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Summary

The 7 and 13-valent pneumococcal conjugate vaccines (PCVs) have reduced the incidence of invasive pneumococcal disease (IPD) in children in many countries. The objective of this work was to assess the impact of PCVs and potential herd-protection in older adults in Ireland. IPD notification and typing data from adults ⩾65 years of age from July 2007 to June 2016 was assessed using national surveillance data. There was a 94% reduction in PCV7 serotypes from 2007–2008 to 2015–2016, incidence rate ratio (IRR 0·05, P < 0·0001). However, there was no decline in the additional PCV13 (PCV13-7) serotypes over the same period (IRR 0·90) nor in comparison with the pre-PCV13 period 2009–2010 (IRR 0·92). The incidence of serotypes in the 23-valent pneumococcal polysaccharide vaccine only (PPV23-PCV13) and non-vaccine types (NVTs) increased significantly (IRR 2·17, P = 0·0002 and IRR 3·43, P = 0·0001 respectively). Consequently, the overall IPD incidence rate in adults has remained relatively unchanged (from 28·66/100 000 to 28·88/100 000, IRR 1·01, P = 0·9477). Serotype 19A and NVTs were mainly responsible for penicillin resistance in recent years. The decline of PCV7 serotypes indicate that the introduction of PCV7 resulted in herd-protection for adults. However, increases in PPV23-PCV13 and NVTs suggest that changes in vaccination strategy amongst older adults are needed to build on the success of PCVs in children.

INTRODUCTION

Streptococcus pneumoniae is a gram-positive bacterial organism that readily colonises the nasopharynx asymptomatically. The organism can cause non-invasive and invasive pneumococcal disease (IPD) such as bloodstream infection/septicaemia, meningitis and invasive pneumonia. IPD remains a considerable cause of morbidity and mortality in both resource-rich and resource-poor countries with the highest disease risk associated with young children and older adults [1].

The 7-valent pneumococcal conjugate vaccine (PCV) was developed to provide protection against predominant serotypes associated with paediatric invasive disease at the time of vaccine development [2]. Subsequently, 10-valent and 13-valent vaccines (PCV10/PCV13) were introduced to provide protection against additional serotypes and to address serotype replacement [35]. In many countries, the introduction of PCVs has resulted in a significant reduction of IPD in children and also contributed to herd-protection for unvaccinated adults [3, 612].

However, vaccination schedules vary according to regions and countries [1315]. IPD incidence rates and the predominant serotypes may also vary due to patient demographics and vaccination uptake [3, 1618]. As a result, it is important that countries monitor the serotype distribution and incidence rates in order to detect and report regional differences and monitor the effect of vaccination.

PCV7 was introduced to the Irish childhood immunisation schedule for children aged 2, 6 and 12 months of age (2 + 1 campaign) in September 2008, with a catch-up campaign for children <2 years of age. The PCV13 replaced PCV7 in December 2010 with the vaccine offered to children aged 2, 6 and 12–13 months of age, without the catch up campaign. Uptake of three doses of PCV by 24 months of age has ranged between 90 and 92% since 2011 [19]. The latest figures indicate that the number of PCV7 and PCV13-7 cases have fallen by 100 and 45%, respectively, in patients <5 years of age [20] and is similar to what is reported elsewhere with a 2+1 schedule [68, 10, 21].

In Ireland adults ⩾65 years of age are recommended to receive the 23-valent pneumococcal polysaccharide vaccine. As of August 2015, PCV13 is recommended for high-risk adults such as those with immunosuppressive conditions or other risk-associated co-morbidities [22]. However, the uptake of PPV23 remains low among the adult population in Ireland [23]. The most recent figures indicate that between 27 and 36% of adults ⩾65 years of age received PPV23 between 2005 and 2013 [23] in comparison with other countries such as Germany (51%)[24], the USA (60%) [15] and the UK (70%) [25]. However, despite successful PPV23 vaccination campaigns in countries such as the UK, there has been no clear evidence of a reduction of PPV23-PCV13 serotypes among adults. Whereas the addition of PCV13 to the childhood immunisation schedule has reduced the incidence of PCV13 serotypes and the overall incidence of IPD in the adult population [6, 26].

