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567 Multigenerational impacts on DNA methylation signatures in autism spectrum disorder

Published online by Cambridge University Press:  03 April 2024

George Eusebio Kuodza
Affiliation:
UNIVERSITY OF CALIFORNIA, DAVIS
Ray Kawai
Affiliation:
UNIVERSITY OF CALIFORNIA, DAVIS
Yunin J.L. Rodriguez
Affiliation:
UNIVERSITY OF CALIFORNIA, DAVIS
Julia S. Mouat
Affiliation:
UNIVERSITY OF CALIFORNIA, DAVIS
Sophia M. Hakam
Affiliation:
UC Berkeley
Timothy N. Sullivan
Affiliation:
UNIVERSITY OF CALIFORNIA, DAVIS
Cole R. Torvick
Affiliation:
UNIVERSITY OF CALIFORNIA, DAVIS
Deborah Bennett
Affiliation:
UNIVERSITY OF CALIFORNIA, DAVIS
Irva Hertz-Picciotto
Affiliation:
UNIVERSITY OF CALIFORNIA, DAVIS
Janine M. LaSalle
Affiliation:
UNIVERSITY OF CALIFORNIA, DAVIS
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Abstract

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OBJECTIVES/GOALS: to investigate the potential impact of grandparental factors and multigenerational epigenetic inheritance on the development of ASD METHODS/STUDY POPULATION: Our study recruited participants from the CHARGE (Child Autism Risks from Genetics and the Environment) study, including grandparents, parents, and children. A questionnaire was used to gather information about the participants’ exposure to environmental factors. Saliva samples werecollected from 349 participants. Newborn dried blood spotsfrom probands and parents are still being collected from the California New born Registry. DNA was extracted from 349 saliva samples from 85 families and subjected to whole genome bisulfite sequencing (WGBS) to analyze DNA methylation. Sequence alignments and bioinformatic analyses will be performed using R packages called DMRichR and Comethyl. RESULTS/ANTICIPATED RESULTS: Sequence alignments and bioinformatic analyses are ongoing, utilizing DMRichR to identify individual genomic loci associated with ASD in each of the three generations and Comethyl to compare correlation patterns between methylation marks and selected variables, including grand parental exposures. New born blood spot collections of parents and probands are ongoing and will be used to identify potential ASD epigenomic signatures that are tissue and life-stage independent. DISCUSSION/SIGNIFICANCE: This research will provide new insights into the increased prevalence and underlying etiology of ASD that should pave the way for future research in the field. DNA Methylation signatures can help create molecular biomarkers which can be used together with behavioral clinical tests for diagnosis of ASD.

Type
Team Science
Creative Commons
Creative Common License - CCCreative Common License - BYCreative Common License - NCCreative Common License - ND
This is an Open Access article, distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives licence (https://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is unaltered and is properly cited. The written permission of Cambridge University Press must be obtained for commercial re-use or in order to create a derivative work.
Copyright
© The Author(s), 2024. The Association for Clinical and Translational Science