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The aardvark (Oryecteropus afer) is a fossorial species with a widespread distribution across sub-Saharan Africa. It leaves distinctive tracks and traces of its presence, including large burrows. However, despite a substantial body fossil record, few trace fossils registered by aardvarks have been described. Its distribution range in southern Africa during historic and prehistoric times was probably broadly similar to that of today, with the addition of the currently submerged Palaeo-Agulhas Plain during much of the Pleistocene. Five new trace fossil sites have been identified in Pleistocene aeolianites on the Cape coast and are here interpreted with varying degrees of confidence as large burrows that were made by aardvarks. In addition, a possible aardvark tracksite has been identified. Together these add to the sparse paleoichnological evidence of aardvarks and add to the global ichnological record of large vertebrate burrows. While at this point the evidence does not warrant the proposal of new ichnotaxa, the findings may act to spur further identification of fossilized traces of aardvarks and other fossorial species on the Cape coast and beyond.
OBJECTIVES/GOALS: Our objective is to develop a Telenephrology dashboard for the 150,000 Veterans that obtain care through the Iowa City Veterans Affairs Health Care System. Our goal is to create a comprehensive and user-friendly tool for monitoring kidney health and facilitating remote nephrology consultations. METHODS/STUDY POPULATION: We structured our intervention according to the five stages of human-centered design: (1) Empathize, (2) Define, (3) Ideate, (4) Prototype and (5) Test. During the empathy stage, the principal investigator spent 10 hours immersed in the clinical setting observing how nephrologists approach a remote nephrology consultation. These observations were augmented by unstructured interviews with clinicians and patients to better understand the process and dynamics. Following this, a rapid ideation workshop was convened to generate creative solutions that balance technical requirements with the needs of clinicians and patients. These led to rapid prototyping and testing to identify what elements of the prototypes worked and which needed improvement. RESULTS/ANTICIPATED RESULTS: Through the empathy and define stages, three needs were identified: (1) clarity in visualizing data, (2) accuracy of information, and (3) balancing standardization with individualization. During the rapid ideation workshop, the concept of a four-frame dashboard was settled upon. This led to the creation of five prototypes, which were tested. These were reconciled and modified to make a final product. This final product, the Telenephrology Dashboard, contains 5 elements that support nephrologists and supporting staff: (1) a graph of kidney function over time, (2) tables synthesizing lab data, (3) options to drill down events to specific times, (4) customization of views, and (5) integration of kidney disease progression models. DISCUSSION/SIGNIFICANCE: A Telenephrology dashboard was created to facilitate remote nephrology consultations through a Human-Centered Design process. Our next steps include determining if this dashboard may improve end-user satisfaction, referring clinician satisfaction, access to specialist care, and patient outcomes.
The occurrence of palygorskite in some Tertiary sediments in eastern Saudi Arabia was studied. Mineralogical and chemical analyses were made of samples from two sections several meters thick from the Umm er Radhuma and Dammam Formations of Paleocene and Eocene periods, respectively. Layers of shales were observed within the sections of the dolomitic-calcitic limestone of the Umm er Radhuma Formation and of the dolomitic limestone of the Dammam Formation. After treatment for carbonate removal the shales consisted of more than 95% clay-size particles, most of which were <0.2-μm in size. Palygorskite was the main constituent of some of the shales, with minor amounts of gypsum, soluble salts, and carbonates. The association of gypsum and other salts with palygorskite in the shale suggests that palygorskite formed in closed-basin environments. The presence of palygorskite and the absence of other minerals in the clay fraction of the limestones also suggests that the palygorskite formed under marine conditions.
A kaolinite-rich bed (tonstein) and an associated bentonite in the upper part of Yegua Formation at College Station, east-central Texas, were formed by in situ weathering processes in a late Eocene swamp. X-ray powder diffraction, infrared spectroscopy, petrographic studies, and scanning and transmission electron microscopy not only show that dioctahedral smectite and coarsely crystalline kaolinite are the dominant minerals in the bentonite and tonstein, respectively, but that cryptocrystalline halloysite and kaolinite are localized along the weathering front (transitional zone) between the tonstein and the bentonite. As weathering progressed, the cryptocrystalline minerals gradually recrystallized to yield the coarse books and vermicular growths of kaolinite characteristic of the tonstein.
Small amounts of cristobalite, sanidine, and euhedral zircon crystals with liquid or gaseous inclusions accord with the formation of the bentonite by alteration of volcanic ash. Clinoptilolite in the lignitic layer and sandstone below the bentonite probably formed from ions that were released during alteration of the volcanic materials to smectite, but clinoptilolite in the tonstein and overlying strata appear to have formed after kaolinization of the bentonite.
