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Making informed clinical decisions based on individualised outcome predictions is the cornerstone of precision psychiatry. Prediction models currently employed in psychiatry rely on algorithms that map a statistical relationship between clinical features (predictors/risk factors) and subsequent clinical outcomes. They rely on associations that overlook the underlying causal structures within the data, including the presence of latent variables, and the evolution of predictors and outcomes over time. As a result, predictions from sparse associative models from routinely collected data are rarely actionable at an individual level. To be actionable, prediction models should address these shortcomings. We provide a brief overview of a general framework for the rationale for implementing causal and actionable predictions using counterfactual explanations to advance predictive modelling studies, which has translational implications. We have included an extensive glossary of terminology used in this paper and the literature (Supplementary Box 1) and provide a concrete example to demonstrate this conceptually, and a reading list for those interested in this field (Supplementary Box 2).
Accurate diagnosis of bipolar disorder (BPD) is difficult in clinical practice, with an average delay between symptom onset and diagnosis of about 7 years. A depressive episode often precedes the first manic episode, making it difficult to distinguish BPD from unipolar major depressive disorder (MDD).
Aims
We use genome-wide association analyses (GWAS) to identify differential genetic factors and to develop predictors based on polygenic risk scores (PRS) that may aid early differential diagnosis.
Method
Based on individual genotypes from case–control cohorts of BPD and MDD shared through the Psychiatric Genomics Consortium, we compile case–case–control cohorts, applying a careful quality control procedure. In a resulting cohort of 51 149 individuals (15 532 BPD patients, 12 920 MDD patients and 22 697 controls), we perform a variety of GWAS and PRS analyses.
Results
Although our GWAS is not well powered to identify genome-wide significant loci, we find significant chip heritability and demonstrate the ability of the resulting PRS to distinguish BPD from MDD, including BPD cases with depressive onset (BPD-D). We replicate our PRS findings in an independent Danish cohort (iPSYCH 2015, N = 25 966). We observe strong genetic correlation between our case–case GWAS and that of case–control BPD.
Conclusions
We find that MDD and BPD, including BPD-D are genetically distinct. Our findings support that controls, MDD and BPD patients primarily lie on a continuum of genetic risk. Future studies with larger and richer samples will likely yield a better understanding of these findings and enable the development of better genetic predictors distinguishing BPD and, importantly, BPD-D from MDD.
Adolescence and young adulthood are sensitive developmental periods to environmental influences. Investigating pre-emptive measures against stressors, such as those associated with the COVID-19 pandemic, on mental health is crucial. We aimed to synthesize evidence on pre-pandemic resilience factors shaping youth mental health outcomes during this period. For this pre-registered systematic review, we searched seven databases for longitudinal studies of youth populations affected by the COVID-19 pandemic, assessing a priori defined resilience factors at the individual, family, or community level before the pandemic. Studies required validated mental health or wellbeing measures collected both before and during the pandemic. Study quality was assessed using the corresponding NIH Quality Assessment Tool. From 4,419 unique records, 32 studies across 12 countries were included, using 46 distinct resilience measures. Due to the heterogeneity of study designs, we applied a narrative synthesis approach, finding that resilience factors were generally associated with better mental health outcomes both prior to and during the pandemic. However, most factors did not mitigate pandemic-related mental health effects. Nonetheless, family-level resilience factors emerged as promising under specific conditions. Study quality was generally fair, with concerns in resilience assessment and sampling quality. Future research should prioritize rigorous study designs and comprehensive resilience assessments.
The association between cannabis and psychosis is established, but the role of underlying genetics is unclear. We used data from the EU-GEI case-control study and UK Biobank to examine the independent and combined effect of heavy cannabis use and schizophrenia polygenic risk score (PRS) on risk for psychosis.
Methods
Genome-wide association study summary statistics from the Psychiatric Genomics Consortium and the Genomic Psychiatry Cohort were used to calculate schizophrenia and cannabis use disorder (CUD) PRS for 1098 participants from the EU-GEI study and 143600 from the UK Biobank. Both datasets had information on cannabis use.
Results
In both samples, schizophrenia PRS and cannabis use independently increased risk of psychosis. Schizophrenia PRS was not associated with patterns of cannabis use in the EU-GEI cases or controls or UK Biobank cases. It was associated with lifetime and daily cannabis use among UK Biobank participants without psychosis, but the effect was substantially reduced when CUD PRS was included in the model. In the EU-GEI sample, regular users of high-potency cannabis had the highest odds of being a case independently of schizophrenia PRS (OR daily use high-potency cannabis adjusted for PRS = 5.09, 95% CI 3.08–8.43, p = 3.21 × 10−10). We found no evidence of interaction between schizophrenia PRS and patterns of cannabis use.
