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14 - Regularizing Neural Network for Phase Unwrapping

from Part III - Generative Models for Biomedical Imaging

Published online by Cambridge University Press:  15 September 2023

Jong Chul Ye
Affiliation:
Korea Advanced Institute of Science and Technology (KAIST)
Yonina C. Eldar
Affiliation:
Weizmann Institute of Science, Israel
Michael Unser
Affiliation:
École Polytechnique Fédérale de Lausanne
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Summary

Quantitative phase imaging (QPI) refers to label-free techniques that produce images containing morphological information. In this chapter, we focus on 2D phase imaging with a holographic setup. In such a setting, the complex-valued measurements contain both intensity and phase information. The phase is related to the distribution of the refractive index of the underlying specimen. In practice, the collected phase happens to be wrapped (i.e., modulo 2π of the original phase) and one gains quantitative information on the sample only once the measurements are unwrapped. The process of phase unwrapping relies on the solution of an inverse problem, for which numerous methods exist. However, it is challenging to unwrap the phases of particularly complex or thick specimens such as organoids. Under such extreme conditions, classical methods often exhibit unwrapping errors. In this chapter we first formulate the problem of phase unwrapping and review the existing methods to solve it. Then, we present an application of a regularizing neural network to phase unwrapping, which allows us to outline the advantages of a training-free approach, i.e., a deep image prior, over classical methods or supervised learning.

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Publisher: Cambridge University Press
Print publication year: 2023

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