The Arcanum mission is a proposed L-class mother-daughter spacecraft configuration for the Neptunian system, the mass and volume of which have been maximised to highlight the wide-ranging science the next generation of launch vehicles will enable. The spacecraft is designed to address a long-neglected but high-value region of the outer Solar System, showing that current advances make such a mission more feasible than ever before. This paper adds to a series on Arcanum and specifically provides progress on the study of areas identified as critical weaknesses by the 2013–2022 decadal survey and areas relevant to the recently published Voyage 2050 recommendations to the European Space Agency (ESA).
This article aims to explore the ethical issues arising from attempts to diversify genomic data and include individuals from underserved groups in studies exploring the relationship between genomics and health. We employed a qualitative synthesis design, combining data from three sources: 1) a rapid review of empirical articles published between 2000 and 2022 with a primary or secondary focus on diversifying genomic data, or the inclusion of underserved groups and ethical issues arising from this, 2) an expert workshop and 3) a narrative review. Using these three sources we found that ethical issues are interconnected across structural factors and research practices. Structural issues include failing to engage with the politics of knowledge production, existing inequities, and their effects on how harms and benefits of genomics are distributed. Issues related to research practices include a lack of reflexivity, exploitative dynamics and the failure to prioritise meaningful co-production. Ethical issues arise from both the structure and the practice of research, which can inhibit researcher and participant opportunities to diversify data in an ethical way. Diverse data are not ethical in and of themselves, and without being attentive to the social, historical and political contexts that shape the lives of potential participants, endeavours to diversify genomic data run the risk of worsening existing inequities. Efforts to construct more representative genomic datasets need to develop ethical approaches that are situated within wider attempts to make the enterprise of genomics more equitable.
The giant Cape zebra (Equus capensis) is one of the extinct Quaternary large mammal species of southern Africa, and the largest equid from the Quaternary of Africa. Twenty-six Pleistocene equid tracksites have been identified in aeolianites on the Cape south coast of South Africa. An age range of 161 ± 12 ka to 43 ± 4 ka has been established through Optically Stimulated Luminescence. More than half of the sites contain large-equid tracks, representing the first ichnosites attributed to E. capensis. Smaller equid tracks may have been registered by the quagga (E. quagga quagga). The abundance of E. capensis tracksites on the Cape south coast contrasts with the paucity of body fossils of the species from the region, contrasting with the impression obtained from the body fossil record that E. capensis was predominantly a west coast species in the region. The new data illustrate the capacity of the body fossil and trace fossil records to complement each other. The loss of suitable habitat provided by the Palaeo-Agulhas Plain was probably a contributing factor in the extinction of this large-bodied grazer. A long trackway at Driefontein, attributed to E. capensis, adds to a sparse global record of fossil horse trackways.
Although tortoises (Testudinidae) are a familiar clade of reptiles, with a body fossil record extending to at least the Eocene, hitherto no tortoise ichnosites have been described. Here, a number of sites attributed to tortoise trackmakers are identified within Pleistocene aeolianites on South Africa's Cape south coast. These date from late Marine Isotope Stage 6 to Marine Isotope Stage 4. The findings indicate large trackmakers, with evidence of a trackmaker length of more than a meter—substantially longer than the largest extant tortoises in southern Africa. This suggests either the presence of an extinct very large tortoise species, or that Pleistocene leopard tortoises in the region were larger than their descendants. Variations in substrate properties are responsible for a variety of track and trace forms. A mismatch exists between the reported ichnological evidence for large tortoises, and the regional archaeological and body fossil records, which almost exclusively comprise smaller tortoises. The findings illustrate the potential of ichnology to complement and augment the paleontological and archaeological records.
Barrett’s oesophagus (BE) is the precursor of oesophageal adenocarcinoma, which has become the most common type of oesophageal cancer in many Western populations. Existing evidence on diet and risk of BE predominantly comes from case–control studies, which are subject to recall bias in measurement of diet. We aimed to investigate the potential effect of diet, including macronutrients, carotenoids, food groups, specific food items, beverages and dietary scores, on risk of BE in over 20 000 participants of the Melbourne Collaborative Cohort Study. Diet at baseline (1990–1994) was measured using a food frequency questionnaire. The outcome was BE diagnosed between baseline and follow-up (2007–2010). Logistic regression models were used to estimate OR and 95 % CI for diet in relation to risk of BE. Intakes of leafy vegetables and fruit were inversely associated with risk of BE (highest v. lowest quartile: OR = 0·59; CI: 0·38, 0·94; P-trend = 0·02 and OR = 0·58; CI: 0·37, 0·93; P-trend = 0·02 respectively), as were dietary fibre and carotenoids. Stronger associations were observed for food than the nutrients found in them. Positive associations were observed for discretionary food (OR = 1·54; CI: 0·97, 2·44; P-trend = 0·04) and total fat intake (OR per 10 g/d = 1·11; CI: 1·00, 1·23), the association for fat was less robust in sensitivity analyses. No association was observed for meat, protein, dairy products or diet scores. Diet is a potential modifiable risk factor for BE. Public health and clinical guidelines that incorporate dietary recommendations could contribute to reduction in risk of BE and, thereby, oesophageal adenocarcinoma.
