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Direct cost savings associated with reduction in plasma metagenomic sequencing

Published online by Cambridge University Press:  21 October 2025

Caitlin Naureckas Li*
Affiliation:
Northwestern University Feinberg School of Medicine, Chicago, IL, USA Division of Infectious Diseases, Ann and Robert H. Lurie Children’s Hospital of Chicago, Chicago, IL, USA
Neil Jordan
Affiliation:
Northwestern University Feinberg School of Medicine, Chicago, IL, USA
Shannon Haymond
Affiliation:
Northwestern University Feinberg School of Medicine, Chicago, IL, USA Department of Pathology and Laboratory Medicine, Ann and Robert H. Lurie Children’s Hospital of Chicago, Chicago, IL, USA
David Koscinski
Affiliation:
Department of Information Management, Ann and Robert H. Lurie Children’s Hospital of Chicago, Chicago, IL, USA
Ravi Jhaveri
Affiliation:
Northwestern University Feinberg School of Medicine, Chicago, IL, USA Division of Infectious Diseases, Ann and Robert H. Lurie Children’s Hospital of Chicago, Chicago, IL, USA
*
Corresponding author: Caitlin Naureckas Li; Email: cli@luriechildrens.org
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Abstract

Following recognition that our hospital had higher use of plasma metagenomic next-generation sequencing than our peers, we implemented a process for approval by infectious diseases before test collection. This intervention is calculated to result in a direct cost savings of $79,505–$84,057/year, driven mainly by reduced laboratory costs.

Information

Type
Concise Communication
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
© The Author(s), 2025. Published by Cambridge University Press on behalf of The Society for Healthcare Epidemiology of America
Figure 0

Figure 1. Panel A shows the counts of plasma mNGS sent by month, with the center line showing that the average number per month decreases from 7.8 to 4.6 per month following initiation of the second sign process. 91 total tests were sent in 2020, 92 in 2021, 73 in 2022, and 65 in 2023. Panel B shows the counts of BAL galactomannan samples sent over the same time with no special cause variation identified.BAL, bronchoalveolar lavage; mNGS, metagenomic next-generation sequencing.

Figure 1

Table 1. Estimated costs associated with ordering plasma metagenomic next-generation sequencing

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