Conclusions
Regular use of high-potency cannabis remains a strong predictor of psychotic disorder independently of schizophrenia PRS, which does not seem to be associated with heavy cannabis use. These are important findings at a time of increasing use and potency of cannabis worldwide.
It remains unknown whether severe mental disorders contribute to fatally harmful effects of physical illness.
Aims
To investigate the risk of all-cause death and loss of life-years following the onset of a wide range of physical health conditions in people with severe mental disorders compared with matched counterparts who had only these physical health conditions, and to assess whether these associations can be fully explained by this patient group having more clinically recorded physical illness.
Method
Using Czech national in-patient register data, we identified individuals with 28 physical health conditions recorded between 1999 and 2017, separately for each condition. In these people, we identified individuals who had severe mental disorders recorded before the physical health condition and exactly matched them with up to five counterparts who had no recorded prior severe mental disorders. We estimated the risk of all-cause death and lost life-years following each of the physical health conditions in people with pre-existing severe mental disorders compared with matched counterparts without severe mental disorders.
Results
People with severe mental disorders had an elevated risk of all-cause death following the onset of 7 out of 9 broadly defined and 14 out of 19 specific physical health conditions. People with severe mental disorders lost additional life-years following the onset of 8 out 9 broadly defined and 13 out of 19 specific physical health conditions. The vast majority of results remained robust after considering the potentially confounding role of somatic multimorbidity and other clinical and sociodemographic factors.
Conclusions
A wide range of physical illnesses are more likely to result in all-cause death in people with pre-existing severe mental disorders. This premature mortality cannot be fully explained by having more clinically recorded physical illness, suggesting that physical disorders are more likely to be fatally harmful in this patient group.
A clinical tool to estimate the risk of treatment-resistant schizophrenia (TRS) in people with first-episode psychosis (FEP) would inform early detection of TRS and overcome the delay of up to 5 years in starting TRS medication.
Aims
To develop and evaluate a model that could predict the risk of TRS in routine clinical practice.
Method
We used data from two UK-based FEP cohorts (GAP and AESOP-10) to develop and internally validate a prognostic model that supports identification of patients at high-risk of TRS soon after FEP diagnosis. Using sociodemographic and clinical predictors, a model for predicting risk of TRS was developed based on penalised logistic regression, with missing data handled using multiple imputation. Internal validation was undertaken via bootstrapping, obtaining optimism-adjusted estimates of the model's performance. Interviews and focus groups with clinicians were conducted to establish clinically relevant risk thresholds and understand the acceptability and perceived utility of the model.
Results
We included seven factors in the prediction model that are predominantly assessed in clinical practice in patients with FEP. The model predicted treatment resistance among the 1081 patients with reasonable accuracy; the model's C-statistic was 0.727 (95% CI 0.723–0.732) prior to shrinkage and 0.687 after adjustment for optimism. Calibration was good (expected/observed ratio: 0.999; calibration-in-the-large: 0.000584) after adjustment for optimism.
Conclusions
We developed and internally validated a prediction model with reasonably good predictive metrics. Clinicians, patients and carers were involved in the development process. External validation of the tool is needed followed by co-design methodology to support implementation in early intervention services.
Marine litter poses a complex challenge in Indonesia, necessitating a well-informed and coordinated strategy for effective mitigation. This study investigates the seasonality of plastic concentrations around Sulawesi Island in central Indonesia during monsoon-driven wet and dry seasons. By using open data and methodologies including the HYCOM and Parcels models, we simulated the dispersal of plastic waste over 3 months during both the southwest and northeast monsoons. Our research extended beyond data analysis, as we actively engaged with local communities, researchers and policymakers through a range of outreach initiatives, including the development of a web application to visualize model results. Our findings underscore the substantial influence of monsoon-driven currents on surface plastic concentrations, highlighting the seasonal variation in the risk to different regional seas. This study adds to the evidence provided by coarser resolution regional ocean modelling studies, emphasizing that seasonality is a key driver of plastic pollution within the Indonesian archipelago. Inclusive international collaboration and a community-oriented approach were integral to our project, and we recommend that future initiatives similarly engage researchers, local communities and decision-makers in marine litter modelling results. This study aims to support the application of model results in solutions to the marine litter problem.
Incidence of first-episode psychosis (FEP) varies substantially across geographic regions. Phenotypes of subclinical psychosis (SP), such as psychotic-like experiences (PLEs) and schizotypy, present several similarities with psychosis. We aimed to examine whether SP measures varied across different sites and whether this variation was comparable with FEP incidence within the same areas. We further examined contribution of environmental and genetic factors to SP.
