LCMS/MS-based mining of the peptaibiome: A discovery of new peptaibols

01 September 2025, Version 2
This content is an early or alternative research output and has not been peer-reviewed by Cambridge University Press at the time of posting.

Abstract

In this study, we employed liquid chromatography–tandem mass spectrometry (LC–MS/MS) to perform chemo-profiling on four fungal species: three Trichoderma species—two strains of Trichoderma asperellum (S3-3 and S3-1) and one Trichoderma longibrachiatum (FS-46)—and one species from the Tolypocladium genus, Tolypocladium inflatum (MTCC-3538). Our analysis identified 78 peptaibols featuring α-aminoisobutyric acid (Aib). Among these, we discovered both cyclic and linear Peptaibols and lipopeptaibols with Aib, ranging in putative molecular weights from 1033.4 to 1953.6 g/mol, corresponding to peptide lengths of 10-20 amino acids. In total, 78 peptaibols, including lipopeptaibols, were identified through LC-MS/MS. Of these, 43 were recognized as new peptaibols based on mass fragmentation patterns and sequence data from the MS/MS analysis. Our findings suggest that LC-MS/MS-based large-scale studies of the peptaibiome will facilitate the discovery of novel peptaibols and provide a valuable reference for understanding the fragmentation patterns of peptaibols, cyclic peptaibols, and lipopeptaibols.

Keywords

Trichoderma
Tolypocladium
Liquid Chromatography
Mass Spectrometry
LCMS/MS
Peptaibols
Lipopeptaibols

Supplementary materials

Title
Description
Actions
Title
Supporting information for LCMS/MS-based mining of the peptaibiome: A discovery of new peptaibols
Description
The supporting information includes a PDF file containing TIC/EIC chromatograms, MS/MS fragmentation patterns of the identified peptaibols, their sequence information, and the assigned mass-to-charge (m/z) ratios. Additionally, an Excel sheet is provided, which summarizes all identified peptaibols in tabular format, including their sequences, ion forms, molecular formulas, observed and calculated m/z values, mass errors, retention times, and classification status (new or previously reported).
Actions
Title
Supporting information for LCMS/MS-based mining of the peptaibiome: A discovery of new peptaibols
Description
Additionally, an Excel sheet is provided, which summarizes all identified peptaibols in tabular format, including their sequences, ion forms, molecular formulas, observed and calculated m/z values, mass errors, retention times, SMILES string and classification status (new or previously reported).
Actions

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