The objective of this study was to summarize peer-reviewed literature on the prevalence and concentration of non-O157 STEC (O26, O45, O103, O111, O121, and O145) serogroups and virulence genes (stx and eae) in fecal, hide, and carcass samples in pre- and peri-harvest cattle worldwide, using a systematic review of the literature and meta-analyses.
Data synthesis
Seventy articles were eligible for meta-analysis inclusion; data from 65 articles were subjected to random-effects meta-analysis models to yield fecal prevalence estimates. Meta-regression models were built to explore variables contributing to the between-study heterogeneity.
Results
Worldwide pooled non-O157 serogroup, STEC, and EHEC fecal prevalence estimates (95% confidence interval) were 4.7% (3.4–6.3%), 0.7% (0.5–0.8%), and 1.0% (0.8–1.1%), respectively. Fecal prevalence estimates significantly differed by geographic region (P < 0.01) for each outcome classification. Meta-regression analyses identified region, cattle type, and specimen type as factors that contribute to heterogeneity for worldwide fecal prevalence estimates.
Conclusions
The prevalence of these global foodborne pathogens in the cattle reservoir is widespread and highly variable by region. The scarcity of prevalence and concentration data for hide and carcass matrices identifies a large data gap in the literature as these are the closest proxies for potential beef contamination at harvest.
To examine associations between diet and risk of developing gastro-oesophageal reflux disease (GERD).
Design:
Prospective cohort with a median follow-up of 15·8 years. Baseline diet was measured using a FFQ. GERD was defined as self-reported current or history of daily heartburn or acid regurgitation beginning at least 2 years after baseline. Sex-specific logistic regressions were performed to estimate OR for GERD associated with diet quality scores and intakes of nutrients, food groups and individual foods and beverages. The effect of substituting saturated fat for monounsaturated or polyunsaturated fat on GERD risk was examined.
Setting:
Melbourne, Australia.
Participants:
A cohort of 20 926 participants (62 % women) aged 40–59 years at recruitment between 1990 and 1994.
Results:
For men, total fat intake was associated with increased risk of GERD (OR 1·05 per 5 g/d; 95 % CI 1·01, 1·09; P = 0·016), whereas total carbohydrate (OR 0·89 per 30 g/d; 95 % CI 0·82, 0·98; P = 0·010) and starch intakes (OR 0·84 per 30 g/d; 95 % CI 0·75, 0·94; P = 0·005) were associated with reduced risk. Nutrients were not associated with risk for women. For both sexes, substituting saturated fat for polyunsaturated or monounsaturated fat did not change risk. For both sexes, fish, chicken, cruciferous vegetables and carbonated beverages were associated with increased risk, whereas total fruit and citrus were associated with reduced risk. No association was observed with diet quality scores.
Conclusions:
Diet is a possible risk factor for GERD, but food considered as triggers of GERD symptoms might not necessarily contribute to disease development. Potential differential associations for men and women warrant further investigation.
Researchers have employed farm household models (FHMs) for policy analysis under the separability assumption. However, separability can fail, and the household's production and consumption decisions become simultaneous. Using 5 years of household data, the separability assumption among Ghana's cocoa-producing households is tested via heterogeneity of household adult males and females, household children, and hired and exchange labor. Results show labor is heterogeneous, implying a lack of separability. Simulation analysis also shows that ignoring nonseparability leads to an underestimation of policy effects. Thus, nonseparability in production and consumption decisions must be incorporated in FHMs developed for Ghanaian cocoa-producing households.
Lymphatic filariasis is a neglected tropical disease caused by roundworm parasites such as Brugia malayi that spread via a mosquito vector. In vitro culture of these parasites provides controlled conditions to understand parasite biology and provides a cheaper way to screen potential micro- and macrofilaricides. Published studies have used a wide array of approaches and metrics regarding in vitro cultures of B. malayi; as a result, drawing comparisons and identifying the reasons why inability to reproduce outcomes are difficult. This study sought to determine conditions that ensure reproducible outcomes and used evaluation metrics that are easily measured and can be automated to ensure objectivity. We found culturing B. malayi third-stage larvae (L3) in endothelial basal media supplemented with 20% fetal bovine serum and 75 µm ascorbic acid in a temperature- and humidity-controlled incubator produced better survival and molting rates as well as longer and more motile parasites than previously reported. The benefit of ascorbic acid seemed to be unique to L3 parasites, as the addition of ascorbic acid to adult parasites had no significant impact on survival or motility. The methods reported in this study will help in designing experiments for both parasite behaviour studies and drug screening applications for disease eradication.