Methods
We used data from 1497 controls recruited in 16 different sites across 6 countries. Factor scores for several psychopathological dimensions of schizotypy and PLEs were obtained using multidimensional item response theory models. Variation of these scores was assessed using multi-level regression analysis to estimate individual and between-sites variance adjusting for age, sex, education, migrant, employment and relational status, childhood adversity, and cannabis use. In the final model we added local FEP incidence as a second-level variable. Association with genetic liability was examined separately.
Results
Schizotypy showed a large between-sites variation with up to 15% of variance attributable to site-level characteristics. Adding local FEP incidence to the model considerably reduced the between-sites unexplained schizotypy variance. PLEs did not show as much variation. Overall, SP was associated with younger age, migrant, unmarried, unemployed and less educated individuals, cannabis use, and childhood adversity. Both phenotypes were associated with genetic liability to schizophrenia.
Conclusions
Schizotypy showed substantial between-sites variation, being more represented in areas where FEP incidence is higher. This supports the hypothesis that shared contextual factors shape the between-sites variation of psychosis across the spectrum.
Based on the best-selling Stahl's Prescriber's Guide, this essential guide to psychiatric prescribing has been developed by leading psychiatrists and medical students from the University of Cambridge to support all mental health professionals in achieving optimal care for their patients. Written with the authority of evidence and the guidance of clinical wisdom the formulary covers the psychotropic medications used in daily care including dosing recommendations and drug interactions. With its easy-to-use, full-colour template-driven navigation system, the book combines evidence-based data with clinically informed advice, including guidance on prescribing for children and adolescents and people with addictions. Drugs are presented in the same format to facilitate rapid access to information and are broken down into sections designated by a unique colour background thereby clearly distinguishing information presented on therapeutics, side effects, dosing and use, and the art of psychopharmacology. Popular prescribing 'tips and pearls are included throughout.
Edited by
Sepehr Hafizi, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,Peter B. Jones, University of Cambridge,Stephen M. Stahl, University of California, San Diego
Edited in association with
Veronika Dobler, Cambridgeshire and Peterborough NHS Foundation Trust,Liliana Galindo, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,George Griffiths, Cambridgeshire and Peterborough NHS Foundation Trust,Neil Hunt, University of Cambridge,Mohammad Malkera, University of Cambridge,Asha Praseedom, Cambridgeshire and Peterborough NHS Foundation Trust,Pranathi Ramachandra, Cambridgeshire and Peterborough NHS Foundation Trust,Judy Rubinsztein, University of Cambridge,Shamim Ruhi, Norfolk and Suffolk NHS Foundation Trust
Edited by
Sepehr Hafizi, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,Peter B. Jones, University of Cambridge,Stephen M. Stahl, University of California, San Diego
Edited in association with
Veronika Dobler, Cambridgeshire and Peterborough NHS Foundation Trust,Liliana Galindo, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,George Griffiths, Cambridgeshire and Peterborough NHS Foundation Trust,Neil Hunt, University of Cambridge,Mohammad Malkera, University of Cambridge,Asha Praseedom, Cambridgeshire and Peterborough NHS Foundation Trust,Pranathi Ramachandra, Cambridgeshire and Peterborough NHS Foundation Trust,Judy Rubinsztein, University of Cambridge,Shamim Ruhi, Norfolk and Suffolk NHS Foundation Trust
Edited by
Sepehr Hafizi, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,Peter B. Jones, University of Cambridge,Stephen M. Stahl, University of California, San Diego
Edited in association with
Veronika Dobler, Cambridgeshire and Peterborough NHS Foundation Trust,Liliana Galindo, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,George Griffiths, Cambridgeshire and Peterborough NHS Foundation Trust,Neil Hunt, University of Cambridge,Mohammad Malkera, University of Cambridge,Asha Praseedom, Cambridgeshire and Peterborough NHS Foundation Trust,Pranathi Ramachandra, Cambridgeshire and Peterborough NHS Foundation Trust,Judy Rubinsztein, University of Cambridge,Shamim Ruhi, Norfolk and Suffolk NHS Foundation Trust
Edited by
Sepehr Hafizi, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,Peter B. Jones, University of Cambridge,Stephen M. Stahl, University of California, San Diego
Edited in association with
