Many Roads to the Seam: How Conformational Flexibility Drives Nonadiabatic Relaxation in a Prototypical Tetrapyrrolic Chromophore

26 November 2025, Version 1
This content is an early or alternative research output and has not been peer-reviewed by Cambridge University Press at the time of posting.

Abstract

Large and structurally flexible chromophores pose challenges for in silico modelling of photodeactivation due to the many vibrational modes that can funnel the system toward energy degeneracy. In this work, we examine how the multiple degrees of freedom in biliverdin, a prototypical tetrapyrrolic chromophore, cooperate to drive access to the S1/S0 intersection seam in vacuo. We begin by mapping the ground-state potential energy surface to identify representative biliverdin conformers relevant to photoexcitation. We then use a CASSCF-based framework to map the excited-state landscape and characterize the intersection seam, identifying distinct conical-intersection types. Finally, we employ ab initio multiple spawning to resolve the dynamical pathways by which the system accesses these regions. DFT potential-energy and free-energy mappings indicate that, although several conformers are relevant, the “locked-helix” ZsZsZs conformer predominates on the ground state. The intersection seam comprises numerous geometrically distinct regions characterized by varying degrees and combinations of dihedral torsion, pyramidalization, and bond-length alternation. Yet only select regions lie within energetic reach, and moderate barriers separate them from the S1 minimum. Nonadiabatic dynamics combined with multivariate analyses show that, despite extensive mode coupling during deactivation that guides the system toward multiple regions of the seam, a single dihedral torsion together with bond-length alternation predominantly drive energy degeneracy. This work offers new insight into biliverdin’s intrinsic photochemical response and underscores a general feature of flexible chromophores: many modes may participate during photorelaxation, but only a limited subset ultimately dictates seam accessibility.

Keywords

photochemistry
nonadiabatic dynamics
conical intersection
intersection seam
biliverdin
bilin

Supplementary materials

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Title
Supporting information for: Many Roads to the Seam: How Conformational Flexibility Drives Nonadiabatic Relaxation in a Prototypical Tetrapyrrolic Chromophore
Description
The Supporting Information contains: • Umbrella sampling convergence data. • Electronic structure method assessment and benchmarking data. • Structural and energetic information on the ground state conformers identified, and minimum energy paths between them. • Energetic information for all the identified MECIs.
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