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Molecular evidence for hybridization in the aquatic plant Limosella on sub-Antarctic Marion Island

Published online by Cambridge University Press:  01 April 2021

John H. Chau*
Affiliation:
Centre for Ecological Genomics and Wildlife Conservation, Department of Zoology, University of Johannesburg, Auckland Park 2006, South Africa
Michelle Greve
Affiliation:
Department of Plant and Soil Sciences, University of Pretoria, Hatfield 0028, South Africa
Bettine Jansen van Vuuren
Affiliation:
Centre for Ecological Genomics and Wildlife Conservation, Department of Zoology, University of Johannesburg, Auckland Park 2006, South Africa
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Abstract

DNA sequence data have become a crucial tool in assessing the relationship between morphological variation and genetic and taxonomic groups, including in the Antarctic biota. Morphologically distinct populations of submersed aquatic vascular plants were observed on sub-Antarctic Marion Island, potentially representing the two species of such plants listed in the island's flora, Limosella australis R.Br. (Scrophulariaceae) and Ranunculus moseleyi Hook.f. (Ranunculaceae). To confirm their taxonomic identity, we sequenced a nuclear locus (internal transcribed spacer; ITS) and two plastid loci (trnL-trnF, rps16) from three specimens collected on Marion Island and compared the sequences with those in public sequence databases. For all three loci, sequences from the Marion Island specimens were nearly identical despite morphological dissimilarity, and phylogenetic analyses resolved them to a position in Limosella. In phylogenetic trees and comparisons of species-specific sequence polymorphisms, the Marion Island specimens were closest to a clade comprising Limosella aquatica L., L. curdieana F.Muell. and L. major Diels for ITS and closest to L. australis for the plastid loci. Cytonuclear discordance suggests a history of hybridization or introgression, which may have consequences for morphological variability and ecological adaptation.

Information

Type
Biological Sciences
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution, and reproduction in any medium, provided the original work is properly cited.
Copyright
Copyright © The Author(s), 2021. Published by Cambridge University Press
Figure 0

Fig. 1. Distribution and morphology of sampled Limosella specimens from Marion Island. a. Collection localities on Marion Island. b. J.H. Chau 331 c. J.H. Chau 333 d. W.A. Haddad 1023.

Figure 1

Table I. Collection and voucher information for sampled specimens from Marion Island and GenBank accession numbers for sequences. ITS = internal transcribed spacer; PRU = University of Pretoria herbarium.

Figure 2

Fig. 2. Phylogenetic trees from maximum likelihood analyses of DNA sequence data from Marion Island specimens and from the National Center for Biotechnology Information (NCBI) GenBank database. Taxa outside Limosella have been pruned from trees. Species and GenBank accession numbers are shown at the tips. Bootstrap support values for nodes > 70% are shown on the branches. a. Nuclear internal transcribed spacer (ITS); b. plastid trnL-trnF; c. plastid rps16.

Figure 3

Table II. Species-specific sequence polymorphisms in the Limosella aquatica clade (L. aquatica, L. curdieana, L. major), L. australis and Marion Island specimens in the nuclear internal transcribed spacer (ITS) locus, listed by their position in the sequence alignment. The number of sequences examined for each species or clade is given in parentheses.

Figure 4

Table III. Species-specific sequence polymorphisms in the Limosella aquatica clade (L. aquatica, L. curdieana, L. major), L. australis and Marion Island specimens in the plastid trnL-trnF locus, listed by their position in the sequence alignment. The number of sequences examined for each species or clade is given in parentheses.

Figure 5

Table IV. Species-specific sequence polymorphisms in the Limosella aquatica clade (L. aquatica, L. curdieana, L. major), L. australis and Marion Island specimens in the plastid rps16 locus, listed by their position in the sequence alignment. The number of sequences examined for each species or clade is given in parentheses.

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