The large scale CAPiTA trial conducted in The Netherlands provided PCV13 to over 40 000 participant ⩾65 years of age [27]. The results indicated that the number of invasive infections caused by PCV13 serotypes was lower after vaccination, with efficacy rates of 76 and 49% for PCV13 and all serotypes, respectively [27]. Further studies have reported no evidence of waning immunity with PCV13 after 5 years [28] unlike with PPV23 [29, 30]. Recent studies in the USA have indicated that the provision of PCV13 followed by a subsequent dose of PPV23 to patients ⩾70 years of age elicits a higher antibody response to PCV13 serotypes than PPV23 alone [31]. Following this, the USA has introduced one dose of PCV13 and then subsequently immunised with PPV23 to further reduce the burden of IPD in adults [32].

Given the complexity of the evolving predominant serotypes and differences in disease incidence rates, national surveillance of IPD is vital to assess changes that may affect future vaccination policies for different age groups, including the elderly. Here we evaluate the indirect effects of PCVs on adults ⩾65 years of age in Ireland and discuss the implications.

MATERIALS AND METHODS

Data collection

For notification purposes, confirmed IPD cases includes isolation of S. pneumoniae by culture or the detection of S. pneumoniae nucleic acid or antigens from a normally sterile site [33]. Clinicians and laboratories are legally obliged to notify the Department of Public Health (DPH) of IPD infections in Ireland since 2004. Statutory notification data are collated using the Computerised Infectious Diseases Reporting (CIDR) system, a secure web-based system for collecting and collating data on notifiable infectious diseases in Ireland. Public and private clinical laboratories are requested to refer all culture positive IPD isolates to the Irish Pneumococcal Reference Laboratory (IPRL) for typing. Despite the introduction of molecular technology as an additional method for detection of pathogens, the use of the routine culture techniques remains the core method for detecting culture positive S. pneumoniae from sterile samples such as blood and CSF samples. The serotype results are linked with the individual notification events reported each quarter using the CIDR system. Missing or incomplete typing data are continually monitored in each region through the DPH and at a national level at the Health Protection Surveillance Centre, each quarter. Laboratories with missing or incomplete typing data are then invited to refer any available isolates to the IPRL for typing. The results of a recent retrospective audit of all national laboratories indicated that all laboratories who reported identifying S. pneumoniae from sterile sites were also reporting the findings to DPH, and based on the isolate records there was a high rate of completeness of typing during this period. This paper focuses on confirmed IPD notifications only from culture positive cases in adults ⩾65 years of age with available serotype data. IPD cases that were confirmed by PCR alone were not included.

Laboratory analysis

Serotyping was performed on all invasive pneumococcal isolates available by serological reactions using the serum samples from the Staten Serum Institute (DK-2300 Copenhagen S, Denmark) and a multiplex-PCR as previously described [34]. Antimicrobial susceptibility was assessed using the E-test method, and results interpreted using the Clinical Laboratory Standards Institute (CLSI) meningitis breakpoints [35]. Resistance to penicillin and cefotaxime are defined as a Minimum Inhibitory Concentration of ⩾0·12 mg/L and MIC ⩾2 mg/L.

Data analysis

Incidence rates (IR) were calculated based on the annual population estimates provided by the Central Statistics Office (http://www.cso.ie) and expressed as the number of serotyped isolates from cases per 100 000 population (/100 000). The population estimates for those ⩾65 years of age in Ireland has increased from 471 021 people to 606 011 people (29% increase) over the 9 year period. All changes in incidence rates are stratified to take this into account. The isolates were also categorised according to vaccine-associated serotypes: PCV7 serotypes (4, 6B, 9V, 14, 18C, 19F, 23F); the additional serotypes included in PCV13 but not in PCV7 i.e. PCV13-7 serotypes (1, 3, 5, 6A, 7F, 19A); the PPV23 serotypes not covered in the either of the PCV vaccines i.e. PPV23-PCV13 (2, 8, 9N, 10A, 11A, 12F, 15B, 17F, 20, 22F, 33F); NVT serotypes, non-vaccine associated serotypes and non-typable isolates. The distribution of typed IPD cases among older adults was categorised by age group. Age, vaccine and non-vaccine serotype specific IR were calculated and pre-PCV7 vaccine (2007–2008), pre-PCV-13 vaccine (2009–2010) and post-vaccine (2015–2016) epidemiological years (July–June) were compared. Data analysis was performed using IBM SPSS Statistics for Windows, Version 20·0 (Armonk, NY: IBM Corporation) and software for calculating incidence rate ratios (IRR) and 95% confidence intervals (CI) (https://www.medcalc.org). Two-tailed P value ⩽0·05 was considered statistically significant.

