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Examination of the predictive value of structural magnetic resonance scans in bipolar disorder: a pattern classification approach

Published online by Cambridge University Press:  05 June 2013

V. Rocha-Rego
Affiliation:
Department of Neuroimaging, Institute of Psychiatry, King's College London, UK NIHR Biomedical Research Centre for Mental Health at South London and Maudsley NHS Foundation Trust and Institute of Psychiatry, King's College London, UK
J. Jogia
Affiliation:
Department of Neuroimaging, Institute of Psychiatry, King's College London, UK
A. F. Marquand
Affiliation:
Department of Neuroimaging, Institute of Psychiatry, King's College London, UK
J. Mourao-Miranda
Affiliation:
Department of Neuroimaging, Institute of Psychiatry, King's College London, UK Computer Science Department, Centre for Computational Statistics and Machine Learning, University College London, UK
A. Simmons
Affiliation:
Department of Neuroimaging, Institute of Psychiatry, King's College London, UK NIHR Biomedical Research Centre for Mental Health at South London and Maudsley NHS Foundation Trust and Institute of Psychiatry, King's College London, UK MRC Centre for Neurodegeneration Research, Institute of Psychiatry, King's College London, UK
S. Frangou*
Affiliation:
Psychosis Research Program, Icahn School of Medicine at Mount Sinai, Icahn Medical Institute, New York, NY, USA
*
* Address for correspondence: Professor S. Frangou, Professor of Psychiatry, Chief, Psychosis Research Program, Icahn School of Medicine at Mount Sinai, Icahn Medical Institute, Box 1230, 1425 Madison Avenue, New York, NY 10029, USA. (Email: sophia.frangou@mssm.edu)
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Abstract

Background

Bipolar disorder (BD) is one of the leading causes of disability worldwide. Patients are further disadvantaged by delays in accurate diagnosis ranging between 5 and 10 years. We applied Gaussian process classifiers (GPCs) to structural magnetic resonance imaging (sMRI) data to evaluate the feasibility of using pattern recognition techniques for the diagnostic classification of patients with BD.

Method

GPCs were applied to gray (GM) and white matter (WM) sMRI data derived from two independent samples of patients with BD (cohort 1: n = 26; cohort 2: n = 14). Within each cohort patients were matched on age, sex and IQ to an equal number of healthy controls.

Results

The diagnostic accuracy of the GPC for GM was 73% in cohort 1 and 72% in cohort 2; the sensitivity and specificity of the GM classification were respectively 69% and 77% in cohort 1 and 64% and 99% in cohort 2. The diagnostic accuracy of the GPC for WM was 69% in cohort 1 and 78% in cohort 2; the sensitivity and specificity of the WM classification were both 69% in cohort 1 and 71% and 86% respectively in cohort 2. In both samples, GM and WM clusters discriminating between patients and controls were localized within cortical and subcortical structures implicated in BD.

Conclusions

Our results demonstrate the predictive value of neuroanatomical data in discriminating patients with BD from healthy individuals. The overlap between discriminative networks and regions implicated in the pathophysiology of BD supports the biological plausibility of the classifiers.

Information

Type
Original Articles
Creative Commons
Creative Common License - CCCreative Common License - BYCreative Common License - NCCreative Common License - SA
The online version of this article is published within an Open Access environment subject to the conditions of the Creative Commons Attribution-NonCommercial-ShareAlike licence . The written permission of Cambridge University Press must be obtained for commercial re-use.
Copyright
Copyright © Cambridge University Press 2013
Figure 0

Table 1. Demographic and clinical characteristics of the study samples

Figure 1

Fig. 1. A hypothetical example based on a simplified version of the Gaussian process classifier (GPC) decision function considering two gray matter (GM) voxels per image.

To provide an intuitive interpretation of the maps, we consider a simplified version of the GPC decision function. The class probability p is given by ply = class 11 x, w) = o(xt wI, where y is the class label of a test subject (if y > 05 corresponds to class 1, otherwise it corresponds to class 2), x is the feature vector containing gray matter voxels for the test subject, wis referred to as the maximum a posteriori estimate of the GPC weight vector, and is the best point estimate of the GPC decision function (i.e. the mode of the Gaussian approximation in voxel space) and a is a sigmoid function that maps the values to the interval [0,1). (A) Training phase: Through training the GPC classifier assigns for each voxel a weight value w = (+5, −5); +5 represents a voxel containing predictive contribution for class 1 displayed in red and −5 represents a voxel containing predictive contribution for class 2 (displayed in blue). (S)Test Phase: The feature vector (vector containing gray matter probability assigned for each voxel) is shown within each of the two voxels in the two-voxel image example. During the test phase, for classifying a new example we first mUltiplied each voxel by its corresponding coefficient in the weight vector. After that we add all multiplied values and pass the sum through a sigmoid function in order to obtain an output (i.e. predictive probabilities) between 0 and 1. In the illustrative eKample above: Subject 1: The feature vector for this subject is (0.5, 0.2). The predictive value for this subject is 0[(+5*0.5) + (−5*0.2)) = 0(0.5) which corresponds to a predictive probability above 0.5. Therefore subject 1 will be classified as class 1. For the subject 1, a low value in the voxel 2, which has negative coefficient in the weightvector, contributed to the classification of this subject as class 1. Subject 2: The feature vector for this subject is (0.5, 0.8). The predictive value for this subject is 0[(+5*0.5) + (−5*0.8)) = 0(−1.5) which corresponds to a predictive probability below 0.5. Therefore subject 2 will be classified as class 2. For subject 2, a high value in the voxel2, which has a positive coefficient in the weight vector, contributesto the classification ofthis subject as class 2.
Figure 2

Fig. 2. Discrimination maps for (a) gray matter (GM) and (b) white matter (WM) classification in cohort 1.

Figure 3

Fig. 3. Discrimination maps for (a) gray matter (GM) and (b) white matter (WM) classification in cohort 2.

Figure 4

Table 2. Cohort 1: gray matter (GM) regions discriminating between individuals with bipolar disorder (BD) and controls

Figure 5

Table 3. Cohort 1: white matter (WM) regions discriminating between individuals with bipolar disorder (BD) and controls

Figure 6

Table 4. Cohort 2: gray matter (GM) regions discriminating between individuals with bipolar disorder (BD) and controls

Figure 7

Table 5. Cohort 2: white matter (WM) regions discriminating between individuals with bipolar disorder (BD) and controls

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Rocha-Rego Supplementary Material

Appendix

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