This list contains references from the content that can be linked to their source. For a full set of references and notes please see the PDF or HTML where available.
 M. Acar , J. T. Mettetal and A. van Oudenaarden , Stochastic switching as a survival strategy in fluctuating environments, Nat. Genet., 40 (2008), 471–475.
 D. Adalsteinsson , D. McMillen and T. C. Elston , Biochemical network stochastic simulator (BioNetS): software for stochastic modeling of biochemical networks, BMC Bioinfo., 5 (2004), 24.
 B. J. Brewer , E. Chlebowicz-Sledziewska and W. L. Fangman , Cell cycle phases in the unequal mother/daughter cell cycles of Saccharomyces cerevisiae, Mol. Cell. Biol., 4 (1984), 2529–2531.
 D. Cohen , Optimizing reproduction in a randomly varying environment, J. Theor. Biol., 12 (1966), 119–129.
 D. L. Eager , J. Zahorjan and E. D. Lazowska , Speedup versus efficiency in parallel systems, IEEE Trans. Comput., 38 (1989), 408–423.
 D. Fraser and M. Kaern , A chance at survival: gene expression noise and phenotypic diversification strategies, Molec. Microbiol., 71 (2009), 1333–1340.
 D. T. Gillespie , A general method for numerically simulating the stochastic time evolution of coupled chemical reactions, J. Comput. Phys., 22 (1976), 403–434.
 D. T. Gillespie , Exact stochastic simulation of coupled chemical reactions, J. Phys. Chem., 81 (1977), 2340–2361.
 D. T. Gillespie , Stochastic simulation of chemical kinetics, Annu. Rev. Phys . Chem., 58 (2007), 35–55.
 D. T. Gillespie , Approximate accelerated stochastic simulation of chemically reacting systems, J. Chem. Phys., 115 (2001), 1716–1733.
 M. Kaern , T. C. Elston , W. J. Blake and J. J. Collins , Stochasticity in gene expression, Nat. Rev. Genet., 6 (2005), 451–464.
 B. B. Kaufmann and A. van Oudenaarden , Stochastic gene expression: from single molecules to the proteome, Curr. Opin. Genet. Dev., 17 (2007), 107–112.
 T. B. Kepler and T. C. Elston , Stochasticity in transcriptional regulation, Biophys. J., 81 (2001), 3116–3136.
 A. M. Kierzek , Stocks: Stochastic kinetic simulations of biochemical systems with Gillespie algorithm, Bioinf., 18 (2002), 470–481.
 M. Kostoglou and A. J. Karabelas , Evaluation of zero-order methods for simulation particle coagulation, J. Colloid. Interface. Sci., 163 (1994), 420–431.
 K. Lee and T. Matsoukas , Simultaneous coagulation and break-up using constant-N Monte Carlo, Powder. Technol., 110 (2000), 82–89.
 Y. Lin , K. Lee and T. Matsoukas , Solution of the population balance equation using constant-number Monte Carlo, Chem. Eng. Sci., 57 (2002), 2241–2252.
 T. Lu , D. Volfson , L. Tsimring and J. Hasty , Cellular growth and division in the Gillespie algorithm, Syst. Biol., 1 (2004), 121–128.
 N. Maheshri and E. K. O’Shea , Living with noisy genes: how cells function reliably with inherent variability in gene expression, Annu. Rev. Biophys. Biomol. Struct., 36 (2007), 413–434.
 N. V. Mantzaris , Stochastic and deterministic simulations of heterogeneous cell population dynamics, J. Theor. Biol., 241 (2006), 690–706.
 N. V. Mantzaris , From single-cell genetic architecture to cell population dynamics: quantitatively decomposing the effects of different population heterogeneity sources for a genetic network with positive feedback architecture, Biophys. J., 92 (2007), 4271–4288.
 J. Paulsson , Summing up the noise in gene networks, Nature, 427 (2004), 415–418.
 A. S Ribeiro , D. A Charlebois and J. Lloyd-Price , Cellline, a stochastic cell lineage simulator, Bioinf., 23 (2007), 3409–3411.
 M. Roussel and R. Zhu , Validation of an algorithm for delay stochastic simulation of transcription and translation in prokaryotic gene expression, Phys. Biol., 3 (2006), 274–284.
 N. Rosenfeld , T. J. Perkins , U. Alon , M. B. Elowitz and P. S. Swain , A fluctuation method to quantify in vivo fluorescence data, Biophys. J., 91 (2006), 759–766.
 W. M. Schaffer , Optimal efforts in fluctuating environments, Am. Nat., 108 (1974), 783–790.
 V. Shahrezaei and P. S. Swain , Analytical distributions for stochastic gene expression, PNAS, 105 (2008), 17256–17261.
 M. Smith and T. Matsoukas , Constant-number Monte Carlo simulation of population balances, Chem. Eng. Sci., 53 (1998), 1777–1786.
 S. C. Stearns , Life-history tactics: a review of the ideas, Q. Rev. Biol., 51 (1976), 3–47.
 P. S. Swain , M. B. Elowitz and E. D. Siggia , Intrinsic and extrinsic contributions to stochas-ticity in gene expression, PNAS, 99 (2002), 12795–12800.
 J. J. Tyson and O. J. Diekmann , Sloppy size control of the cell division cycle, Theor. Biol., 118 (1986), 405–426.