RESULTS

Over the 9 epidemiological years, 86% of all notified cases had typing data available (mean 86%, range 79–92%). The annual proportion of typed isolate was 84, 82, 79, 88, 92, 87, 83, 90 and 90% for each epidemiological year between 2007–2008 and 2015–2016. This consisted of a total of 1387 isolates serotyped by the reference laboratory from samples taken from adults ⩾65 years of age from July 2007 to June 2016. Ninety-nine per cent of the isolates were from blood cultures.

Older adults aged between 75 and 84 years of age and those aged ⩾85 years had a consistently much higher IR than those aged between 65 and 74 years of age (Fig. 1). Although there was no statistically significant change in IR from 2007–2008 to 2015–2016, there was also a notable decline in IR in adults ⩾85 years of age in 2008–2009 and 2010–2011, which coincided with the introduction of PCV7 (September 2008) and PCV13 (December 2010). Overall there was much greater variability in the annual IR within this age groups than those aged between 65 and 74 years or those aged between 75 and 84 years of age. However, there was no statistically significant change over the 9 years in the total IPD IR in any of the three age categories and no significant change in the overall IR of all adults ⩾65 years of age which went from 28·66/100 000 in 2007–2008 to 28·88/100 000 in 2015–2016 (IRR 1·01, 95% CI 0·80–1·27, P = 0·9477 – as indicated in Table 1).

Fig. 1. The IPD incidence rate (IR) per 100 000 population in Ireland by age group, from 2007–08 to 2015–16.

Table 1. Changes in the incidence of IPD in adults aged ⩾65 years of age, per age and vaccine-type

* % change denotes the percentage change in the number of isolates typed in 2007–2008 (pre-PCV7) and 2009–2010 (pre-PCV13) in comparison with the number of isolates typed in 2015–2016

PCV7 denotes the serotypes in the 7-valent conjugate vaccine.

PCV13-7 denotes the serotypes in the 13-valent conjugate vaccine not included in PCV7.

PPV23-PCV13 denotes the serotypes in the 23-valent polysaccharide vaccine not included in PCV13.

Non-vaccine types (NVT) denote all other serotypes not included in either the PCV7/13 or PPV23 vaccines and non-typable isolates.

IR denotes the incidence rate of typed isolates per 100 000 population per epidemiological year.

n, number of isolates typed per epidemiological year.

Incidence Rate Ratio (IRR) denotes the ratio between the incidence rate of typed isolates in the epidemiological year 2015–2016 in comparison with the pre-PCV7-vaccine epidemiological year 2007–2008 and pre-PCV13 vaccine year 2009–2010.

95% CI denotes the 95% confidence interval of the IRR.

P value of <0·05 denotes a significant difference between two incidence rates (highlighted in bold text).

Figure 2 displays the changes in vaccine-associated serotypes responsible for IPD from 2007–2008 to 2015–2016 from all adults ⩾65 years of age (annual IR and breakdown for each serotype are also listed in Supplementary Table 2). The incidence of PCV7 serotypes fell rapidly after the introduction of PCV and declined consistently each year, including after PCV7 was replaced with PCV13. However the incidence of PCV13-7 serotypes remained relatively unchanged, consistently staying >6/100 000 and peaking in 2011–2012 (IR 10·16), despite the introduction of the PCV13 vaccine in December 2010. Moreover, the incidence of PPV23-PCV13 and non-vaccine types (NVTs) continued to increase. As indicated in Table 1, the incidence of PCV7 serotypes fell significantly (IRR 0·05, 95% CI 0·01–0·13, P < 0·0001), however, there was no change in the incidence of PCV13-7 serotypes during this surveillance period (IRR 0·90, 95% CI 0·54–1·49, P = 0·6580) nor in comparison with the pre-PCV13 year 2009–2010 (IRR 0·92, 95% CI 0·56–1·53, P = 0·7380). However, there were significant increases in the incidence of PPV23-PCV13 (IRR 2·17, 95% CI 1·40–3·44, P = 0·0002) and NVTs (IRR 3·43, 95% CI 1·81–7·06, P < 0·0001), this trend was evident in all three age groups (as displayed in Table 1).

