Dempster, A. P., Laird, N. M. & Rubin, D. B. (1977). Maximum likelihood from incomplete data via the EM algorithm. Journal of the Royal Statistical Society Series B 39, 1–38.
Grattapaglia, D. & Sederoff, R. (1994). Genetic linkage maps of Eucalyptus grandis and Eucalyptus urophylla using a pseudo-testcross: mapping strategy and RAPD markers. Genetics 137, 1121–1137.
Jansen, J., De Jong, A. G. & Van Ooijen, J. W. (2001). Constructing dense genetic linkage maps. Theoretical and Applied Genetics 102, 1113–1122.
Jansen, J. (2005). Construction of linkage maps in full-sib families of diploid outbreeding species by minimizing the number of recombinations in hidden inheritance vectors. Genetics 170, 2013–2025.
Kirkpatrick, S., Gelatt, C. D. Jr & Vecchi, M. P. (1983). Optimization by simulated annealing. Science 220, 671–680.
Lander, E. S. & Green, P. (1987). Construction of multilocus genetic linkage maps in humans. Proceedings of the National Academy of Sciences USA 84, 2363–2367.
Maliepaard, C., Jansen, J. & Van Ooijen, J. W. (1997). Linkage analysis in a full-sib family of an outbreeding plant species: overview and consequences for applications. Genetical Research 70, 237–250.
Ridout, M. S., Tong, S., Vowden, C. J. & Tobutt, K. R. (1998). Three-point linkage analysis in crosses of allogamous plant species. Genetical Research 72, 111–121.
Ritter, E., Gebhardt, C. & Salamini, F. (1990). Estimation of recombination frequencies and construction of RFLP linkage maps in plants from crosses between heterozygous parents. Genetics 125, 645–654.
Ritter, E. & Salamini, F. (1996). The calculation of recombination frequencies in crosses of allogamous plant species with applications to linkage mapping. Genetical Research 67, 55–65.
Van Ooijen, J. W. (2006). JoinMap® 4, Software for the Calculation of Genetic Linkage Maps in Experimental Populations. Wageningen, the Netherlands: Kyazma B.V.
Wu, R. L., Ma, C. X., Painter, I. & Zeng, Z.-B. (2002 a). Simultaneous maximum likelihood estimation of linkage and linkage phases in outcrossing species. Theoretical Population Biology 61, 349–363.
Wu, R., Ma, C.-X., Wu, S. S. & Zeng, Z.-B. (2002 b). Linkage mapping of sex-specific differences. Genetical Research 79, 85–96.