Investigations in recent years of the ecological structure and processes of the Southern Ocean have almost exclusively taken a bottom-up, forcing-by-physical-processes approach relating various species' population trends to climate change. Just 20 years ago, however, researchers focused on a broader set of hypotheses, in part formed around a paradigm positing interspecific interactions as central to structuring the ecosystem (forcing by biotic processes, top-down), and particularly on a “krill surplus” caused by the removal from the system of more than a million baleen whales. Since then, this latter idea has disappeared from favour with little debate. Moreover, it recently has been shown that concurrent with whaling there was a massive depletion of finfish in the Southern Ocean, a finding also ignored in deference to climate-related explanations of ecosystem change. We present two examples from the literature, one involving gelatinous organisms and the other involving penguins, in which climate has been used to explain species' population trends but which could better be explained by including species interactions in the modelling. We conclude by questioning the almost complete shift in paradigms that has occurred and discuss whether it is leading Southern Ocean marine ecological science in an instructive direction.

Due to its geographic isolation and relatively limited human impact, Antarctica is a promising location to study the eco-physiology of natural halogen cycles. Anaerobic sediments from Antarctic melt ponds on Ross Island and on the McMurdo Ice Shelf near Bratina Island were tested for activity of microbial reductive dehalogenation. Anaerobic enrichment cultures were established with potential electron donors and tetrachloroethene, trichloroethene, 2-bromophenol, 2-chlorophenol, 3-bromobenzoate, or 3-chlorobenozoate, as model halocarbon electron acceptors. Dechlorination of aromatic compounds was limited, whereas 2-bromophenol was debrominated in seven of the eight sediments and one site also showed debromination of 3-bromobenzoate. A most probable number estimate with 2-bromophenol at one site revealed 103–104 cultivatable debrominators per gram of sediment (wet weight). Chloroethene dechlorination was slow and primarily produced trichloroethene from tetrachloroethene, although both cis- and trans-dichloroethene were detected in certain enrichments upon extended incubation. These results demonstrate the presence of reductive dehalogenating activity in anaerobic, Antarctic melt-pond sediments and expand the known metabolic diversity of Antarctic microorganisms.

Aerial dispersal has been frequently proposed as a potential mechanism by which polar terrestrial arthropods are transported to, and settle the ice free habitats of Antarctica, but to date there has been little substantive evidence in support of this hypothesis. Using water traps we investigated aerial deposition of arthropods on Lagoon Island, Ryder Bay, on the Antarctic Peninsula. Over a period of five weeks, trapping at three different altitudes, we captured a total of nine springtails, Cryptopygus antarcticus, all alive. This is the first study to demonstrate conclusively the survival of wind-borne native arthropods within Antarctica. By scaling the modest trapping area and success against island surface area, it is clear that hundreds, if not thousands, of springtails are regularly relocated by winds between the terrestrial habitats of Marguerite Bay. We use known desiccation rates of C. antarcticus and wind speeds to predict the likelihood of successful dispersal between the principal terrestrial habitats of the larger Marguerite Bay. Implications for local and long-range dispersal are discussed in relation to C. antarcticus and other polar arthropods.

Both bacterial culture and molecular approaches were used to investigate the bacterial diversity inside the Chinese Antarctic Great Wall Station and in its adjacent area. Heterotrophic bacteria were isolated from the samples using a direct plating method. γ-Proteobacteria, Actinobacteria, Flavobacteria and Firmicutes were isolated from these samples. In the three water samples, Pseudomonas species were dominant. In soil samples, Flavobacterium, Bacillus or Arthrobacter species dominated. Escherichia coli strains were isolated only in two samples from inside the station. Total cell counts in the six soil samples were semi-quantified by Quantitative Competitive-PCR of the 16S rRNA gene copies. The soil samples contained 105 to 109 cells g−1. Denaturing gradient gel electrophoresis (DGGE) was used further to investigate the bacterial diversity in the soil samples. A wider range of bacterial diversity including α-Proteobacteria, β-Proteobacteria, δ-Proteobacteria, γ-Proteobacteria, Flavobacteria, Actinobacteria and unclassified bacteria was discovered.

