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Comparative characterisation of human and ovine non-aureus staphylococci isolated in Sardinia (Italy) for antimicrobial susceptibility profiles and resistance genes

Published online by Cambridge University Press:  29 January 2021

C. M. Longheu
Affiliation:
Istituto Zooprofilattico Sperimentale della Sardegna ‘G. Pegreffi’, 07100 Sassari, Italy
E. Azara
Affiliation:
Istituto Zooprofilattico Sperimentale della Sardegna ‘G. Pegreffi’, 07100 Sassari, Italy
S. Attene
Affiliation:
Ospedale ‘San Francesco’, 08100 Nuoro, Italy
S. Sanna
Affiliation:
Azienda Ospedaliera Universitaria, 07100 Sassari, Italy
M. Sale
Affiliation:
Ospedale ‘A. Segni’, 07014 Ozieri, Italy
M. F. Addis
Affiliation:
Dipartimento di Medicina Veterinaria, Università degli Studi di Milano, 20133 Milano, Italy
S. Tola*
Affiliation:
Istituto Zooprofilattico Sperimentale della Sardegna ‘G. Pegreffi’, 07100 Sassari, Italy
*
Author for correspondence: S. Tola, E-mail: sebastiana.tola@izs-sardegna.it
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Abstract

We present the comparative characterisation of 195 non-aureus staphylococci (NAS) isolates obtained from sheep (n = 125) and humans (n = 70) in Sardinia, Italy, identified at the species level by gap gene polymerase chain reaction (PCR) followed by restriction fragment length polymorphism analysis with AluI. Isolates were tested phenotypically with a disc diffusion method and genotypically by PCR, for resistance to 11 antimicrobial agents including cationic antiseptic agents. Among the ovine isolates, Staphylococcus epidermidis (n = 57), S. chromogenes (n = 29), S. haemolyticus (n = 17), S. simulans (n = 8) and S. caprae (n = 6) were the most prevalent species, while among human isolates, S. haemolyticus (n = 28) and S. epidermidis (n = 26) were predominant, followed by S. lugdunensis and S. hominis (n = 4). Of the 125 ovine isolates, 79 (63.2%) did not carry any of the resistance genes tested, while the remainder carried resistance genes for at least one antibiotic. The highest resistance rates among ovine isolates were recorded against tetracycline (20.8%), and penicillin (15.2%); none was resistant to methicillin and two exhibited multidrug resistance (MDR); one of which was positive for the antiseptic resistance smr gene. By contrast, most human isolates (59/70, 84.3%) were resistant to ⩾1 antimicrobials, and 41 (58.6%) were MDR. All 52 (74.3%) penicillin-resistant isolates possessed the blaZ gene, and 33 of 70 (47.1%) harboured the mec gene; of these, seven were characterised by the Staphylococcal Chromosomal Cassette (SCCmec) type IV, 6 the type V, 5 of type III and one representative each of type I and type II. The majority (57.1%) was erythromycin-resistant and 17 isolates carried only the efflux msrA gene, 11 the methylase ermC gene and an equal number harboured both of the latter genes. Moreover, 23 (32.8%) were tetracycline-resistant and all but one possessed only the efflux tetK gene. qacA/B and smr genes were detected in 27 (38.6%) and 18 (25.7%) human NAS, respectively. These results underline a marked difference in species distribution and antimicrobial resistance between ovine and human-derived NAS.

Information

Type
Original Paper
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution, and reproduction in any medium, provided the original work is properly cited.
Copyright
Copyright © The Author(s), 2021. Published by Cambridge University Press
Figure 0

Fig. 1. RFLP patterns obtained for 15 reference strains after digestion of the gap gene amplicon with AluI. Fragments were separated by 12% PAGE gel. Lane M, marker VIII (Roche); lane 1, S. xylosus ATCC 29971; lane 2, S. saprophyticus ATCC 15305; lane 3, S. capitis ATCC 27840; lane 4, S. haemolyticus ATCC 29970; lane 5, S. simulans ATCC 27848, lane 6, S. warneri ATCC 27836; lane 7, S. arlettae ATCC 43957; lane 8, S. chromogenes ATCC 43764; lane 9, S. equorum ATCC 43958; lane 10, S. hominis ATCC 27844; lane 11, S. caprae ATCC 35538; lane 12, S. lentus ATCC 29070; lane 13, S. hyicus ATCC 11249, lane 14, S. epidermidis ATCC 14990 and lane 14, S. aureus ATCC 43300.

Figure 1

Table 1. Distribution of ovine and human NAS isolates, identified by PCR-RFLP and sequencing analysis of the gap gene, according to the specimen origin

Figure 2

Table 2. Antimicrobial susceptibility results, resistance genes detected and SCCmec typing of both 57 ovine and 26 human S. epidermidis isolates

Figure 3

Table 3. Distribution of sequence types (ST), allelic profiles (MLST) and source of the 57 ovine and 26 human S. epidermidis isolates

Figure 4

Table 4. Antimicrobial susceptibility results, resistance genes detected and SCCmec typing of the 17 ovine and 28 human S. haemolyticus isolates

Figure 5

Table 5. Antimicrobial susceptibility results, resistance genes detected and SCCmec typing of S. chromogenes, S. simulans, S. warneri and S. caprae collected from milk and of 10 minor human NAS isolates