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Evolution, domestication and neo-domestication of the genus Vigna

Published online by Cambridge University Press:  16 July 2014

Norihiko Tomooka*
Affiliation:
National Institute of Agrobiological Sciences (NIAS), Tsukuba, Ibaraki, Japan
Ken Naito
Affiliation:
National Institute of Agrobiological Sciences (NIAS), Tsukuba, Ibaraki, Japan
Akito Kaga
Affiliation:
National Institute of Agrobiological Sciences (NIAS), Tsukuba, Ibaraki, Japan
Hiroaki Sakai
Affiliation:
National Institute of Agrobiological Sciences (NIAS), Tsukuba, Ibaraki, Japan
Takehisa Isemura
Affiliation:
National Institute of Agrobiological Sciences (NIAS), Tsukuba, Ibaraki, Japan
Eri Ogiso-Tanaka
Affiliation:
National Institute of Agrobiological Sciences (NIAS), Tsukuba, Ibaraki, Japan
Kohtaro Iseki
Affiliation:
National Institute of Agrobiological Sciences (NIAS), Tsukuba, Ibaraki, Japan
Yu Takahashi
Affiliation:
National Institute of Agrobiological Sciences (NIAS), Tsukuba, Ibaraki, Japan
*
* Corresponding author. E-mail: tomooka@affrc.go.jp

Abstract

In this paper, we discuss stress-adapted wild Vigna plants and several important Vigna crops. Seeds, young shoots and/or tubers of many wild Vigna species are edible and are eaten by people in some locations where they grow. We propose the concept of ‘neo-domestication’ of stress-adapted wild edible Vigna species. As the causative change of the mutation resulting in a domestication gene is usually ‘loss-of-function’ type, ‘neo-domestication’ could be achieved by conventional mutation breeding together with screening by TILLING. The ‘neo-crops’ could play an important role in areas unsuitable for growing other crops to increase world food production. We also propose that wild Vigna species can be ‘new model plant species’ for the genetic study of natural adaptation to stresses (e.g. salt, acid, alkali, drought, flood, pests and diseases). To facilitate this, the Vigna Genome Project has been initiated. In addition, sustainable cropping systems may be enhanced by analysis of the nitrogen-fixing systems of stress-adapted Vigna species. Stress-adapted symbiotic bacteria produce nodules on stress-adapted Vigna species. Therefore, analyses of the genetic diversity of symbiotic bacteria and the process of symbiosis under stress environments should be conducted.

Type
Research Article
Copyright
Copyright © NIAB 2014 

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References

Akatsu, T, Sano, N, Kanekatsu, M, Ishikawa, H, Ohkama-Ohtsu, N, Tomooka, N and Yokoyama, T (2012) Analysis of salinity tolerance mechanisms of root nodule bacteria associated with Vigna marina in coral beach soils, Ishigaki and Iriomote. Abstract of the 22nd annual meeting for plant-microbe interactions Vol.22, pp. 71–72. ISSN 1341-0652..Google Scholar
Chaitieng, B, Kaga, A, Tomooka, N, Isemura, T, Kuroda, Y and Vaughan, DA (2006) Development of a black gram [Vigna mungo (L.) Hepper] linkage map and its comparison with an azuki bean [Vigna angularis (Willd.) Ohwi and Ohashi] linkage map. Theoretical and Applied Genetics 113: 12611269.CrossRefGoogle Scholar
Chankaew, S, Isemura, T, Naito, K, Ogiso-Tanaka, E, Tomooka, N, Somta, P, Kaga, A, Vaughan, DA and Srinives, P (2014) mapping for salt tolerance and domestication-related traits in Vigna marina subsp. oblonga; a halophytic species. Theoretical and Applied Genetics 127: 691702.CrossRefGoogle ScholarPubMed
Doebley, JF, Gaut, BS and Smith, BD (2006) The molecular genetics of crop domestication. Cell 127: 13091321.CrossRefGoogle ScholarPubMed
FAO(2013) Hunger Report. Available at http://www.fao.org/hunger/en/.Google Scholar
Isemura, T, Kaga, A, Konishi, S, Ando, T, Tomooka, N, Han, OK and Vaughan, DA (2007) Genome dissection of traits related to domestication in azuki bean (Vigna angularis) and comparison with other warm season legumes. Annals of Botany 100: 10531071.CrossRefGoogle ScholarPubMed
Isemura, T, Kaga, A, Tomooka, N, Shimizu, T and Vaughan, DA (2010) The genetics of domestication of rice bean (Vigna umbellata). Annals of Botany 106: 927944.CrossRefGoogle ScholarPubMed
Isemura, T, Kaga, A, Tabata, S, Somta, P, Srinives, P, Shimizu, T, Jo, U, Vaughan, DA and Tomooka, N (2012) Construction of a genetic linkage map and genetic analysis of domestication related traits in mungbean (Vigna radiata). PLoS One 7: e41304.CrossRefGoogle ScholarPubMed
Kaga, A, Isemura, T, Tomooka, N and Vaughan, DA (2008) The genetics of domestication of the azuki bean (Vigna angularis). Genetics 178: 10131036.CrossRefGoogle ScholarPubMed
Kongjaimun, A, Kaga, A, Tomooka, N, Somta, P, Vaughan, DA and Srinives, P (2012a) The genetics of domestication of yardlong bean, Vigna unguiculata (L.) Walp. ssp. unguiculata cv.-gr. sesquipedalis. . Annals of Botany 109: 11851200.CrossRefGoogle Scholar
Kongjaimun, A, Somta, P, Tomooka, N, Kaga, A, Vaughan, DA and Srinives, P (2012b) QTL mapping of pod tenderness and total soluble solid in yardlong bean [Vigna unguiculata (L.) Walp. subsp.unguiculata cv.-gr. sesquipedalis]. Euphytica 189: 217223.CrossRefGoogle Scholar
Maxted, N, Mabuza-Dlamini, P, Moss, H, Padulosi, S, Jarvis, A and Guarino, L (2004) African Vigna: An ecog eographic study. Rome: IPGRI.Google Scholar
Naito, K, Kaga, A, Tomooka, N and Kawase, M (2013) De novo assembly of the complete organelle genome sequences of azuki bean (Vigna angularis) using next-generation sequencers. Breed Sci 63: 176182.CrossRefGoogle ScholarPubMed
Sakai, H, Naito, K, Ogiso-Tanaka, E, Kaga, A, Itoh, T and Tomooka, N (2013) The Vigna genome project. Abstract for Plant Genomes & Biotechnology: From Genes to Networks. December 2013, Cold Spring Harbor Laboratory..Google Scholar
Tilman, D, Cassman, K, Matson, P, Naylor, R and Polasky, S (2002) Agricultural sustainability and intensive production practices. Nature 418: 671677.CrossRefGoogle ScholarPubMed
Tomooka, N, Vaughan, DA, Maxted, H and Moss, H (2002) The Asian Vigna: Genus Vigna Subgenus Ceratotropis Genetic Resources. Dordrecht: Kluwer Academic Press.CrossRefGoogle Scholar
Tomooka, N, Kaga, A, Isemura, T and Vaughan, DA (2011) Vigna. In: Chittaranjan, Kole (ed.) Wild Crop Relatives: Genomic and Breeding Resources Legume Crops and Forages. NY: Springer, pp. 291311.CrossRefGoogle Scholar
Udvardi, MK and Scheible, WR (2005) GRAS genes and the symbiotic green revolution. Science 308: 17491750.CrossRefGoogle ScholarPubMed
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