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Salmonella Hadar linked to two distinct transmission vehicles highlights challenges to enteric disease outbreak investigations

Published online by Cambridge University Press:  13 May 2024

Joshua M. Brandenburg
Affiliation:
Division of Foodborne, Waterborne and Environmental Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA Oak Ridge Institute for Science and Education, Oak Ridge, TN, USA
Gregory Sean Stapleton
Affiliation:
Division of Foodborne, Waterborne and Environmental Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA Oak Ridge Institute for Science and Education, Oak Ridge, TN, USA
Kelly E. Kline
Affiliation:
Pennsylvania Department of Health, Harrisburg, PA, USA
Jennifer Khoury
Affiliation:
Kentucky Department for Public Health, Frankfort, KY, USA
Krystle Mallory
Affiliation:
New Hampshire Division of Public Health Services, Concord, NH, USA
Kimberly D. Machesky
Affiliation:
Ohio Department of Health, Columbus, OH, USA
Stephen G. Ladd-Wilson
Affiliation:
Oregon Health Authority, Public Health Division, Portland, OR, USA
Ryan Scholz
Affiliation:
Oregon Department of Agriculture, Salem, OR, USA
Jennifer Freiman
Affiliation:
U.S. Department of Agriculture, Office of Public Health Science, Food Safety and Inspection Service, Washington, DC, USA
Colin Schwensohn
Affiliation:
Division of Foodborne, Waterborne and Environmental Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA
Alexandra Palacios
Affiliation:
Division of Foodborne, Waterborne and Environmental Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA Oak Ridge Institute for Science and Education, Oak Ridge, TN, USA
Laura Gieraltowski
Affiliation:
Division of Foodborne, Waterborne and Environmental Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA
Zachary Ellison
Affiliation:
Division of Foodborne, Waterborne and Environmental Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA ASRT, Inc., Suwanee, GA, USA
Beth Tolar
Affiliation:
Division of Foodborne, Waterborne and Environmental Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA
Hattie E. Webb
Affiliation:
Division of Foodborne, Waterborne and Environmental Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA
Kaitlin A. Tagg
Affiliation:
Division of Foodborne, Waterborne and Environmental Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA
Zainab Salah
Affiliation:
Division of Foodborne, Waterborne and Environmental Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA
Megin Nichols*
Affiliation:
Division of Foodborne, Waterborne and Environmental Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA
*
Corresponding author: Megin Nichols; Email: gpg6@cdc.gov
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Abstract

In 2020, an outbreak of Salmonella Hadar illnesses was linked to contact with non-commercial, privately owned (backyard) poultry including live chickens, turkeys, and ducks, resulting in 848 illnesses. From late 2020 to 2021, this Salmonella Hadar strain caused an outbreak that was linked to ground turkey consumption. Core genome multilocus sequence typing (cgMLST) analysis determined that the Salmonella Hadar isolates detected during the outbreak linked to backyard poultry and the outbreak linked to ground turkey were closely related genetically (within 0–16 alleles). Epidemiological and traceback investigations were unable to determine how Salmonella Hadar detected in backyard poultry and ground turkey were linked, despite this genetic relatedness. Enhanced molecular characterization methods, such as analysis of the pangenome of Salmonella isolates, might be necessary to understand the relationship between these two outbreaks. Similarly, enhanced data collection during outbreak investigations and further research could potentially aid in determining whether these transmission vehicles are truly linked by a common source and what reservoirs exist across the poultry industries that allow Salmonella Hadar to persist. Further work combining epidemiological data collection, more detailed traceback information, and genomic analysis tools will be important for monitoring and investigating future enteric disease outbreaks.

Information

Type
Original Paper
Creative Commons
Creative Common License - CCCreative Common License - BY
This is a work of the US Government and is not subject to copyright protection within the United States. To the extent this work is subject to copyright outside of the United States, such copyright shall be assigned to Centers for Disease Control and Prevention and licensed to the Publisher. Outside of the United States, the US Government retains a paid-up, non-exclusive, irrevocable worldwide licence to reproduce, prepare derivative works, distribute copies to the public and display publicly the Contribution, and to permit others to do so. Published by Cambridge University Press.
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
© Centers for Disease Control and Prevention, 2024.
Figure 0

Figure 1. People infected with the strain of Salmonella Hadar by state of residence, identified as part of the backyard-poultry-associated outbreak (a) and ground-turkey-associated outbreak (b). Icons and the number within correspond to the number of isolates from that sample type.

Figure 1

Figure 2. Epidemic curve of reported illnesses by onset date. People infected with the backyard poultry-associated outbreak strain of Salmonella Hadar (n = 848) and people infected with the ground turkey-associated outbreak strain of Salmonella Hadar (n = 34) by date of illness onset, United States, 2020–2021.

Figure 2

Figure 3. Traceback diagram depicting 10 hatchery sources among 7 of 48 (15%) companies with traceable poultry purchase locations in the backyard-poultry-associated outbreak.

Figure 3

Figure 4. cgMLST analysis of 950 Salmonella Hadar isolates related by 0–16 allele differences identified during the backyard poultry-associated outbreak and ground turkey-associated outbreak from human, food, animal, or environmental sources. The inner ring (black colour) of this diagram is a phylogenetic tree demonstrating relatedness of the 950 isolates. The middle ring (blue or purple colour) designates which outbreak investigation each isolate belongs to. The outermost ring designates whether isolates were obtained from food products (pink colour) or backyard poultry or their environment (black colour); isolates without this label are clinical isolates.