Skip to main content
×
Home
    • Aa
    • Aa
  • Get access
    Check if you have access via personal or institutional login
  • Cited by 13
  • Cited by
    This article has been cited by the following publications. This list is generated based on data provided by CrossRef.

    Attwood, S.W. 2009. The Mekong.


    Steinauer, Michelle L. Blouin, Michael S. and Criscione, Charles D. 2010. Applying evolutionary genetics to schistosome epidemiology. Infection, Genetics and Evolution, Vol. 10, Issue. 4, p. 433.


    Costa, Gabriel C. and Schlupp, Ingo 2010. Biogeography of the Amazon molly: ecological niche and range limits of an asexual hybrid species. Global Ecology and Biogeography,


    Han, Ze-Guang Brindley, Paul J. Wang, Sheng-Yue and Chen, Zhu 2009. Schistosoma Genomics: New Perspectives on Schistosome Biology and Host-Parasite Interaction. Annual Review of Genomics and Human Genetics, Vol. 10, Issue. 1, p. 211.


    Devkota, Ramesh Brant, Sara V. and Loker, Eric S. 2016. A genetically distinct Schistosoma from Radix luteola from Nepal related to Schistosoma turkestanicum: A phylogenetic study of schistosome and snail host. Acta Tropica, Vol. 164, p. 45.


    Swain, Martin T. Larkin, Denis M. Caffrey, Conor R. Davies, Stephen J. Loukas, Alex Skelly, Patrick J. and Hoffmann, Karl F. 2011. Schistosoma comparative genomics: integrating genome structure, parasite biology and anthelmintic discovery. Trends in Parasitology, Vol. 27, Issue. 12, p. 555.


    Chrisanfova, G. G. Lopatkin, A. A. Shestak, A. G. Mishchenkov, V. A. Zhukova, T. V. Akimova, L. N. and Semyenova, S. K. 2011. Polymorphism of the cox1 mtDNA gene from cercarial isolates of the avian schistosome Bilharziella polonica (Trematoda: Schistosomatidae) from Belarussian lakes. Russian Journal of Genetics, Vol. 47, Issue. 5, p. 603.


    Attwood, Stephen W. Fatih, Farrah A. Campbell, Ian and Upatham, E. Suchart 2008. The distribution of Mekong schistosomiasis, past and future: Preliminary indications from an analysis of genetic variation in the intermediate host. Parasitology International, Vol. 57, Issue. 3, p. 256.


    Devkota, Ramesh Brant, Sara V. and Loker, Eric S. 2015. The Schistosoma indicum species group in Nepal: presence of a new lineage of schistosome and use of the Indoplanorbis exustus species complex of snail hosts. International Journal for Parasitology, Vol. 45, Issue. 13, p. 857.


    Webster, Bonnie L. and Littlewood, D. Timothy J. 2012. Mitochondrial gene order change in Schistosoma (Platyhelminthes: Digenea: Schistosomatidae). International Journal for Parasitology, Vol. 42, Issue. 3, p. 313.


    Zhao, Guang-Hui Li, Juan Blair, David Li, Xiao-Yan Elsheikha, Hany M. Lin, Rui-Qing Zou, Feng-Cai and Zhu, Xing-Quan 2012. Biotechnological advances in the diagnosis, species differentiation and phylogenetic analysis of Schistosoma spp.. Biotechnology Advances, Vol. 30, Issue. 6, p. 1381.


    Zhao, Guang-Hui Blair, David Li, Xiao-Yan Li, Juan Lin, Rui-Qing Zou, Feng-Cai Sugiyama, Hiromu Mo, Xi-Hao Yuan, Zi-Guo Song, Hui-Qun and Zhu, Xing-Quan 2011. The ribosomal intergenic spacer (IGS) region in Schistosoma japonicum: Structure and comparisons with related species. Infection, Genetics and Evolution, Vol. 11, Issue. 3, p. 610.


    Attwood, Stephen W. 2010. Important Helminth Infections in Southeast Asia: Diversity and Potential for Control and Elimination, Part B.


