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Flexible outlier detection in multicenter clinical trials

Published online by Cambridge University Press:  05 June 2026

Joseph Rigdon*
Affiliation:
Wake Forest University School of Medicine, Winston-Salem, NC, USA
Santiago Saldana
Affiliation:
Wake Forest University School of Medicine, Winston-Salem, NC, USA
Sawyer Welden
Affiliation:
Noregon Systems, Greensboro, NC, USA
W. Jack Rejeski
Affiliation:
Wake Forest University, Winston-Salem, NC, USA
Edward Melanson
Affiliation:
University of Colorado Anschutz Medical Campus, Aurora, CO, USA
Neil Johannsen
Affiliation:
Louisiana State University Pennington Biomedical Research Center, Baton Rouge, LA, USA
Cynthia Stowe
Affiliation:
Wake Forest University School of Medicine, Winston-Salem, NC, USA
Michael Miller
Affiliation:
Wake Forest University School of Medicine, Winston-Salem, NC, USA
*
Corresponding author: J. Rigdon; Email: joseph.rigdon@wfusm.edu
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Abstract

Introduction:

Multicenter clinical trials have become increasingly larger and more complex yet assuring high-quality data remains an essential task for data coordinating centers.

Methods:

A flexible algorithm is presented to exhaustively search for potential data anomalies by participant and site. The algorithm proceeds as a three-phase collaboration between the data coordinating center and clinical sites. First, participant-level data are examined in a univariate approach for all relevant variables. Values at the extreme tails of the distribution that also lie outside range checks and are previously unverified by clinical sites are deemed potential outliers. Second, participant-level data are examined in a multivariate machine learning approach among meaningful groups of related variables, e.g., weight and body mass index. Third, site-level differences are characterized using statistical tests and standardized differences, both adjusted and unadjusted for site demographics. Findings are discussed with sites and, if needed, alterations can be made to procedures for data collection. For illustration, the algorithm is applied to data collected in the Molecular Transducers of Physical Activity Consortium (MoTrPAC) study.

Results:

Application of the algorithm to MoTrPAC yielded an evaluation of over 1.9 million observations in n = 1029 study participants. Numerous individual univariate, multivariate, and site-level outliers were identified that were previously unidentified by existing data evaluation processes.

Conclusion:

It is recommended to apply this algorithm to a subset of participants early in a study, with repeated explorations over subsequent intervals throughout the study. The goal is to maximize data quality, particularly critical to the increasing occurrence of open-source, data resources.

Information

Type
Research Article
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
© The Author(s), 2026. Published by Cambridge University Press on behalf of Association for Clinical and Translational Science
Figure 0

Figure 1. Figure 1 long description.Process map for outlier detection algorithm. The figure identifies outlier category as column headers for the three phases of data inspection. Each phase has multiple steps, which are divided into rows.

Figure 1

Table 1. Selected case report forms and times of collection in the molecular transducers of physical activity consortium (MoTrPAC) study. Number of variables abbreviated as # vars

Figure 2

Figure 2. Figure 2 long description.Heatmap displaying individual univariate outliers found using interquartile range criteria alone.

Figure 3

Figure 3. Heatmap displaying individual univariate outliers found using interquartile range criteria, and range rule checks.

Figure 4

Figure 4. Figure 4 long description.Heatmap displaying individual univariate outliers found using interquartile range criteria, range rule checks, and query verifications.

Figure 5

Figure 5. Results of application of multivariate outlier detection procedure to key measures (watts, heart rate, VO2 max) in acute endurance exercise test. Panel (a) shows boxplots of the outlier scores for all endurance exercise study participants, and panels (b–d) show trajectories of outlier observations (>0.7). In panels (b–d), the median trajectory is displayed in bold black.

Figure 6

Table 2. Subset of variables in the molecular transducers of physical activity consortium (MoTrPAC) study identified as having site-level differences

Figure 7

Table 3. P-values and standardized differences for subset of variables in the molecular transducers of physical activity consortium (MoTrPAC) study identified as having site-level differences. Sites labeled as {A, B, …, J} to preserve de-identification. p-Values only displayed if <0.05, and standardized differences displayed if >0.5

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