoogle Scholar
Tibbets, C. A. & Dowling, T. E. (1996). Effects of intrinsic and extrinsic factors on population fragmentation in three species of North American minnows (Teleostei: Cyprinidae). Evolution, 50, 1280–1292.CrossRefGoogle ScholarPubMed
Tonn, W. M. & Magnuson, J. J. (1982). Patterns in the species composition and richness of fish assemblages in northern Wisconsin lakes. Ecology, 63, 1149–1166.CrossRefGoogle Scholar
Tonn, W. M., Magnuson, J. J., Rask, M. & Toivonen, J. (1990). Intercontinental comparison of small-lake fish assemblages – the balance between local and regional processes. American Naturalist, 136, 345–375.CrossRefGoogle Scholar
Turner, T. F., Osborne, M. J., Moyer, G. R., Benavides, M. A. & Alo, D. (2006). Life history and environmental variation interact to determine effective population to census size ratio. Proceedings of the Royal Society – Biological Sciences, 273, 3065–3073.CrossRefGoogle ScholarPubMed
Turner, T. F. & Robison, H. W. (2006). Genetic diversity of the Caddo Madtom, Noturus taylori, with comments on factors that promote genetic divergence in fishes endemic to the Ouachita highlands. Southwestern Naturalist, 51, 338–345.CrossRefGoogle Scholar
Turner, T. F. & Trexler, J. C. (1998). Ecological and historical associations of gene flow in darters (Teleostei: Percidae). Evolution, 52, 1781–1801.CrossRefGoogle ScholarPubMed
Urban, M. C. & Skelly, D. K. (2006). Evolving metacommunities: toward and evolutionary perspective on metacommunities. Ecology, 87, 1616–1626.CrossRefGoogle ScholarPubMed
Vannote, R. L., Minshall, G. W., Cummins, K. W., Sedell, J. R. & Cushing, C. E. (1980). The river continuum concept. Canadian Journal of Fisheries and Aquatic Sciences, 37, 130–137.CrossRefGoogle Scholar
Waits, E. R., Bagley, M. J., Blum, M. J., McCormick, F. H. & Lazorchak, J. M. (2008). Source–sink dynamics sustain central stonerollers (Campostoma anomalum) in a heavily urbanized catchment. Freshwater Biology, 53, 2061–2075.CrossRefGoogle Scholar
Walters, D. M., Zuellig, R. E., Crockett, H. J., et al. (2014). Barriers impeded upstream spawning migration of flathead chub. Transactions of the American Fisheries Society, 143, 17–25.CrossRefGoogle Scholar
Wang, J. L., & Whitlock, M. C. (2003). Estimating effective population size and migration rates from genetic samples over space and time. Genetics, 163, 429–446.Google ScholarPubMed
Waples, R. S. (1987). A multispecies approach to the analysis of gene flow in marine shore fishes. Evolution, 41, 385–400.CrossRefGoogle ScholarPubMed
Waples, R. S. (1989). Temporal variation in allele frequencies – testing the right hypothesis. Evolution, 43, 1236–1251.CrossRefGoogle ScholarPubMed
Ward, J. V., Tockner, K. & Schiemer, F. (1999). Biodiversity of floodplain river ecosystems: ecotones and connectivity. Regulated Rivers: Research and Management, 15, 125–139.3.0.CO;2-E>CrossRefGoogle Scholar
Wares, J. P. (2002). Community genetics in the Northwestern Atlantic intertidal. Molecular Ecology, 11, 1131–1144.CrossRefGoogle ScholarPubMed
Wares, J. P. & Pringle, J. M. (2008). Drift by drift: effective population size is limited by advection. BMC Evolutionary Biology, 8, 235.CrossRefGoogle ScholarPubMed
Warren, M. J. Jr & Pardew, M. G. (1998). Road crossings as barriers to small-stream fish movement. Transactions of the American Fisheries Society, 127, 637–644.2.0.CO;2>CrossRefGoogle Scholar
Welcomme, R. L. (1979). The fisheries Ecology of floodplain Rivers. London:Longman.Google Scholar
Whiteley, A. R., Spruell, P. & Allendorf, F. W. (2004). Ecological and life history characteristics predict population genetic divergence of two salmonids in the same landscape. Molecular Ecology, 13, 3675–3688.CrossRefGoogle ScholarPubMed
Whitlock, M. C. & McCauley, D. E. (1990). Some population genetic consequences of colony formation and extinction – genetic correlations within founding groups. Evolution, 44, 1717–1724.CrossRefGoogle ScholarPubMed
Wiens, J. A. (2002). Riverine landscapes: taking landscape ecology into the water. Freshwater Biology, 47, 501–515.CrossRefGoogle Scholar
Wilson, G. A. & Rannala, B. (2003). Bayesian inference of recent migration rates using multilocus genotypes. Genetics 163, 1177–1191.Google ScholarPubMed
Winemiller, K. O., Flecker, A. S. & Hoeinghaus, D. J. (2010). Patch dynamics and environmental heterogeneity in lotic ecosystems. Journal of the North American Benthological Society, 29, 84–99.CrossRefGoogle Scholar
Winston, M. R., Taylor, C. M. & Pigg, J. (1991). Upstream extirpation of four minnow species due to damming of a prairie stream. Transactions of the American Fisheries Society, 120, 98–105.2.3.CO;2>CrossRefGoogle Scholar
Wofford, J. E. B., Gresswell, R. E. & Banks, M. A. (2005). Influence of barriers to movement on within-watershed genetic variation of coastal cutthroat trout. Ecological Applications, 15, 628–637.CrossRefGoogle Scholar
Woodford, D. J. & McIntosh, A. R. (2010). Evidence of source-sink metapopulations in a vulnerable native galaxiid fish driven by introduced trout. Ecological Applications, 20, 967–977.CrossRefGoogle Scholar
World Commission on Dams. (2000). Dams and Development: A New Framework for Decision-Making. London: EarthScan Publications.
Wright, S. (1939). The distribution of self-sterility alleles in populations. Genetics, 24, 538–552.Google ScholarPubMed
Wright, S. (1978). Evolution and the Genetics of Populations, Volume 4: Variability Within and Among Natural Populations (Evolution and the Genetics of Populations). Chicago, IL: University of Chicago Press.Google Scholar
Wunderlich, R. C., Winter, B. D. & Meyer, J. H. (1994). Restoration of the Elwah River ecosystem. Fisheries, 19, 11–19.2.0.CO;2>CrossRefGoogle Scholar

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