    ×

A DNA sequence-based study of the Schistosoma indicum (Trematoda: Digenea) group: population phylogeny, taxonomy and historical biogeography

  • S. W. ATTWOOD (a1) (a2), F. A. FATIH (a2), M. M. H. MONDAL (a3), M. A. ALIM (a3), S. FADJAR (a4), R. P. V. J. RAJAPAKSE (a5) and D. ROLLINSON (a2)
  • DOI: http://dx.doi.org/10.1017/S0031182007003411
  • Published online: 06 September 2007
Abstract
SUMMARY

Partial (DNA) sequences were collected for 2 mitochondrial loci (Srrna and Lrrna, the rrnS and rrnL rRNA genes respectively) for Schistosoma indicum group species from 4 Southeast Asian countries. The samples included 7 populations, 4 of which were previously unstudied. In 11 cases the combination of locus and population was new. The aim of the study was to provide a phylogeny based on new independent data and multiple populations (earlier studies had mostly used a common set of field samples or laboratory lines) and to examine interrelationships and phylogeography within this species group. Paraphyly of the S. indicum group was confirmed, as was the basal position of Schistosoma incognitum in the Schistosoma phylogeny. Southeast Asian Schistosoma spindale and S. incognitum populations were shown to fall into their respective con-specific cohesive groupings. Estimated divergence times for these taxa were shown to be related to Pleistocene changes in sea level and the radiation of definitive host groups. A revised phylogeographical model is proposed in the light of these findings.

Copyright
Corresponding author
*Corresponding author: State Key Laboratory of Biotherapy, Gaopeng Street, Keyuan Road 4, Chengdu 610041, China. Tel: +86 28 85164098. Fax: +86 28 85164092. E-mail: swahuaxi@yahoo.com
Linked references
Hide All

This list contains references from the content that can be linked to their source. For a full set of references and notes please see the PDF or HTML where available.



S. C. Barker and D. Blair (1996). Molecular phylogeny of Schistosoma species supports traditional groupings within the genus. Journal of Parasitology 82, 292298.

L. Chitsulo , D. Engels , A. Montresor and L. Savioli (2000). The global status of schistosomiasis and its control. Acta Tropica 77, 4151.

R. J. Dejong , J. A. T. Morgan , W. D. Wilson , M. H. Al-Jaser , C. C. Appleton , G. Coulibaly , M. J. Doenhoff , W. Haas , M. A. Idris , L. A. Magalhaes , H. Mone , G. Mouahid , L. Mubila , J.-P. Pointier , J. P. Webster , E. M. Zanotti-Magalhaes , W. L. Paraense , G. M. Mkoji and E. S. Loker (2003). Phylogeography of Biomphalaria glabrata and B. pfeifferi, the two most important hosts of Schistosoma mansoni in the New and Old World tropics. Molecular Ecology 12, 30413056.

R. Desalle , T. Freedman , E. M. Prager and A. C. Wilson (1987). Tempo and mode of sequence evolution in mitochondrial DNA of Hawaiian Drosophila. Journal of Molecular Evolution 26, 157164.

L. Despres , D. Imbert-Establet , C. Combes and F. Bonhomme (1992). Molecular evidence linking hominid evolution to recent radiation of schistosomes (Platyhelminthes: Trematoda). Molecular Phylogenetics and Evolution 1, 295304.

S. V. Edwards and P. Beerli (2000). Perspective: gene divergence, population divergence, and the variance in coalescence time in phylogeographic studies. Evolution 54, 18391854.

J. S. Farris , M. Kallersjo , A. G. Kluge and C. Bult (1995). Constructing a significance test for incongruence. Systematic Biology 44, 570572.

J. Felsenstein (1988). Phylogenies from molecular sequences: inference and reliability. Annual Reviews of Genetics 22, 521565.

P. G. Foster (2004). Modelling compositional heterogeneity. Systematic Biology 53, 485495.

P. D. N. Hebert , S. Ratnasingham and J. R. Dewaard (2003). Barcoding animal life: cytochrome c oxidase subunit divergences among closely related species. Proceedings of the Royal Society of London, B 270, S96S99.

