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Genebank tools for efficient management of viral infections in tropical clonal crops

Published online by Cambridge University Press:  20 April 2026

Esther Uchendu*
Affiliation:
Genetic Resources Center, International Institute of Tropical Agriculture (IITA), Ibadan, Nigeria Department of Crop and Horticultural Sciences, University of Ibadan, Ibadan, Nigeria
Olufisayo Kolade
Affiliation:
International Institute of Tropical Agriculture (IITA), Ibadan, Nigeria
Morufat Balogun
Affiliation:
Genetic Resources Center, International Institute of Tropical Agriculture (IITA), Ibadan, Nigeria Department of Crop Protection and Environmental Biology, University of Ibadan, Ibadan, Nigeria
Michael Abberton
Affiliation:
Genetic Resources Center, International Institute of Tropical Agriculture (IITA), Ibadan, Nigeria
*
Corresponding author: Esther Uchendu; Email: e.uchendu@cgiar.org
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Abstract

Plant viruses cause considerable damage in agriculture through high losses in yield or productivity, and quality of crops. Unfortunately, there are few direct control mechanisms in place for viruses and very few protocols for eliminating them due to the wide diversity of viruses. Some viruses of clonal crops are easily removed through meristem culture, but many others are more intricately associated with the meristematic cells or localized in the plant genome where they pose significant risks to plant health and productivity, thus require eradication. Viruses such as Yam Mosaic Virus (YMV) and Yam Mild Mosaic Virus (YMMV) damage the economic and food security benefits provided by the tropical clonal crops. This report presents an overview of the viral challenges of tropical clonal crops. It also provides information on the state of current knowledge of various sanitation options available against viruses affecting the clonal crops. This report provides a reference to genebanks for early accurate detection and elimination of viruses among in vitro-grown tropical plants which, is a major step towards the improvement of the quality of clonal germplasm stored or distributed by the concerned genebanks. The information brought to light in this report could lead to technical refinement of the existing procedures or creation of new protocols for virus-infected germplasm.

Information

Type
Critical Review
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
© The Author(s), 2026. Published by Cambridge University Press on behalf of National Institute of Agricultural Botany.
Figure 0

Figure 1. Field (A–C), In Vitro (D) and Cryobanking (E) of clonal crops at the Genetic Resources Center of the International Institute of Tropical Agriculture (IITA), Ibadan, Nigeria.

Conservation of clonal crops biodiversity in the field, in vitro and cryobanking facilities at the International Institute of Tropical Agriculture (IITA), Ibadan, Nigeria
Figure 1

Figure 2. Manihot esculenta Crantz leaf chlorosis and curling.

Virus symptions (leaf chlorosis and curling) on diseased cassava (Manihot esculenta Crantz) field plants
Figure 2

Figure 3. Stem cuttings of Manihot esculenta Crantz undergoing thermotherapy at 38 °C for four weeks at the facility of the Genetic Resources Center, International Institute of Tropical Agriculture.

Heat treatment (30OC) of diseased cassava (Manihot esculenta Crantz) stem cuttings for virus eradication
Figure 3

Figure 4. Shoot tips (≤1 mm) of D. rotundata Poir (A) undergoing cryotherapy at − 196 OC in liquid nitrogen (B).

Major steps of virus eradication from diseased tissue of yam (D. rotundata Poir) through cryotherapy
Figure 4

Figure 5. Exposure of clonal plant tissue, shoot tips (A) to electromagnetic field (B).

Figure 5

Figure 6. Symptoms of virus infestation (A) Banana streak, (B) Banana Bract Mosaic, (C) Yam Mosaic and (D) Cassava Mosaic.

Figure 6

Figure 7. Generalized plant tissue culture operational workflow.

Figure 7

Table 1. Common viruses infecting major tropical clonal crops

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Table 2. Effective in vitro cleaning methods for major tropical clonal crops