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Development of an individual-based model for polioviruses: implications of the selection of network type and outcome metrics

Published online by Cambridge University Press:  12 July 2010

H. RAHMANDAD*
Affiliation:
Department of Industrial and Systems Engineering, Virginia Tech, Falls Church, VA, USA
K. HU
Affiliation:
Department of Industrial and Systems Engineering, Virginia Tech, Falls Church, VA, USA
R. J. DUINTJER TEBBENS
Affiliation:
Kid Risk, Inc., Newton, MA, USA Delft Institute of Applied Mathematics, Delft University of Technology, Delft, The Netherlands
K. M. THOMPSON
Affiliation:
Kid Risk, Inc., Newton, MA, USA
*
*Author for correspondence: Dr H. Rahmandad, Department of Industrial and Systems Engineering, Virginia Tech, Falls Church, VA 22043, USA. (Email: hazhir@vt.edu)
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Summary

We developed an individual-based (IB) model to explore the stochastic attributes of state transitions, the heterogeneity of the individual interactions, and the impact of different network structure choices on the poliovirus transmission process in the context of understanding the dynamics of outbreaks. We used a previously published differential equation-based model to develop the IB model and inputs. To explore the impact of different types of networks, we implemented a total of 26 variations of six different network structures in the IB model. We found that the choice of network structure plays a critical role in the model estimates of cases and the dynamics of outbreaks. This study provides insights about the potential use of an IB model to support policy analyses related to managing the risks of polioviruses and shows the importance of assumptions about network structure.

Information

Type
Original Papers
Copyright
Copyright © Cambridge University Press 2010
Figure 0

Fig. 1. Examples of the five different theoretical network structures, with each network including 20 individuals (nodes) (n=20) and each node connecting to six other nodes on average (K=6). The initial layouts of nodes in the networks shown in panels (a)–(c) appear as a ring, but the reasonable representation of the initial structure for the networks shown in panels (d)–(e) require random distribution of nodes. The network obtained in panel (e) results from rewiring the network in panel (d) as described in the text.

Figure 1

Fig. 2. Immunity and infectiousness states based on [9] along with possible transitions in the IB model.

Figure 2

Table 1. Summary of model inputs for an individual-based model that differ from those used for the differential equation-based (DEB) model [9] via different types of social contact networks

Figure 3

Table 2. Summary of model inputs for the IB model that differ from those used for the DEB model [9] for the different networks structures described in Table 1

Figure 4

Table 3. Results of 1000 simulations of the fraction of ‘die-out’ cases (dimensionless) for 26 combinations of different network structures and numbers of connections between individuals (K)

Figure 5

Fig. 3. Visual representation of the behaviour of outbreaks for eight selected simulated networks as a function of time: (a) number of infections occurring in fully susceptible people as a function of time, and (b) accumulated number of paralytic cases as a function of time.

Figure 6

Table 4. Results of 100 simulations for outbreak metrics for 26 combinations of different networks and values of K based on the subsets of simulations in which outbreaks did not die out (robust simulation mean, in units indicated for each metric)

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Rahmandad Supplementary Material

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