Fig. 2. The IPD incidence rate (IR) in adults aged ⩾65 years of age in Ireland, per serotype group based on epidemiological years (July 2007–June 2016). PCV7 denotes the serotypes in the 7-valent conjugate vaccine. PCV13-7 denotes the serotypes in the 13-valent conjugate vaccine not included in PCV7. PPV23-PCV13 denotes the serotypes in the 23-valent polysaccharide vaccine not included in PCV13. Non-vaccine types (NV1) denote all other serotypes not included in either the PCV7/13 or PPV23 vaccines and non-typable isolates. aPCV7 was introduced to the childhood immunisation schedule in September 2008. bPCV13 was introduced to the childhood immunisation schedule in December 2010.

The differences in serotypes associated IPD infections in 2007–2008 and 2015–2016 are listed in Supplementary Tables 1–3. The results indicate that serotypes 3 (IRR 1·76, 95% CI 0·68–5·11) and 19A (IRR 1·40, 95% CI 0·61–3·42) remain predominant and the number of cases has increased slightly in recent years in comparison with earlier years. However, it is also important to note that the incidence of PCV13-7 serotypes peaked in 2011–2012 (IR 10·16/100 000), this may be also due to selective pressure following the introduction of PCV7 in September 2008, which resulted in a steady increase in PCV13-7 serotypes. Most of the PCV13-7 serotypes have subsequently fallen, such as 6A and 7F, while others such as 19A and 3 have remained predominant serotypes associated with invasive infections. Other serotypes that have also increased in recent years include PPV23-PCV13 serotypes 8, 10A, 12F, 17F, 22F, 33F and the NVTs 15A and 35F (Supplementary Table 3).

As displayed in Table 2, a small subset of pneumococcal serotypes was associated with reduced susceptibility to penicillin (referred to as penicillin non-susceptible pneumococci, PNSP). A similar trend was observed for cefotaxime; an isolate non-susceptible to penicillin was also more likely to be cefotaxime non-susceptible pneumococci (CNSP). The percentage of isolates that were identified as PNSP has fallen from a peak of 24% in 2008–2009 to 13% in 2015–2016. This was mainly due to a decline in PCV7 serotypes such as 6B, 9V, 14 and 19F that were also frequently associated with non-susceptibility. However, the PCV13-7 serotype 19A has remained a predominant serotype associated with PNSP (53% of serotype 19A isolates were PNSP in 2015–2016). Moreover, other serotypes not covered in any of the vaccines have emerged in recent years including 15A, 35B and 35F, with PNSP rates of 48, 81 and 18% for the 9-year period.

Table 2. Serotypes associated with penicillin non-susceptible pneumococci (PNSP) from adults aged ⩾65 years of age in Ireland, from 2007–2008 to 2015–2016

PCV7 and PCV13-7 denotes the serotypes in each vaccine group that were also associated with reduced susceptibility to penicillin. Non-vaccine types (NVT) denote serotypes not included in the PCV or PPV associated serotypes. Isolates with a minimum inhibitory concentration of ⩾0·12 mg/L were considered resistant according to the CLSI meningitis breakpoints.

% denotes the percentage of isolates of a particular serotype that were resistant to penicillin (i.e. all serotype 9V isolates received and typed in 2007–2008 were resistant to penicillin = 100%).

DISCUSSION

Retrospective analysis of serotypes distribution in IPD cases plays an important role in informing future vaccination strategies. It cannot be assumed that a decline in IPD incidence rates observed in some countries will always be mirrored elsewhere over time. There are some notable differences in our data compared with those from other national and international surveillance systems that are of interest. First, we did not see a consistent decline in PCV13-7 serotypes in adults ⩾65 years of age following the introduction of PCV13 to routine childhood vaccination in 2010. It was expected that PCV13 might provide indirect herd-protection to adults, similar to the preceding PCV7 vaccine. This unanticipated finding was attributable to the persistence/increase in serotypes 3 and 19A, which remained predominant serotypes in this age-group in Ireland in over 5 years following PCV13 introduction. Waight et al. reported a significant decline in the PCV13-7 serotypes 4 years after PCV13 introduction, with a notable decline in the incidence of serotypes 3, 7F and 19A by 2013–2014 (IRR: 0·56, 0·44, 0·35 respectively), which contributed to an overall fall of the IPD in adults ⩾65 years of age in the UK (IRR: 0·75) [6]. The Irish data display a similar decline in 7F (IRR 0·49) but in contrast, there were increases in both serotype 3 (IRR 1·76) and 19A (IRR 1·40) by 2015–2016 in comparison with pre-PCV13 year 2009–2010, which led to no overall change in the incidence of IPD in adults ⩾65 years of age over the surveillance period (IRR 1·01). These two serotypes were also the predominant serotypes in most other years (Supplementary Tables 1–3). Surveillance in the USA has also shown an overall decline in IPD in adults ⩾65 years of age from 2012–2013, which was driven by a decline in PCV13-7 serotypes (58%), in particular serotypes 19A and 7F (58–72%) [9].

