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Effects of psychosis-associated genetic markers on brain volumetry: a systematic review of replicated findings and an independent validation

Published online by Cambridge University Press:  28 September 2022

Nuno Vouga Ribeiro
Affiliation:
Faculdade de Medicina, Universidade de Lisboa, Lisboa, Portugal Instituto de Biofísica e Engenharia Biomédica, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal
Vânia Tavares
Affiliation:
Faculdade de Medicina, Universidade de Lisboa, Lisboa, Portugal Instituto de Biofísica e Engenharia Biomédica, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal
Elvira Bramon
Affiliation:
Division of Psychiatry, University College London, London, UK Department of Psychosis Studies, Institute of Psychiatry, Psychology & Neuroscience, King’ College London, London, UK Institute of Cognitive Neuroscience, University College London, London, UK
Timothea Toulopoulou
Affiliation:
Department of Psychology & National Magnetic Resonance Research Center (UMRAM), Aysel Sabuncu Brain Research Centre (ASBAM), Bilkent University, Ankara, Turkey
Isabel Valli
Affiliation:
Department of Psychosis Studies, Institute of Psychiatry, Psychology & Neuroscience, King’ College London, London, UK Institut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), University of Barcelona, Barcelona, Spain
Sukhi Shergill
Affiliation:
Department of Psychosis Studies, Institute of Psychiatry, Psychology & Neuroscience, King’ College London, London, UK
Robin Murray
Affiliation:
Department of Psychosis Studies, Institute of Psychiatry, Psychology & Neuroscience, King’ College London, London, UK
Diana Prata*
Affiliation:
Instituto de Biofísica e Engenharia Biomédica, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal Department of Old Age Psychiatry, Institute of Psychiatry, Psychology & Neuroscience, King's College London, London, UK
*
Author for correspondence: Diana Prata, E-mail: diana.prata@kcl.ac.uk
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Abstract

Background

Given psychotic illnesses' high heritability and associations with brain structure, numerous neuroimaging-genetics findings have been reported in the last two decades. However, few findings have been replicated. In the present independent sample we aimed to replicate any psychosis-implicated SNPs (single nucleotide polymorphisms), which had previously shown at least two main effects on brain volume.

Methods

A systematic review for SNPs showing a replicated effect on brain volume yielded 25 studies implicating seven SNPs in five genes. Their effect was then tested in 113 subjects with either schizophrenia, bipolar disorder, ‘at risk mental state’ or healthy state, for whole-brain and region-of-interest (ROI) associations with grey and white matter volume changes, using voxel-based morphometry.

Results

We found FWER-corrected (Family-wise error rate) (i.e. statistically significant) associations of: (1) CACNA1C-rs769087-A with larger bilateral hippocampus and thalamus white matter, across the whole brain; and (2) CACNA1C-rs769087-A with larger superior frontal gyrus, as ROI. Higher replication concordance with existing literature was found, in decreasing order, for: (1) CACNA1C-rs769087-A, with larger dorsolateral-prefrontal/superior frontal gyrus and hippocampi (both with anatomical and directional concordance); (2) ZNF804A-rs11681373-A, with smaller angular gyrus grey matter and rectus gyri white matter (both with anatomical and directional concordance); and (3) BDNF-rs6265-T with superior frontal and middle cingulate gyri volume change (with anatomical and allelic concordance).

Conclusions

Most literature findings were not herein replicated. Nevertheless, high degree/likelihood of replication was found for two genome-wide association studies- and one candidate-implicated SNPs, supporting their involvement in psychosis and brain structure.

Information

Type
Review Article
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
Copyright © The Author(s), 2022. Published by Cambridge University Press
Figure 0

Fig. 1. PRISMA flow diagram for systematic review studies selection.

Figure 1

Table 1. BDNF and CACNA1C: primary studies of its SNPs of interest and their corresponding effects on brain volume; in comparison with the present study's findings

Figure 2

Table 2. ZNF804A: primary studies of its SNPs of interest and their corresponding effects on brain volume; in comparison with the present study's findings

Figure 3

Table 3. Most approximate replication concordance, of main effects of SNP genotypes on grey or white matter volume, between our study and primary studies findings from the systematic review performed

Figure 4

Fig. 2. Positive effect of A-carriers v.vs. G homozygotes for CACNA1C rs769087 on left and right dorsolateral prefrontal cortex grey matter at voxel of peak effect (from region-of-interest analysis; at p < 0.05 after FWER correction). The image shows a cluster at p < 0.001 uncorrected, with blue cross-hair lines pointing to the voxel of peak effect.

Figure 5

Fig. 3. Above: Positive effect of AA v.vs. AG and AA v.vs. GG genotypes for CACNA1C rs769087 on left hippocampus white matter. Below: Positive effect of AA v.vs. AG and AA v.vs. GG genotypes for CACNA1C rs769087 on left and right thalamus white matter (in image), and right hippocampus white matter (not in image). Both images as whole-brain analyses, showing clusters at p < 0.001 uncorrected, and blue cross-hair lines pointing to the voxel of peak effect (at p < 0.05 after FWER correction).

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