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Quantitative regeneration: Skoog and Miller revisited

Published online by Cambridge University Press:  07 September 2023

Charles W. Melnyk*
Affiliation:
Department of Plant Biology, Linnean Center for Plant Biology, Swedish University of Agricultural Sciences, Uppsala, Sweden
*
Corresponding author: Charles W. Melnyk; Email: charles.melnyk@slu.se

Abstract

In 1957, Skoog and Miller published their seminal work on the effects of hormones upon plant growth. By varying the concentrations of auxin and cytokinin, they observed dramatic differences in shoot and root growth from tobacco stem cultures. Their finding that quantitative differences in hormone concentrations could dramatically alter the fate of developing organs provided a foundation for understanding organ formation and tissue regeneration. Their in vitro assays established plant propagation techniques that were critical for regenerating transgenic plants. Here, I discuss their original paper, what led to their findings and its impact on our understanding of hormone interactions, how plants regenerate and in vitro tissue culture techniques.

Information

Type
Classics
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (https://creativecommons.org/licenses/by/4.0), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
© The Author(s), 2023. Published by Cambridge University Press in association with The John Innes Centre
Figure 0

Figure 1. Findings and outcomes from Skoog and Miller. (a) A central finding from Skoog and Miller (1957) demonstrated that varying levels of auxin (indole-3-acetic acid; IAA) and cytokinin (kinetin) result in shoot formation or callus formation from Nicotiana stem segments. In this experiment, kinetin levels were too high to allow root formation. Image taken from Plate 4 of Skoog and Miller (1957). (b) Auxin and cytokinin are both required for organogenesis but also antagonise each other to promote either root or shoot formation. High auxin and low cytokinin, the basis for root-inducing media (RIM), promote root formation. High cytokinin and low auxin, the basis for shoot-inducing media (SIM), promote shoot formation. Equal levels of auxin and cytokinin, the basis for callus-inducing media (CIM), promote callus formation. These in vitro organ formation experiments have proven critical for understanding tissue regeneration and hormone-mediated organ patterning, whereas the use of CIM, SIM and RIM has been critical for both plant propagation and the regeneration of transgenic plants. Figure 1(a) © Cambridge University Press, 1957. Please note, the Open Access licence covering this article does not apply to this image.

Author comment: Quantitative regeneration: Skoog and Miller revisited — R0/PR1

Comments

Dear Editor,

Please see attached my classics review. I apologise this is coming so late!

Best regards,

Charles

Review: Quantitative regeneration: Skoog and Miller revisited — R0/PR2

Conflict of interest statement

Reviewer declares none.

Comments

This review manuscript by Melnyk deals with a landmark research paper by Skoog & Miller (1957), which reported plant tissue culture technique and has provided fundamental rules in plant regeneration; high auxin/cytokinin ratio leads to root regeneration, low auxin/cytokinin ratio enhances shoot regeneration, and middle of that promote and maintain callus formation. The author carefully researched historical background on how Skoog and his colleagues found the auxin/cytokinin rule. Importantly, the author discusses molecular mechanisms behind the rule from our current knowledge about 70 years later. This reviewer finds the manuscript to be a concise and well-summarized overview, and agrees that the three implications highlighted by the author underscore the significance of the Skoog & Miller paper in plant science. I have a few miner comments of the manuscript.

Miner comments:

(Line 45-47) This sentence should be told by inference. Or better to cite a paper describing “these years were exciting time” by a scientist who worked in the era.

(Line 167-169) If the author wishes to emphasize that pericycle cells are totipotent, it may be better to modify the end of the sentence to say “can give rise to whole plant regeneration.” Alternatively, the author could consider changing the word “totipotency” to “pluripotency.”

Review: Quantitative regeneration: Skoog and Miller revisited — R0/PR3

Conflict of interest statement

Reviewer declares none.

Comments

This is a nice review on the historical significance and current relevance of a classic paper by Skoog and Miller on quantitative auxin/cytokinin applications. Overall, I think the review is well written. The only conceptual topic that I think needs to be developed a bit more is dedifferentiation/re-differentiation versus transdifferentiation. I provide details on where that clarification can be added, below.

Line 40: I think the word “earned” rather than “did” works better here.

Lines 58-60: This sentence could be reworded to read more smoothly:

“This discovery provided an explanation for how plants grow 59 and allowed scientists to apply exogenously this hormone to a multitude of species and 60 tissues in various experimental setups.”

Line 91: I think “concentrations” rather than “concentrates” should be used in this sentence.

Line 158: This is an opportunity to cover the different cellular trajectories involved in regeneration: i.e. - de-differentiation/re-differentiation/transdifferentiation.

Lines 156-159: I think the author is distinguishing the idea that only a subset of cells in Nicotiana stems are totipotent/competent to regenerate, versus a model where almost any cell in the stem can redifferentiate/transdifferentiate. If this is the case, it would be helpful to set these two sentences up as opposing models for regeneration:

“One idea is that tissues like Nicotiana stems contain totipotent 157 stem cells that can give rise to any tissue or cell type (Birnbaum and Sanchez Alvarado, 158 2008). Another is that existing cells can differentiate to form new cell types that give rise to 159 organs (Birnbaum and Sanchez Alvarado, 2008)”

Lines 162-164: missing word

“Transcriptional analyses of these callus masses, whether 163 derived from roots or aerial tissues, revealed that had a similar identity to lateral root tips 164 (Sugimoto et al., 2010).”

