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An agent-based model of COVID-19 pandemic and its variants using fuzzy subsets and real data applied in an island environment

Published online by Cambridge University Press:  06 March 2023

Sébastien Regis
Affiliation:
LAMIA Laboratory, French West Indies University, 97157, Pointe-à-Pitre, Guadeloupe, French West Indies; e-mails: Sebastien.Regis@univ-antilles.fr, Andrei.Doncescu@univ-antilles.fr
Olivier Manicom
Affiliation:
Office Surgery, 7 Rue Tah Bloudy, 97150, Marigot, Saint Martin, French West Indies; e-mail: armadadechirurgie@gmail.com
Andrei Doncescu
Affiliation:
LAMIA Laboratory, French West Indies University, 97157, Pointe-à-Pitre, Guadeloupe, French West Indies; e-mails: Sebastien.Regis@univ-antilles.fr, Andrei.Doncescu@univ-antilles.fr
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Abstract

In this paper, we present a model of the spread of the COVID-19 pandemic simulated by a multi-agent system (MAS) based on demographic data and medical knowledge. Demographic data are linked to the distribution of the population according to age and to an index of socioeconomic fragility with regard to the elderly. Medical knowledge are related to two risk factors: age and obesity. The contributions of this approach are as follows. Firstly, the two aggravating risk factors are introduced into the MAS using fuzzy sets. Secondly, the worsening of disease caused by these risk factors is modeled by fuzzy aggregation operators. The appearance of virus variants is also introduced into the simulation through a simplified modeling of their contagiousness. Using real data from inhabitants of an island in the Antilles (Guadeloupe, FWI), we model the rate of the population at risk which could be critical cases, if neither social distancing nor barrier gestures are respected by the entire population. The results show that hospital capacities are exceeded. The results show that hospital capacities are exceeded. The socioeconomic fragility index is used to assess mortality and also shows that the number of deaths can be significant.

Information

Type
Research Article
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
© The Author(s), 2023. Published by Cambridge University Press
Figure 0

Figure 1. Diagram representing the proposed approach.

Figure 1

Figure 2. Membership functions of the three classes in function of age (in years).

Figure 2

Table 1. Nutritional status according to BMI (Source: WHO—World Health Organization)

Figure 3

Figure 3. Membership functions of BMI (UW = Underweight, T = Thin, OW = Overweight, OI = Obesity of grade I, OII = Obesity of grade II, OIII = Obesity of grade III also called morbid Obesity); for details, see Miyahira and Araujo (2008), Miyahira et al. (2011).

Figure 4

Figure 4. Membership function of the three classes in function of BMI.

Figure 5

Figure 5. The transmissibility grid for the ‘classic’ COVID-19 in (a) and the transmissibility grid for a variant in (b). The black square represents the infected agent.

Figure 6

Table 2. Percentage distribution of different nutritional status (from BMI) according to age ranges

Figure 7

Figure 6. Linear regression of critical cases on total cases (for the 1000 runs). The abscissa axis represents the total number of cases and the ordinate axis represents the number of critical cases. The linearity indicates that the model is robust since it does not depend on the number of experiment.

Figure 8

Figure 7. Example of percentage of cumulative infected agent during one among the 1000 runs of the simulations during 37 days. It can be seen that the cumulative percentage (and therefore the number) of infected people increases gradually over the days of the simulation. Here, in this run, the final percentage is about 7%.

Figure 9

Table 3. Mean number of infected people on the 1000 runs of simulation

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Table 4. Mean and standard deviation of each level of severity for the two factor risks, age and BMI

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Table 5. Mean number of infected people on the 1000 runs of simulation

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Figure 8. Histogram of critical cases over the 1000 runs of the simulation.

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Table 6. Number and percentage of critical cases by age group for the SIR simulation (for more details, see Noll et al.,2020a)

Figure 14

Table 7. Comparison of percentage of critical cases by age group by simulations methods with real data from Guadeloupe (the critical cases of Guadeloupe were estimated by counting infected persons placed in intensive care during one of the weeks of the 2nd wave of COVID-19 in August–September 2020 (Agence régionale de Santé de Guadeloupe (Regional Health Agency of Guadeloupe), 2020)

Figure 15

Figure 9. Comparison of the cumulative number of actual infected with the cumulative number of infected calculated by the fuzzy MAS simulation and with the SIR approach.(real data source: see (Agence régionale de Santé de Guadeloupe (Regional Health Agency of Guadeloupe), 2020).

Figure 16

Table 8. ED between the real data and the two simulations (Fuzzy MAS model and SIR model)

Figure 17

Figure 10. Curves of the number of agents infected per day (daily average of 10 tests) over 30 days, respectively, for classic COVID-19 and for a variant.

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Figure 11. Representations of the number of agents infected per day (daily average of 10 tests) respectively for classic COVID-19 and for a variant over 200 days. The number of agents infected with the variant greatly exceeds that of the classical virus. The overtaking is done roughly around 67 days.

Figure 19

Figure 12. Comparison of the cumulative number of actual infected with the cumulative number of infected calculated by the fuzzy MAS simulation and with the SIR approach in summer 2021. (real data source: see (Agence régionale de Santé de Guadeloupe (Regional Health Agency of Guadeloupe August 2021), 2021).

Figure 20

Table 9. ED between the real data and the two simulations (Fuzzy MAS model and SIR model) for summer 2021

Figure 21

Table 10. Comparison between Guadeloupe and Martinique. Data on the number (Num) of deaths from COVID 19 come from Dong et al. (2020), fragility data come from Observatoire des fragilités (Fragility Observatory) (2020)