Veronika Dobler, Cambridgeshire and Peterborough NHS Foundation Trust,Liliana Galindo, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,George Griffiths, Cambridgeshire and Peterborough NHS Foundation Trust,Neil Hunt, University of Cambridge,Mohammad Malkera, University of Cambridge,Asha Praseedom, Cambridgeshire and Peterborough NHS Foundation Trust,Pranathi Ramachandra, Cambridgeshire and Peterborough NHS Foundation Trust,Judy Rubinsztein, University of Cambridge,Shamim Ruhi, Norfolk and Suffolk NHS Foundation Trust
Edited by
Sepehr Hafizi, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,Peter B. Jones, University of Cambridge,Stephen M. Stahl, University of California, San Diego
Edited in association with
Veronika Dobler, Cambridgeshire and Peterborough NHS Foundation Trust,Liliana Galindo, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,George Griffiths, Cambridgeshire and Peterborough NHS Foundation Trust,Neil Hunt, University of Cambridge,Mohammad Malkera, University of Cambridge,Asha Praseedom, Cambridgeshire and Peterborough NHS Foundation Trust,Pranathi Ramachandra, Cambridgeshire and Peterborough NHS Foundation Trust,Judy Rubinsztein, University of Cambridge,Shamim Ruhi, Norfolk and Suffolk NHS Foundation Trust
Edited by
Sepehr Hafizi, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,Peter B. Jones, University of Cambridge,Stephen M. Stahl, University of California, San Diego
Edited in association with
Veronika Dobler, Cambridgeshire and Peterborough NHS Foundation Trust,Liliana Galindo, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,George Griffiths, Cambridgeshire and Peterborough NHS Foundation Trust,Neil Hunt, University of Cambridge,Mohammad Malkera, University of Cambridge,Asha Praseedom, Cambridgeshire and Peterborough NHS Foundation Trust,Pranathi Ramachandra, Cambridgeshire and Peterborough NHS Foundation Trust,Judy Rubinsztein, University of Cambridge,Shamim Ruhi, Norfolk and Suffolk NHS Foundation Trust
Edited by
Sepehr Hafizi, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,Peter B. Jones, University of Cambridge,Stephen M. Stahl, University of California, San Diego
Edited in association with
Veronika Dobler, Cambridgeshire and Peterborough NHS Foundation Trust,Liliana Galindo, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,George Griffiths, Cambridgeshire and Peterborough NHS Foundation Trust,Neil Hunt, University of Cambridge,Mohammad Malkera, University of Cambridge,Asha Praseedom, Cambridgeshire and Peterborough NHS Foundation Trust,Pranathi Ramachandra, Cambridgeshire and Peterborough NHS Foundation Trust,Judy Rubinsztein, University of Cambridge,Shamim Ruhi, Norfolk and Suffolk NHS Foundation Trust
Edited by
Sepehr Hafizi, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,Peter B. Jones, University of Cambridge,Stephen M. Stahl, University of California, San Diego
Edited in association with
Veronika Dobler, Cambridgeshire and Peterborough NHS Foundation Trust,Liliana Galindo, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,George Griffiths, Cambridgeshire and Peterborough NHS Foundation Trust,Neil Hunt, University of Cambridge,Mohammad Malkera, University of Cambridge,Asha Praseedom, Cambridgeshire and Peterborough NHS Foundation Trust,Pranathi Ramachandra, Cambridgeshire and Peterborough NHS Foundation Trust,Judy Rubinsztein, University of Cambridge,Shamim Ruhi, Norfolk and Suffolk NHS Foundation Trust
Edited by
Sepehr Hafizi, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,Peter B. Jones, University of Cambridge,Stephen M. Stahl, University of California, San Diego
Edited in association with
Veronika Dobler, Cambridgeshire and Peterborough NHS Foundation Trust,Liliana Galindo, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,George Griffiths, Cambridgeshire and Peterborough NHS Foundation Trust,Neil Hunt, University of Cambridge,Mohammad Malkera, University of Cambridge,Asha Praseedom, Cambridgeshire and Peterborough NHS Foundation Trust,Pranathi Ramachandra, Cambridgeshire and Peterborough NHS Foundation Trust,Judy Rubinsztein, University of Cambridge,Shamim Ruhi, Norfolk and Suffolk NHS Foundation Trust
Edited by
Sepehr Hafizi, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,Peter B. Jones, University of Cambridge,Stephen M. Stahl, University of California, San Diego
Edited in association with
Veronika Dobler, Cambridgeshire and Peterborough NHS Foundation Trust,Liliana Galindo, Cambridgeshire and Peterborough NHS Foundation Trust and University of Cambridge,George Griffiths, Cambridgeshire and Peterborough NHS Foundation Trust,Neil Hunt, University of Cambridge,Mohammad Malkera, University of Cambridge,Asha Praseedom, Cambridgeshire and Peterborough NHS Foundation Trust,Pranathi Ramachandra, Cambridgeshire and Peterborough NHS Foundation Trust,Judy Rubinsztein, University of Cambridge,Shamim Ruhi, Norfolk and Suffolk NHS Foundation Trust