Lines 164-167: This is an interpretation from transcriptional affinities. It doesn’t provide lineage analysis that definitively demonstrates which cells give rise to callus, so I recommend revising the strength of this statement, by writing something along the lines of “this data indicates that…”:

“Thus, not all plant cells gave rise to callus but instead only a subset 165 of the pericycle cells adjacent to the xylem and such masses were not undifferentiated but 166 instead resembled root tips regardless of their tissue origin (Atta et al., 2009; Sugimoto et al., 167 2010).”

Lines 167-169: Transdifferentiate should be clarififed as a concept separate from de/re differentiation (Line 158 offers a nice opportunity for introducing these concepts):

“It seems appropriate then to consider xylem pole pericycle cells as having totipotency 168 that, upon auxin and cytokinin treatment, transdifferentiate to other cell types to give rise to 169 de novo organ formation.”

Line 177: “plant(s)” should be plural

Lines 187-189: I’m not sure about the intended meaning of this sentence. I think it could be revised for clarity.

“Although Miller and Skoog established several fundamental ideas 188 behind modern tissue culture, most regeneration protocols today involve such indirect 189 techniques.”

Lines 192-193: This is the first time that Plate 4 is mentioned. It would be helpful to mention this earlier in the text and provide a brief description of the data and its significance.

Figure: Nice overview figure. Some structural rearrangements and modifications to the labels could improve clarity. Because the auxin/cytokinin arrows in “B” are adjacent to “A”, it looks like they’re supposed to correspond with hormone concentrations in “A”, which they don’t. Positioning “B” below “A” can help break this association. RIM, CIM, and SIM are familiar terms for people working in plant tissue culture, but they’re not common terms for general plant biologists, so I recommend spelling the abbreviations out. The arrows coming out of the CIM cartoon indicate that the hormone concentration is associated with the direction of the arrow (e.g. “plant propagation techniques” are associated with relatively high auxin concentrations). Rather than use arrows, the author could make a list of the research areas that have been fueled by quantitative hormone applications and use a triangular wedge to connect the list to the cartoon.

Recommendation: Quantitative regeneration: Skoog and Miller revisited — R0/PR4

Comments

Dear Dr. Melnyk,

Thank you for submitting your manuscript “Quantitative regeneration: Skoog and Miller revisited” to QPB-Classics. I have now received all the referees‘ reports on the above manuscript, and have reached a decision. The referees’ comments are appended below, or you can access them online.

As you will see, both referees express considerable interest in your review article, but have some minor suggestions as well.

More specifically, the two reviewers found your paper concise, well written as it nicely summarizes the historical significance and the current relevance of a classic paper by Skoog and Miller on quantitative auxin/cytokinin applications. At the same time they have suggested that some technical terms need to be carefully selected [ For example: “totipotency”/“pluripotency.”; dedifferentiation/re-differentiation versus transdifferentiation]; they asked for some clarifications to be added where indicated within the text, and proposed some changes to the Figure, as well.

If you are able to revise the manuscript along the lines suggested, which I believe should mainly involve further text editing, I will be happy to receive a revised version of the manuscript for further consideration. Your revised paper will be re-reviewed by one or more of the original referees, and acceptance of your manuscript will depend on your addressing satisfactorily the reviewers' minor concerns.

Please attend to all of the reviewers‘ comments and ensure that you clearly highlight all changes made in the revised manuscript. Please avoid using ’Tracked changes‘ in Word files as these are lost in PDF conversion. I should be grateful if you would also provide a point-by-point response detailing how you have dealt with the points raised by the reviewers. Alternatively, if you do not agree with any of the referees’ criticisms or suggestions, please explain clearly why this is so.

Thank you again for submitting your nice review article to QPB, and I am looking forward to receiving your revised manuscript.

Sincerely,

Ali FERJANI

Quantitative Plant Biology, Associate Editor

Decision: Quantitative regeneration: Skoog and Miller revisited — R0/PR5

Comments

No accompanying comment.

Author comment: Quantitative regeneration: Skoog and Miller revisited — R1/PR6

Comments

Dear Dr Hamant and Dr Ferjani,

Thanks for your comments and suggestions. I have revised the manuscript in light of the reviewer’s comments. Apologies this took so long. Hopefully the revised manuscript has addressed the previous issues and would be of interest to readers of Quantitative Biology.

Best regards,

Charles

Review: Quantitative regeneration: Skoog and Miller revisited — R1/PR7

Conflict of interest statement

Reviewer declares none.

Comments

The authors have adequately addressed all the points raised in the first version of the manuscript.

Review: Quantitative regeneration: Skoog and Miller revisited — R1/PR8

Conflict of interest statement

Reviewer declares none.

Comments

Thanks for addressing the minor revisions. This is a nice addition to the field of regeneration biology!

Recommendation: Quantitative regeneration: Skoog and Miller revisited — R1/PR9

Comments

Dear Dr Melnyk,

Thank you for resubmitting your revised manuscript QPB-22-0018.R1 “Quantitative regeneration: Skoog and Miller revisited” to the QPB-Classics. Both reviewers and I found that you have adequately addressed all the minor points raised in the first version of the manuscript. Therefore, I am happy to recommend the publication of your invited article as is.

Thank you very much again for submitting your article to QPB, which we believe will represent a nice addition to the field of plant regenerative biology.

Sincerely,

Ali Ferjani

Associate Editor, Quantitative Plant Biology

Decision: Quantitative regeneration: Skoog and Miller revisited — R1/PR10

Comments

No accompanying comment.