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MicroRNA expression profile in patients with cystic echinococcosis and identification of possible cellular pathways

Published online by Cambridge University Press:  14 January 2021

S. Orsten*
Affiliation:
Hacettepe University, Vocational School of Health Services, Adnan Saygun Street, D-Blocks, Altındag 06100, Ankara, Turkey
İ. Baysal
Affiliation:
Hacettepe University, Vocational School of Health Services, Adnan Saygun Street, D-Blocks, Altındag 06100, Ankara, Turkey
S. Yabanoglu-Ciftci
Affiliation:
Faculty of Pharmacy, Department of Biochemistry, Hacettepe University, Ankara, Turkey
T. Ciftci
Affiliation:
Faculty of Medicine, Department of Radiology, Hacettepe University, Ankara, Turkey
A. Azizova
Affiliation:
Faculty of Medicine, Department of Radiology, Hacettepe University, Ankara, Turkey
D. Akinci
Affiliation:
Faculty of Medicine, Department of Radiology, Hacettepe University, Ankara, Turkey
Y. Akyon
Affiliation:
Faculty of Medicine, Department of Medical Microbiology, Hacettepe University, Ankara, Turkey
O. Akhan
Affiliation:
Faculty of Medicine, Department of Radiology, Hacettepe University, Ankara, Turkey
*
Author for correspondence: S. Örsten, E-mail: serra.orsten@hacettepe.edu.tr
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Abstract

Cystic echinococcosis (CE) is a neglected tropical disease, caused by metacestode (larval) form of the Echinococcus granulosus sensu lato (sl) in humans. MicroRNAs (miRNAs) are small, stable, tissue-specific RNA molecules encoded by the genome that are not translated into proteins. Circulating miRNA expression profiles vary in health and disease. The aim of this study is to determine the altered cellular pathways in CE by comparing the miRNA profiles of controls and CE patients with active or inactive cysts. Following abdominal ultrasonography (US) examination, 20 patients diagnosed with active CE (CE1, CE2, CE3a and CE3b) or inactive CE (CE4 and CE5) and three healthy controls were included in the study. The expression profiles of 372 biologically relevant human miRNAs were investigated in serum samples from CE patients and healthy controls with miScript miRNA HC PCR Array. Compared with the control group, expression of 6 miRNAs (hsa-miR-4659a-5p, hsa-miR-4518, hsa-miR-3977, hsa-miR-4692, hsa-miR-181b-3p, hsa-miR-4491) and one miRNA (hsa-miR-4687-5p) were found to be downregulated in CE patients with active and inactive cysts, respectively (p < 0.05). For downregulated miRNAs in this study, predicted targets were found to be associated mainly with cell proliferation, apoptosis, cell-cell interactions and cell cycle regulation. Further studies in this direction may elucidate the pathogenesis of human CE and the relationship between CE and other pathologies.

Information

Type
Research Paper
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution, and reproduction in any medium, provided the original work is properly cited.
Copyright
Copyright © The Author(s), 2021. Published by Cambridge University Press
Figure 0

Table 1. Characteristics of patients.

Figure 1

Fig. 1. Heatmap of miRNA expressions among CE patients and healthy control groups. The map is produced by using the online GeneGlobe Data Analysis Center (https://geneglobe.qiagen.com/no/analyze/).

Figure 2

Fig. 2. Compared to control group downregulated miRNAs in active and inactive CE patients with a significant relative expression fold change (p < 0.05).