Thirteen annually resolved accumulation-rate records covering the last ~200 years from the Pine Island–Thwaites and Ross drainage systems and the South Pole are used to examine climate variability over West Antarctica. Accumulation is controlled spatially by the topography of the ice sheet, and temporally by changes in moisture transport and cyclonic activity. A comparison of mean accumulation since 1970 at each site to the long-term mean indicates an increase in accumulation for sites located in the western sector of the Pine Island–Thwaites drainage system. Accumulation is negatively associated with the Southern Oscillation Index (SOI) for sites near the ice divide, and periods of sustained negative SOI (1940–42, 1991–95) correspond to above-mean accumulation at most sites. Correlations of the accumulation-rate records with sea-level pressure (SLP) and the SOI suggest that accumulation near the ice divide and in the Ross drainage system may be associated with the mid-latitudes. The post-1970 increase in accumulation coupled with strong SLP–accumulation-rate correlations near the coast suggests recent intensification of cyclonic activity in the Pine Island– Thwaites drainage system.
Plateau icefields occur commonly in glacierized areas and not uncommonly in glaciated mountains. We report on a glacierized area of plateaux and valleys centred round the highest peak Jiehkkevárri (1833 m) in the maritime Lyngen Alps, North Norway. Some valley glaciers are fed by steep, narrow plateau glacier outlets and/or ice avalanching from the plateaux over precipitous cliffs. Plateaux must therefore be considered as “contributing areas”, if they supply ice to valley systems below. Equilibrium line altitudes (ELAs) are calculated for the valley glaciers during the Little Ice Age (LIA), accounting for both input and no input of ice from plateaux above. The results show that ELAs may be at significantly higher altitudes when plateau/x are contributing ice mass. The response of plateau glaciers to climate amelioration since the end of the LIA is somewhat different to that of valley glaciers, which appear to be retreating markedly. These findings have significant implications for the interpretation of moraine systems, glacier dynamics, the construction and reconstruction of present and former ELAs, and palaeoclimates in glacierized and glaciated mountain plateau areas.
Shallow ice cores were obtained from widely distributed sites across the West Antarctic ice sheet, as part of the United States portion of the International Trans-Antarctic Scientific Expedition (US ITASE) program. The US ITASE cores have been dated by annual-layer counting, primarily through the identification of summer peaks in non-sea-salt sulfate (nssSO42–) concentration. Absolute dating accuracy of better than 2 years and relative dating accuracy better than 1 year is demonstrated by the identification of multiple volcanic marker horizons in each of the cores, Tambora, Indonesia (1815), being the most prominent. Independent validation is provided by the tracing of isochronal layers from site to site using high-frequency ice-penetrating radar observations, and by the timing of mid-winter warming events in stable-isotope ratios, which demonstrate significantly better than 1 year accuracy in the last 20 years. Dating precision to ±1 month is demonstrated by the occurrence of summer nitrate peaks and stable-isotope ratios in phase with nssSO42–, and winter-time sea-salt peaks out of phase, with phase variation of <1 month. Dating precision and accuracy are uniform with depth, for at least the last 100 years.
An updated compilation of published and new data of major-ion (Ca, Cl, K, Mg, Na, NO3, SO4) and methylsulfonate (MS) concentrations in snow from 520 Antarctic sites is provided by the national ITASE (International Trans-Antarctic Scientific Expedition) programmes of Australia, Brazil, China, Germany, Italy, Japan, Korea, New Zealand, Norway, the United Kingdom, the United States and the national Antarctic programme of Finland. The comparison shows that snow chemistry concentrations vary by up to four orders of magnitude across Antarctica and exhibit distinct geographical patterns. The Antarctic-wide comparison of glaciochemical records provides a unique opportunity to improve our understanding of the fundamental factors that ultimately control the chemistry of snow or ice samples. This paper aims to initiate data compilation and administration in order to provide a framework for facilitation of Antarctic-wide snow chemistry discussions across all ITASE nations and other contributing groups. The data are made available through the ITASE web page (http://www2.umaine.edu/itase/content/syngroups/snowchem.html) and will be updated with new data as they are provided. In addition, recommendations for future research efforts are summarized.