Hostname: page-component-89b8bd64d-b5k59 Total loading time: 0 Render date: 2026-05-07T18:24:39.147Z Has data issue: false hasContentIssue false

The East Jakarta Project: surveillance for highly pathogenic avian influenza A(H5N1) and seasonal influenza viruses in patients seeking care for respiratory disease, Jakarta, Indonesia, October 2011–September 2012

Published online by Cambridge University Press:  27 April 2015

A. D. STORMS
Affiliation:
Influenza Division. U.S. Centers for Disease Control and Prevention, Atlanta, GA, USA Epidemic Intelligence Service. Centers for Disease Control and Prevention, Atlanta, GA, USA
R. KUSRIASTUTI
Affiliation:
Ministry of Health Republic of Indonesia, Jakarta, Indonesia
S. MISRIYAH
Affiliation:
Ministry of Health Republic of Indonesia, Jakarta, Indonesia
C. Y. PRAPTININGSIH
Affiliation:
Influenza Division. U.S. Centers for Disease Control and Prevention, Jakarta, Indonesia
M. AMALYA
Affiliation:
Influenza Division. U.S. Centers for Disease Control and Prevention, Jakarta, Indonesia
K. E. LAFOND
Affiliation:
Influenza Division. U.S. Centers for Disease Control and Prevention, Atlanta, GA, USA
G. SAMAAN
Affiliation:
Influenza Division. U.S. Centers for Disease Control and Prevention, Jakarta, Indonesia
R. TRIADA
Affiliation:
Ministry of Health Republic of Indonesia, Jakarta, Indonesia
A. D. IULIANO
Affiliation:
Influenza Division. U.S. Centers for Disease Control and Prevention, Atlanta, GA, USA
M. ESTER
Affiliation:
Influenza Division. U.S. Centers for Disease Control and Prevention, Jakarta, Indonesia
R. SIDJABAT
Affiliation:
Ministry of Health Republic of Indonesia, Jakarta, Indonesia
K. CHITTENDEN
Affiliation:
United States Agency for International Development, Jakarta, Indonesia
R. VOGEL
Affiliation:
USAID/DELIVER PROJECT, John Snow, International, Jakarta Field Office, Jakarta, Indonesia
M. A. WIDDOWSON
Affiliation:
Influenza Division. U.S. Centers for Disease Control and Prevention, Atlanta, GA, USA
F. MAHONEY
Affiliation:
Influenza Division. U.S. Centers for Disease Control and Prevention, Atlanta, GA, USA
T. M. UYEKI*
Affiliation:
Influenza Division. U.S. Centers for Disease Control and Prevention, Atlanta, GA, USA
*
* Author for correspondence: T. M. Uyeki, MD, MPH, MPP,Influenza Division, Centers for Disease Control and Prevention,1600 Clifton Rd., NE, MS A-20, Atlanta, GA 30333, USA. (Email: tuyeki@cdc.gov)
Rights & Permissions [Opens in a new window]

Summary

Indonesia has reported the most human infections with highly pathogenic avian influenza (HPAI) A(H5N1) virus worldwide. We implemented enhanced surveillance in four outpatient clinics and six hospitals for HPAI H5N1 and seasonal influenza viruses in East Jakarta district to assess the public health impact of influenza in Indonesia. Epidemiological and clinical data were collected from outpatients with influenza-like illness (ILI) and hospitalized patients with severe acute respiratory infection (SARI); respiratory specimens were obtained for influenza testing by real-time reverse transcription–polymerase chain reaction. During October 2011–September 2012, 1131/3278 specimens from ILI cases (34·5%) and 276/1787 specimens from SARI cases (15·4%) tested positive for seasonal influenza viruses. The prevalence of influenza virus infections was highest during December–May and the proportion testing positive was 76% for ILI and 36% for SARI during their respective weeks of peak activity. No HPAI H5N1 virus infections were identified, including hundreds of ILI and SARI patients with recent poultry exposures, whereas seasonal influenza was an important contributor to acute respiratory disease in East Jakarta. Overall, 668 (47%) of influenza viruses were influenza B, 384 (27%) were A(H1N1)pdm09, and 359 (25%) were H3. While additional data over multiple years are needed, our findings suggest that seasonal influenza prevention efforts, including influenza vaccination, should target the months preceding the rainy season.

Information

Type
Original Papers
Copyright
Copyright © Cambridge University Press 2015 
Figure 0

Table 1. Distribution of ILI and SARI cases by age group, sex, and district of residence. East Jakarta District, Jakarta, Indonesia, October 2011–September 2012

Figure 1

Table 2. Comorbidities and clinical characteristics of influenza-positive and influenza-negative hospitalized SARI cases. East Jakarta District, Jakarta, Indonesia, October 2011–September 2012

Figure 2

Fig. 1. Percentage of influenza-positive influenza-like illness (ILI) and severe acute respiratory infection (SARI) cases by age group. East Jakarta District, Jakarta, Indonesia, October 2011–September 2012.

Figure 3

Fig. 2. (a) Influenza-positive influenza-like illness (ILI) cases by epidemiological week. Cases by date of illness onset. (b) Influenza-positive severe acute respiratory infection (SARI) cases by epidemiological week. Cases by date of illness onset. (c) Percentage of SARI cases out of total admissions and ILI cases out of total visits, by epidemiological week. Cases by date of presentation. East Jakarta District, Jakarta, Indonesia, October 2011–September 2012.

Figure 4

Fig. 3. Influenza-positive specimens from (a) influenza-like illness cases and (b) severe acute respiratory infection cases by type/subtype and rainfall by epidemiological week. Cases by date of presentation. East Jakarta District, Jakarta, Indonesia, October 2011–September 2012.

Figure 5

Table 3. Clinical outcomes of influenza-positive and influenza-negative hospitalized SARI cases. East Jakarta District, Jakarta, Indonesia, October 2011–September 2012

Figure 6

Table 4. History of poultry exposure in ILI and SARI cases in the 7 days prior to illness onset. East Jakarta District, Jakarta, Indonesia, October 2011–September 2012