Site fidelity is believed to be an important life history strategy for Weddell seals (Leptonychotes weddellii), that return to traditional breeding colonies each spring. We examined four hypotheses concerning their fidelity to these colonies: 1) fidelity is stronger to natal sites (natal fidelity) than to other sites, 2) females exhibit greater site fidelity than males, 3) site fidelity for both sexes increases with age, 4) site fidelity in adult females is related to their reproductive status and their total number of offspring. Analysis of a long-term tagging database from McMurdo Sound did not support hypotheses 1 and 2. Although animals did express fidelity to specific sites over their lifetime (χ2 tests, P < 0.05), fidelity to natal colonies was lower than to other sites (χ2 test, P < 0.05). There were no differences in site fidelity between males and females (χ2 tests, P > 0.05). Hypothesis 3 was supported. Since the probability of a returning seal occupying the same colony as the previous year increased with age among both sexes to about age 12. Finally, in support of hypothesis 4, females with a higher degree of site fidelity were more likely to both have a higher reproductive rate and return to a site where they have previously given birth.

The Southern Hemisphere contains many monotypic taxa, for which phylogenetic relationships are important to illuminate biogeographical history. The monotypic genus Lyallia is endemic to the sub-Antarctic Iles Kerguelen. A close relationship with another monotypic taxon, the New Zealand endemic Hectorella, was proposed. They share a dense cushion growth habit with small coriaceous leaves that lack stipules. The solitary flowers are bicarpellate with two sepals, 4–5 petals, 3–5 stamens and a bifid style. The fruit is an indehiscent capsule with 1–5 seeds. The flowers of Lyallia kerguelensis are hermaphroditic with four petals and three stamens whereas the flowers of Hectorella caespitosa are female, male or hermaphroditic, with five petals and five stamens. Lyallia kerguelensis is rare on Kerguelen, whereas Hectorella caespitosa is confined to the South Island of New Zealand. Our phylogenetic analysis of trnK/matK intergenic spacer and rbcL sequences provides evidence supporting a close relationship between Lyallia and Hectorella. The two species form a well-supported clade that is nested within the Portulacaceae. Divergence estimates suggest they shared a common ancestor during the late Tertiary long after the fragmentation of Gondwana. Such relationships underscore the importance of transoceanic dispersal and extinctions for plant evolution in the Southern Hemisphere.

A recent review by Ainley et al. has suggested that recent investigations of the ecological structure and processes of the Southern Ocean have “almost exclusively taken a bottom-up, forcing-by-physical-processes approach relating individual species' population trends to climate change”. We examine this suggestion and conclude that, in fact, there has been considerable research effort into ecosystem interactions over the last 25 years, particularly through research associated with management of the living resources of the Southern Ocean. Future Southern Ocean research will make progress only when integrated studies are planned around well structured hypotheses that incorporate both the physical and biological drivers of ecosystem processes.

The community of encrusting and boring organisms developed on shells of the gastropod Antarctodarwinella ellioti from the lower section of the La Meseta Formation (Eocene) exposed on Seymour (Marambio) Island, Antarctic Peninsula, allows inference that the shells were inhabited by hermit crabs. A Chi-square Independence Test revealed that the community - dominated by polychaetes and bryozoans - shows preference for the aperture interior area of the shell. A subsequent Cochran Q Test indicated that the differences in frequency of encrusting and boring organisms as counted on the different interior sectors of the aperture were statistically significant. Thus, polychaetes, boring bryozoans, and encrusting bryozoans, do not show the same frequency in each interior sector of the aperture; they are more frequent on the columella (P < 0.0001, P < 0.01 and P < 0.001 respectively). Encrusting bryozoans also appear to show a preference - albeit not as high as on the columella - for the outer lip. This community of boring and encrusting organisms and their distribution on the shell confirms that the shells were inhabited by hermit crabs. The community is similar to that described in Recent hermitted shells from mid-latitude temperate water environments, suggesting that such communities were already established in the Eocene.

Altitudinal gradients provide excellent opportunities to study relationships between species distribution and climatic variables. We studied the species composition of 39 samples of moss-inhabiting diatoms, collected at 50 m intervals from 100–650 m above sea level. The samples contained a total of 130 diatom species, of which 51 occurred in 10 or more samples. Altitude appeared to be the most important variable explaining variation in species composition. Of the 51 common species, 33 showed a significant relationship with altitude. Although the majority of the latter declined with increasing altitude, for nine species the probability of occurrence first increased with increasing elevation, but decreased again at higher altitudes, and four species increased systematically with elevation. As a result, expected species richness per sample decreased from an estimated 43 at 100 m to 25 species per sample at 650 m. Diatom distribution patterns proved to be suitable predictors of the altitudinal position of sample sites. Cross-validation yielded a strong relationship between predicted and observed altitudes.

