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Recurrent and chaotic outbreaks in SIR model

Published online by Cambridge University Press:  18 January 2024

Chunyi Gai
Affiliation:
Department of Mathematics, University of British Columbia, Vancouver, Canada
Theodore Kolokolnikov*
Affiliation:
Department of Mathematics and Statistics, Dalhousie University Halifax, Nova Scotia, Canada
Jan Schrader
Affiliation:
Department of Mathematics and Statistics, Dalhousie University Halifax, Nova Scotia, Canada
Vedant Sharma
Affiliation:
Indian Institute of Science, Bangalore, India
*
Corresponding author: Theodore Kolokolnikov; tkolokol@gmail.com
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Abstract

We examine several extensions to the basic Susceptible-Infected-Recovered model, which are able to induce recurrent outbreaks (the basic Susceptible-Infected-Recovered model by itself does not exhibit recurrent outbreaks). We first analyse how slow seasonal variations can destabilise the endemic equilibrium, leading to recurrent outbreaks. In the limit of slow immunity loss, we derive asymptotic thresholds that characterise this transition. In the outbreak regime, we use asymptotic matching to obtain a two-dimensional discrete map which describes outbreak times and strength. We then analyse the resulting map using linear stability and numerics. As the frequency of forcing is increased, the map exhibits a period-doubling route to chaos which alternates with periodic outbreaks of increasing frequency. Other extensions that can lead to recurrent outbreaks include the addition of noise, state-dependent variation and fine-graining of model classes.

MSC classification

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Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
© The Author(s), 2024. Published by Cambridge University Press
Figure 0

Figure 1. Simulations of (2.1) with $\beta (t)=\beta _{0}+a\cos (\omega \varepsilon t)$ for several values of $a$ as shown. Other parameters are $\beta _{0}=1,\omega =2\pi,$$\gamma =0.5,\ \varepsilon =0.001.$ Initial conditions were taken to be $I(0)=0.01,$$S(0)=0.99.$ Row 1: constant $\beta$, damped oscillations towards steady state are observed. Row 2: Convergence towards an adiabatic state. Row 3: Convergence towards adiabatic equilibrium with damped oscillations. Row 4: Onset of small periodic oscillations. Row 5: Large periodic outbreaks. $J_{0}$ is defined in (2.7).

Figure 1

Figure 2. Comparison of asymptotic prediction for the outbreak boundary and full numerics. (a) Periodic $\beta (t).$ Dashed curve shows the threshold boundary in the $a-\omega$ parameter space given by (2.9), with $\beta =1+a\cos (\omega \varepsilon t),\gamma =0.5.$ Orange and blue regions correspond to outbreak (unstable) and endemic (stable) regions, respectively, as computed using the full numerical simulations of the full model (1.1) with $\varepsilon =0.001.$ See text for details. (b) Periodic $\gamma (t)$. Dashed curve shows the threshold boundary as given by (2.11) with $\beta =1,\ \ \gamma =0.5+a\cos (\omega \varepsilon t) .$Full numerics are as in part (a), computed with $\varepsilon =0.001$.

Figure 2

Figure 3. Inner-outer structure of the recurrent outbreaks solution and definition of various quantities that define the discrete return map.

Figure 3

Figure 4. Comparison between the full ODE (2.1) simulation (left) and the discrete return map (right). The ode (2.1) was solved with $\beta (t)=1+a\cos (4\pi \varepsilon ),$$\gamma =0.5,\ \varepsilon =0.001.$ The parameter $a$ was gradually ramped up using the formula $a=0.1+10^{-7}t$ with $t=0\ldots 10^{6}.$ Forward Euler method was used with timestep $dt=0.1$ Maxima of $S(t)$ as plotted versus $a$. Right: Iterations of the return map (3.1) (3.7) and (3.8). Here, 4000 iterations are plotted, while gradually increasing $a$ according to the formula $a_{i}=0.1+0.1\frac{i}{i_{\max }}$; here, $i$ is the iteration number and $i_{\max }=4000.$.

Figure 4

Figure 5. (a) Transitions between $k=1$ periodic solution ($\omega =3$) and $k=2$ solution $(\omega =4)$. Parameters are $\beta _{0}=1,\ a=0.5,\ \gamma =0.7,\ \varepsilon =0.001$, and $\omega$ as indicated$.$ (b) Plot of the shift $s$ versus $\omega .$ Other parameters are $\beta _{0}=1,\ a=0.5,\ \gamma =0.7$. Red dots denote the locations of the fold points. (c) Bifurcation diagram of the discrete return map, as $\omega$ is slowly ramped up. Dashed curves overlay the location of the fixed points corresponding to $k=1\ldots 4$ from (b) The stable branch is between the red point $\omega _{f}$ and the cyan point $\omega _{c}.$ The solutions in (a) correspond to the values of $\omega$ denoted by vertical lines in (c).

Figure 5

Figure 6. Effect of stochasticity on recurrent outbreaks. Simulation of (2.1) and (6.1) with $\beta _{0}=1,\gamma =0.5,$$a=0.001,\ b=0.01$ and with $\varepsilon$ as indicated. Same stochastic path for $\beta$ was used in all three simulations. Top: the endemic state $S$ ‘follows’ $\gamma/\beta$ without major outbreaks. Middle: decreasing $\varepsilon$ induces some outbreaks. Bottom: even smaller $\varepsilon$ results in recurrent outbreaks.

Figure 6

Figure 7. Periodic outbreaks for model (6.2) using parameters (6.3).

Figure 7

Figure 8. (a) Model (6.4) illustrating sustained persistent outbreaks with $n=2, (\beta _{s},\beta _{1},\beta _{2})=$$(1,1,0),\ \gamma =0.7,$$\mu _{1}=\mu _{2}=0.01.$ (b) Model (6.4) with $\gamma$ as indicated and other parameters as in (6.5). Note the period-doubling route to chaos.