The difference in incidence of PCV-serotype infections may partly be due to differences in infant vaccine schedules. Both the UK and Ireland have a similar 2 + 1 infant immunisation schedule with a catch-up campaign for children <2 years of age and have maintained a high vaccine uptake rate of >90% [20, 36]. However, there were minor differences in the months of immunisation (2, 4, 12 months in UK and 2, 6, 12 months in Ireland) and introduction dates (PCV7 was introduced to the immunisation schedule in the UK in September 2006 and September 2008 in Ireland). Both countries introduced PCV13 in 2010, without a catch-up campaign [6, 19]. As of 2015, Ireland switched to administering a final dose of PCV13 at 13 months to accommodate vaccination with the meningitis type B infection at 12 months. The USA implemented a 3 + 1 infant immunisation schedule (2, 4, 6 and 12–15 months) for PCV7 in 2000 and PCV13 in 2010 [9]. These differences may have also impacted on serotypes associated with colonisation within the paediatric population and lead to less herd-protection. However, despite differences in schedules, the incidence of PCV13-7 serotypes in the paediatric population fell significantly in Ireland following the introduction of PCV13 and is similar to what has been reported in other countries [6, 8, 9].

Moreover, the USA has observed a smaller increase in non-PCV serotypes by 2012 (7%) compared with our data where we observed an increase in IR of 13·4/100 000 for PPV23-PCV13 and NVT from 2007–2008 to 2015–2016, data derived from calculating difference in IR for PPV23-PCV + NVT, as listed in Table 1. By 2012–2013 we had already observed a doubling increase in non-PCV serotypes (Figure 2), which continued to increase for both PPV23-PCV13 (IRR 2·17) and NVTs (IRR 3·43) (Table 1). The UK, also reported a more modest increase in non-PCV serotype infections in adults ⩾65 years (IRR 1·25) in comparison with our data. The predominant non-PCV vaccine serotypes associated with IPD in our data include serotypes 8, 12F, 22F, 33F, which are all included in the PPV23 vaccine, and two serotypes that are not included in the current PPV23 or PCV13, serotypes 15A and 35B. These two serotypes are also frequently associated with resistance.

The effectiveness of PPV23 in the elderly is uncertain as this is almost exclusively based on observations studies that are prone to confounding variables, particularly its use amongst healthy individuals, which is impossible to fully correct for. Given that the incidence of PCV13-7 serotypes has remained high in Ireland, coupled with increasing PPV23-PCV13 serotypes; it is likely that introducing one dose of PCV13 in addition to PPV23 for at-risk adults or those aged ⩾65 years of age could reduce the burden of IPD in adults. The USA has already updated the vaccination schedule to include one dose of PCV13 for adults ⩾65 years of age in order to further reduce the burden of IPD, despite a decline in PCV13 from the childhood vaccination schedule [15]. However, the vaccination uptake rate of PPV23 would need to be improved from 27–36% in Ireland to reduce the burden of IPD [23]. Bedford et al. found that approximately 80% of older persons in Ireland would consider availing of the pneumococcal vaccine from their doctor if requested [37]. Alternatively, recognising the opportunity to vaccinate individuals while in medical facilities may improve uptake rates [38]. It is likely that other co-morbidities contribute to the high rate of IPD in Ireland. A recent EU report found that Ireland had a higher mortality rate than the EU average for a number of respiratory related diseases including asthma (1·7 vs. 1·3/100 000), pneumonia (Ireland: 40·3 vs. EU average: 27·5/100 000), chronic respiratory illness (63·7 vs. 38·3/100 000), and other respiratory diseases (62·0 vs. 37·0/100 000) [39]. Factors such as poor diet, smoking and poor awareness of lung disease may also contribute to increased risk of infection in the adult population [40]. Interestingly, increased interaction with children, such as the provision of childcare, may also contribute to carriage of pneumococcal serotypes in the older adult population [41].

Vaccine replacement serotypes are emerging in both adult and paediatric cohorts [6, 8, 9, 11, 16, 18] and the proportion of serotypes varies in different regions with no one or two ‘leading’ serotypes emerging in multiple sites, in comparison with the previous emergence of 7F and 19A [18]. As a result, higher valency vaccines to include a number of emerging serotypes or new vaccine targets that move away from serotype specific differences may be needed to address this challenge [42].