New evidence regarding the origins of the Crustacea of Antarctic lakes is reviewed. Palaeolimnological data indicates that the cladoceran Daphniopsis studeri has been present in Lake Reid, Larsemann Hills, for over 120 000 yr. This is the first direct evidence of a continental lacustrine refugium during the last glacial maximum. There are strong indications that the calanoid copepod Boeckella poppei maintained populations over the same period in lakes of the Amery Oasis, and the rapid post-glacial colonization by this species of newly formed lakes on the Antarctic Peninsula and Signy Island argues for a local rather than an extra-continental source. Evidence for the entry of marine-derived species into the longer term fauna of the continent is also presented. It is concluded that many of the Crustacea in Antarctic lakes are likely to have had a long association with the continent.

Equations were developed to predict soil matric potential as a function of soil water content, texture and bulk density in sandy soils. The equations were based on the additivity hypothesis - that water-retention of a whole soil depends on the proportions of several particle size fractions, each with fixed water-retention characteristics. The new model is an advancement over previously published models in that it embodies three basic properties of water-retention curves: a) matric potential is zero at saturation water content, b) matric potential approaches -∞ as water content approaches zero, and c) volumetric water content in dry soil is proportional to bulk density. Values of model parameters were taken from the literature, or estimated by fitting model predictions to data for sandy soils with low organic matter content. Most of the variation in water-release curves in the calibration data was explained by texture, with negligible effects of bulk density and sand particle size. The model predicted that variation in clay content among soils within the sand and loamy sand textural classes had substantial effects on water-retention curves. An understanding of how variation in texture among sandy soils contributes to matric potential is necessary for interpreting biological activity in arid environments.

The degree and nature of association between trace metals (Cu, Pb, Zn, Ni, Ag, & Cd) and cyanobacterial mats, phytoplankton and sediments has been assessed in the Lake Vanda region of the Wright Valley, Victoria Land. Trace metal:Fe ratios and SEM imaging confirmed that apparent trace metal enrichment in cyanobacterial mats, relative to the sediment beneath, was due to incorporation of fine (sub-micron) sediment particles in the muciligenous matrix of the mat. In suspended particulate material (SPM) filtered from the oxic water of Lake Vanda and the Onyx River, the degree of trace metal binding to the SPM did not appear to correlate with phytoplankton content. Instead a positive correlation was observed between Fe and trace metal content. The SPM at the top of the lake water column, where only the finest sediment remains suspended, had the highest trace metal concentrations. It is concluded that the trace metal content of cyanobacterial mats and phytoplankton samples is primarily due to incorporation of fine sediment particles of high surface area which therefore enhance trace metal adsorption capacity. This reinforces the existing hypothesis that trace metal solubility in this environment is primarily controlled by abiotic processes.

A partly new classification of shelf inhabiting Antarctic macro-zoobenthic communities is proposed in this review. The main components are two core communities. One is dominated by sessile suspension feeders supported by food entrained in strong near-bottom currents. Variants of this community include assemblages without sponges, those that prefer sponge spicule mats as substratum and predator-driven systems. The second core community is dominated by the infauna and mobile epifauna and controlled by vertical phytodetritus flux and soft sediments. This community is obviously restricted to areas with low current velocity, particularly in areas that are sheltered due to a heterogeneous coastal and sea floor topography. In addition, in physically controlled shallow water a small number of representatives of all these ecological guilds can become very abundant. Between both core communities a broad range of mixed assemblages exists that can be explained by a gradient in environmental conditions and trophic amensalism. A concept is also proposed for the ecological functioning of systems with extremely low abundances within ecological guilds, such as those that occur under and close to ice shelves, which cannot satisfactorily be explained by trophic limitation. These extremely low abundances may result from a shift during ontogenesis from a state with predominantly mismatched environmental conditions and ecological demands of young recruits, to a state where a match occurs.

Cryptosporidium is an intracellular parasite that belongs to the phylum Protozoa and subphylum Apicomplexa (Sporozoa). It was first described by from the digestive tract of laboratory mice (Garcia 2001), and has been found in several animal groups including fishes, reptiles, birds and mammals, including humans (Jellison et al. 2002).

Northern (Macronectes halli) and southern (M. giganteus) giant petrels breed at different times at sub-Antarctic Marion Island. Long-term census and breeding success data are used to test for competitive overlap between the two species by correlating population trends with those of land-based prey/carrion species. No parameter was singularly important in population regulation of either giant petrel species and the assumed dependence of breeding northern giant petrels on southern elephant seal Mirounga leonina carrion is not entirely supported.