M. Holder and P. O. Lewis (2003). Phylogeny estimation: traditional and Bayesian approaches. Nature Reviews: Genetics 4, 275284.


B. Kolaczkowski and J. W. Thornton (2006). Is there a star tree paradox? Molecular Biology and Evolution 23, 18191823.

T. H. Le , D. Blair , T. Agatsuma , M. Iwagami , P.-F. Humair , N. J. H. Campbell , D. T. J. Littlewood , B. Peacock , D. A. Johnston , J. Bartley , D. Rollinson , E. A. Herniou , D. S. Zarlenga and D. P. McManus (2000 a). Phylogenies inferred from mitochondrial gene orders – a cautionary tale from the parasitic flatworms. Molecular Biology and Evolution 17, 11231125.

T. H. Le , D. Blair and D. P. McManus (2000 b). Mitochondrial genomes of human helminths and their use as markers in population genetics and phylogeny. Acta Tropica 77, 243256.

M. S. Y. Lee (2001). Uninformative characters and apparent conflict between molecules and morphology. Molecular Biology and Evolution 18, 676680.

P. O. Lewis , M. E. Holder and K. E. Holsinger (2005). Polytomies and Bayesian phylogenetic inference. Systematic Biology 54, 241253.

D. T. J. Littlewood , A. E. Lockyer , B. L. Webster , D. A. Johnston and T. H. Le (2006). The complete mitochondrial genomes of Schistosoma haematobium and Schistosoma spindale and the evolutionary history of mitochondrial genome changes among parasitic flatworms. Molecular Phylogenetics and Evolution 39, 452467.


C. Matthee , J. D. Burzlaft , J. F. Taylor and S. K. Davis (2001). Mining the mammalian genome for artiodactyl systematics. Systematic Biology 50, 367390.

J. A. T. Morgan , R. J. Dejong , F. Kazibwe , G. M. Mkoji and E. S. Loker (2003). A newly-identified lineage of Schistosoma. International Journal for Parasitology 33, 977985.

D. D. Pollock , D. J. Zwickl , J. A. Mcguire and D. M. Hillis (2002). Increased taxon sampling is advantageous for phylogenetic inference. Systematic Biology 51, 664671.

D. Posada and K. A. Crandall (1998). Modeltest: testing the model of DNA substitution. Bioinformatics 14, 817818.

F. Ronquist and J. P. Huelsenbeck (2003). MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19, 15721574.

J. Rozas and R. Rozas (1999). DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15, 174175.

H. Shimodaira and M. Hasegawa (1999). Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Molecular Biology and Evolution 16, 11141116.

S. D. Snyder and E. S. Loker (2000). Evolutionary relationships among the Schistosomatidae (Platyhelminthes: Digenea) and an Asian origin for Schistosoma. Journal of Parasitology 86, 283288.

V. R. Southgate , L.-A. Tchuem Tchuenté , J. Vercruysse and J. Jourdane (1995). Mating behaviour in mixed infections of Schistosoma haematobium and S. mattheei. Parasitological Research 81, 651656.

J. D. Thompson , D. G. Higgins and T. J. Gibson (1994). CLUSTAL W: improving the sensitivity of progressive mulitple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22, 46734680.

S. Van Dongen (2006). Prior specification in Bayesian statistics: three cautionary tales. Journal of Theoretical Biology 242, 90100.

B. L. Webster , V. R. Southgate and D. T. J. Littlewood (2006). A revision of the interrelationships of Schistosoma including the recently described Schistosoma guineensis. International Journal for Parasitology 36, 947955.

X. Xia , Z. Xie , M. Salemi , L. Chen and Y. Wang (2003). An index of substitution saturation and its application. Molecular Phylogenetics and Evolution 26, 17.

D. J. Zwickl and D. M. Hillis (2002). Increased taxon sampling greatly reduces phylogenetic error. Systematic Biology 51, 588598.

Recommend this journal

Email your librarian or administrator to recommend adding this journal to your organisation's collection.

Parasitology
  • ISSN: 0031-1820
  • EISSN: 1469-8161
  • URL: /core/journals/parasitology
Please enter your name
Please enter a valid email address
Who would you like to send this to? *
×

Keywords: