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DNA topoisomerase 2 mutant allele mildly delays the mitotic progression and activates the checkpoint protein kinase Chk1 in fission yeast Schizosaccharomyces pombe

Published online by Cambridge University Press:  18 July 2011

SUDHANSHU YADAV
Affiliation:
Molecular and Structural Biology Division, Central Drug Research Institute, CSIR Chattar Manzil Palace, MG Road, Lucknow 226001, India
SUMIT KUMAR VERMA
Affiliation:
Molecular and Structural Biology Division, Central Drug Research Institute, CSIR Chattar Manzil Palace, MG Road, Lucknow 226001, India
SHAKIL AHMED*
Affiliation:
Molecular and Structural Biology Division, Central Drug Research Institute, CSIR Chattar Manzil Palace, MG Road, Lucknow 226001, India
*
*Corresponding author: Molecular and Structural Biology Division, Central Drug Research Institute, CSIR Chattar Manzil Palace, MG Road, Lucknow 226001, India. Tel: +91 522-2612411-18, ext 4367. Fax: +91-522-2623405. E-mail: shakil_ahmed@cdri.res.in, shakil7099@yahoo.com
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Summary

DNA topoisomerases are specialized nuclear enzymes that perform topological modifications on double-stranded DNA (dsDNA) and hence are essential for DNA metabolism such as replication, transcription, recombination, condensation and segregation. In a genetic screen, we identified a temperature-sensitive mutant allele of topoisomerase 2 that exhibits conditional synthetic lethality with a chk1 knockout strain. The mutant allele of topoisomerase 2 is defective in chromosome segregation at a non-permissive temperature and there was increase in chromosome segregation defects in the double mutant of top2–10 and chk1 delete at a non-permissive temperature. More importantly, topoisomearse 2 mutant cells mildly delay the mitotic progression at non-permissive temperature that is mediated by checkpoint protein kinase Chk1. Additionally, top2–10 mutant cells also activate the Chk1 at a non-permissive temperature and this activation of Chk1 takes place at the time of mitosis. Interestingly, top2–10 mutant cells retain their viability at a non-permissive temperature if the cells are not allowed to enter into mitosis. Taking together our results, we speculate that in the top2–10 mutant, the segregation of entangled chromatids during mitosis could result in delaying the mitotic progression through the activation of Chk1 kinase.

Information

Type
Research Papers
Copyright
Copyright © Cambridge University Press 2011
Figure 0

Table 1. Strains used in this study

Figure 1

Fig. 1. The ts10/top2–10 mutant allele shows conditional lethality with chk1 knockout: (a) Indicated strains were streaked on YEA plates and incubated at indicated temperature for 2–4 days before taking photograph. (b) Per cent survival in top2–10 chk1 knockout strain at a non-permissive temperature: indicated strains were grown till mid-log phase at 25°C then shifted at 34°C. Sample were collected at 2 h intervals, equal number of cells were plated on YEA plates and incubated at 25°C. Number of surviving colonies was calculated as the percentage of colonies appearing at permissive temperature. Values shown are the average of three independent experiments with standard deviation. (c) Per cent aberrant mitosis in top2–10 mutant cells at non-permissive temperature: indicated strains were grown till mid-log phase at 25°C and then shifted at 34°C. Cells were collected at the indicated time interval, fixed with 70% ethanol and stained with DAPI. Cells having aberrant chromosome segregation were counted.

Figure 2

Fig. 2. (a) top2–10 mutant cells exhibit chromosome segregation defect at a non-permissive temperature: cells were grown at 25°C till mid-log phase and then shifted at 34°C for 4 h, fixed with 70% ethanol and stained with DAPI. Arrow indicates defective chromosome segregation. (b) Schematic map of 15·4 kb region of plasmid (upper panel), indicating 8·0 and 4·0 kb HindIII fragment containing top2+ and apc10+ genes, respectively. Location of mutation in top2 gene has been shown in the lower panel. (c) Multiple alignment of Top2 from S. pombe (spTop2; accession no. P08096), Drosophila (dmTop2; accession no. P15348), S. cerevisiae (scTop2; accession no. P06786) and humans (hsTop2; accession no. P11388) are shown. The conserved arginine residue at position 288 in S. pombe is marked.

Figure 3

Fig. 3. Topoisomerase 2 mutant cells mildly delay the mitotic progression and activates checkpoint kinase Chk1: (a) cells were synchronized in S phase by growing them in 12 mM HU for 4 h at 25°C, washed and released at 34°C, samples were collected at 15 min interval and the fraction of binucleate or divided cells was determined as an indication of entry into mitosis using DAPI staining. (b) Indicated strains were grown at permissive temperature till mid-log phase then shifted at 34°C for indicated time. Protein lysate was prepared as described in Materials and methods, samples were run on 8% SDS-PAGE, transferred on nitrocellulose membrane and probed with anti-HA antibody. (c) Per cent survival in top2–10 mutant cells arrested in G2: indicated strains were grown till the mid-log phase at 25°C then shifted at 34°C. Samples were collected at a 2 h interval; equal number of cells were plated on YEA plates and incubated at 25°C. Number of surviving colonies was calculated as the percentage of colonies appearing at permissive temperature. Values shown are the average of three independent experiments with standard deviation. (d) Per cent survival in top2–10 mutant cells grown in the presence of TBZ: indicated strains were processed as described in (c) except that the cultures were shifted at 34°C in the presence or absence of 30 μg/ml TBZ.

Figure 4

Fig. 4. Cells were synchronized in S phase and released at non-permissive temperature as described in section 2. Samples were collected at 15 min interval, fixed with 70% ethanol and stained with calcofluor or with DAPI. About 200 cells were counted for each sample, (a) percent septation and (b) percent aberrant mitosis was plotted. (c) Per cent survival in synchronized top2–10 mutant cells: indicated strains were processed as above, samples were collected at a 30 min interval; equal number of cells were plated on YEA plates and incubated at 25°C. The number of surviving colonies was calculated as the percentage of colonies appearing at permissive temperature. Values shown are the average of three independent experiments with standard deviation. (d) Chk1 phosphorylation in synchronized top2–10 mutant cells: cells were synchronized in S phase with 12 mM HU and released at non-permissive temperature as described in section 2. Samples were collected at 1 h time interval. Protein lysate was prepared and Western blot was performed using anti-HA antibody.