1.Kotloff, KL, et al. Global burden of Shigella infections: implications for vaccine development and implementation of control strategies. Bulletin of the World Health Organization 1999; 77: 651–666.
2.Bentley, CA, et al. Phage typing and drug resistance of Shigella sonnei isolated in England and Wales. Epidemiology and Infection 1996: 116: 295–302.
3.McCann, R, et al. An outbreak of Shigella sonnei dysentery among a religious community in Salford and Bury. Health Protection Agency North West Office, Health Protection Bulletin 2004, pp. 3–5.
4.Working Group of the former PHLS Advisory Committee on Gastrointestinal Infections. Preventing person-to-person spread following gastrointestinal infections: guidelines for public health physicians and environmental health officers, 2004.
5.Liang, SY, et al. Multilocus variable-number tandem-repeat analysis for molecular typing of Shigella sonnei. Journal of Clinical Microbiology 2007; 45: 3574–3580.
6.Frost, JA, et al. An outbreak of Shigella sonnei infection associated with consumption of iceberg lettuce. Emergering Infectious Diseases 1995; 1: 26–29.
7.Harris, SR, et al. Evolution of MRSA during hospital transmission and intercontinental spread. Science 2010; 327: 469–474.
8.Quail, MA, et al. A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers. BMC Genomics 2012; 13: 341.
9.Yang, F, et al. Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery. Nucleic Acids Research 2005; 33: 6445–6458.
10.Langmead, B, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biology 2009; 10: R25.
11.Li, H, et al. The Sequence Alignment/Map format and SAMtools. Bioinformatics 2009; 25: 2078–2079.
12.Milne, I, et al. Tablet – next generation sequence assembly visualization. Bioinformatics 2010; 26: 401–402.
13.Price, MN, et al. FastTree 2 – approximately maximum-likelihood trees for large alignments. PLoS One 2010; 5: 9490.
14.Addiman, S, et al. Is history repeating itself? Shigella sonnei PT P outbreak in the Orthodox Jewish community in Hackney, London. Health Protection Conference, 15–17 September 2008; Warwick, UK. Poster presentation.
15.Sobel, J, et al. A prolonged outbreak of Shigella sonnei infections in traditionally observant Jewish communities in North America caused by a molecularly distinct bacterial subtype. Journal of Infectious Diseases 1998; 177: 1405–1409.
16.De, SK, et al. Outbreak of Shigella sonnei infections in the Orthodox Jewish community of Antwerp, Belgium, April to August 2008. European Surveillance 2011; 16: 19838.
17.Chiou, CS, et al. Utility of multilocus variable-number tandem-repeat analysis as a molecular tool for phylogenetic analysis of Shigella sonnei. Journal of Clinical Microbiology 2009; 47: 1149–1154.
18.Holt, KE, et al. Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe. Nature Genetics 2012; 44: 1056–1059.
19.Garrett, V, et al. A recurring outbreak of Shigella sonnei among traditionally observant Jewish children in New York City: the risks of daycare and household transmission. Epidemiology and Infection 2006; 134: 1231–1236.