There are some limitations associated with the use of surveillance studies for comparison of incidence rates over several years. First, diagnostic and referral policies vary over time and between referring hospitals. However, the results of a recent user survey of clinical laboratories in Ireland have confirmed that despite the introduction of new molecular technology, the use of routine culture techniques remains the ‘gold standard’ for the detection of S. pneumoniae from samples from sterile sites. Moreover, the number of case notifications and referred isolates is monitored on a quarterly basis and notable changes are discussed directly with the hospitals. It is also important to note that the statutory obligation of notifying all confirmed IPD cases in Ireland has been in place since 2004 and has not changed since the introduction of typing services in 2007. Matching of individual serotype results obtained from samples sent to the IPRL with notification data has also allowed us to detect any discrepancies between the numbers notified and those referred for typing. Second, an increase in the percentage of cases serotyped could lead to biased estimates of the vaccination-effect and the degree of serotype replacement. The number of isolates collected over the 9 years is relatively small (total n = 1387), which may result in stochastic changes. However, this limitation is due to the small population in Ireland in comparison with bigger countries with access to larger culture collections. In order to correct this our data are also stratified using population statistics in order to allow comparison with countries with larger population and the use of 95% confidence intervals for all incidence rate comparisons. Moreover, as a result of matching notification data with typing results, we calculate that 86% (range 79–92%) of all IPD cases reported from adults ⩾65 years of age from July 2007 to June 2016 were typed, with no discernible time trend. This also provides confidence that the trends observed are an accurate representation of trends of IPD in Ireland during this period. Consequently, we are confident that the trends reported in this paper are a reliable reflection of serotype distribution associated with IPD in Ireland. Finally, while the vaccination uptake rates are monitored as part of the infant immunisation scheme, there is currently no similar scheme for routinely monitoring pneumococcal vaccination uptake in adults, aside from intermittent surveys taken in 2005, 2010 and 2013, which indicate that only between 27 and 36% of adults ⩾65 years of age had received the vaccine [23]. This may be considered a limitation of this study as it is difficult to accurately estimate the direct effects of vaccination without precise monitoring of vaccination uptake in adults. Our groups are currently involved in a European study assessing the vaccination uptake rate in adults in more detail and we are hoping this will also allow us to assess the numbers needed to vaccinate in order to provide protection for this aging population. It would also be of great interest to further evaluate the figures surrounding the switch from PCV7 to PCV13 in the paediatric population in more detail; however, aside from overall uptake rates this data are not available to us at this time [19].

In conclusion, the number of infections caused by vaccine serotypes has fallen in Ireland but most of this is from serotypes covered in PCV7, which provided herd-protection for adults promptly after the vaccine was introduced. However, the number of IPD infections associated with PCV13-7 serotypes has remained relatively unchanged despite the introduction of PCV13 over 5 years ago and those covered in PPV23-PCV13 and NVTs have increased significantly. As a result, the administration of both PCV13 and PPV23 in adults may reduce the incidence of IPD infections and should be considered.

SUPPLEMENTARY MATERIAL

The supplementary material for this article can be found at https://doi.org/10.1017/S0950268817001194.

ACKNOWLEDGEMENTS

We wish to thank all the laboratory scientists and consultant microbiologists in Irish hospitals for forwarding pneumococcal isolates and all the staff in the Departments of Public Health involved in the surveillance of pneumococcal disease in Ireland.

This work is partly funded by the Health Protection Surveillance Centre (Ireland). Additional funding has been provided through an unrestricted research grant from Pfizer (Ireland). The funders had no role in the collection, analysis, interpretation of data or in the writing of and decision to submit the article for publication.

DECLARATION OF INTEREST

HH has recently received research funds from Astellas and Pfizer, and has received lecture and other fees from Cepheid and Astellas. MCo, IV and MMcE have received funding support from Pfizer.

AUTHORS CONTRIBUTIONS

HH, MCa, SC and DO'F were involved in the establishment of pneumococcal serotyping service. IV MMcE and MCo have carried out the serotyping and antimicrobial susceptibility testing and JM, MF, SM, SC, DO'F and RC have developed and led national surveillance of IPD. MCo, HH, IV and RC have drafted the manuscript which has been reviewed and agreed by all.

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