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This page lists the top ten most read articles for this journal based on the number of full text views and downloads recorded on Cambridge Core over the last 90 days. This list is updated on a daily basis.
3-D FOSSILS FOR K–12 EDUCATION: A CASE EXAMPLE USING THE GIANT EXTINCT SHARKCARCHAROCLES MEGALODON
- Claudia A. Grant, Bruce J. MacFadden, Pavlo Antonenko, Victor J. Perez
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- 27 April 2017, pp. 197-209
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Fossils and the science of paleontology provide a charismatic gateway to integrate STEM teaching and learning. With the new Next Generation Science Standards (NGSS), as well as the exponentially increasing use of three-dimensional (3-D) printing and scanning technology, it is a particularly opportune time to integrate a wider variety of fossils and paleontology into K–12 curricula. We describe a curricular prototype that integrates all four components of STEM (Science, Technology, Engineering, Math) into authentic research using dentitions of the Neogene giant shark Megalodon (Carcharocles megalodon Agassiz, 1843). This prototype has been implemented in two middle and two high schools in California and Florida. Consistent with prior evidence-based research, student engagement increases when they have hands-on experiences with fossils, particularly with a charismatic species such as Megalodon. Access to museum specimens helps students understand big ideas in ‘Deep Time.’ In addition to engaging students in authentic STEM practices and scaffolding development of content knowledge, paleontology is an integrative science that connects and informs socially relevant topics, including long-term (macro-) evolution and climate change. The application of 3-D printing and scanning to develop curricula using fossils has immense potential in K–12 schools in the U.S.
Oxygen Isotopes in Foraminifera: Overview and Historical Review
- Paul N. Pearson
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- 21 July 2017, pp. 1-38
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Foraminiferal tests are a common component of many marine sediments. The oxygen isotope ratio (δ18O) of test calcite is frequently used to reconstruct aspects of their life environment. The δ18O depends mainly on the isotope ratio of the water it is precipitated from, the temperature of calcification, and, to a lesser extent, the carbonate ion concentration. Foraminifera and other organisms can potentially preserve their original isotope ratio for many millions of years, although diagenetic processes can alter the ratios. Work on oxygen isotope ratios of foraminifera was instrumental in the discovery of the orbital theory of the ice ages and continues to be widely used in the study of rapid climate change. Compilations of deep sea benthic foraminifer oxygen isotopes have revealed the long history of global climate change over the past 100 million years. Planktonic foraminifer oxygen isotopes are used to investigate the history of past sea surface temperatures, revealing the extent of past ‘greenhouse’ warming and global sea surface temperatures.
A Practical Introduction to Landmark-Based Geometric Morphometrics
- Mark Webster, H. David Sheets
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- 21 July 2017, pp. 163-188
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Landmark-based geometric morphometrics is a powerful approach to quantifying biological shape, shape variation, and covariation of shape with other biotic or abiotic variables or factors. The resulting graphical representations of shape differences are visually appealing and intuitive. This paper serves as an introduction to common exploratory and confirmatory techniques in landmark-based geometric morphometrics. The issues most frequently faced by (paleo)biologists conducting studies of comparative morphology are covered. Acquisition of landmark and semilandmark data is discussed. There are several methods for superimposing landmark configurations, differing in how and in the degree to which among-configuration differences in location, scale, and size are removed. Partial Procrustes superimposition is the most widely used superimposition method and forms the basis for many subsequent operations in geometric morphometrics. Shape variation among superimposed configurations can be visualized as a scatter plot of landmark coordinates, as vectors of landmark displacement, as a thin-plate spline deformation grid, or through a principal components analysis of landmark coordinates or warp scores. The amount of difference in shape between two configurations can be quantified as the partial Procrustes distance; and shape variation within a sample can be quantified as the average partial Procrustes distance from the sample mean. Statistical testing of difference in mean shape between samples using warp scores as variables can be achieved through a standard Hotelling's T2 test, MANOVA, or canonical variates analysis (CVA). A nonparametric equivalent to MANOVA or Goodall's F-test can be used in analysis of Procrustes coordinates or Procrustes distance, respectively. CVA can also be used to determine the confidence with which a priori specimen classification is supported by shape data, and to assign unclassified specimens to pre-defined groups (assuming that the specimen actually belongs in one of the pre-defined groups).
Examples involving Cambrian olenelloid trilobites are used to illustrate how the various techniques work and their practical application to data. Mathematical details of the techniques are provided as supplemental online material. A guide to conducting the analyses in the free Integrated Morphometrics Package software is provided in the appendix.
Are There Transitional Forms in the Fossil Record?
- Kevin Padian, Kenneth D. Angielczyk
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- 21 July 2017, pp. 47-82
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The record of the history of life, as preserved in the fossil record, is not complete for reasons related to erosion and deposition, preservation and sampling bias, and approaches to analysis of the information provided by fossils. Incomplete knowledge is not unique to paleontology; the record of extant humans is no better for many questions of human genealogy. The problem is not that there are no or few transitional fossils; it is rather that, given the incompleteness of the fossil record, it is unreasonable to expect to find transitions of forms rather than transitions of features. The use of cladistic analysis largely overcomes this problem methodologically, but does not itself improve the fossil record. However, when the characters of fossil and living taxa are analyzed cladistically, they can tell us not only the sequence of origination of clades, but also how functional, adaptational, physiological, and behavioral transitions took place. In this way, hypotheses about the origins of major groups and major adaptations can be tested by standard scientific methods. In contrast, notions of the ontology of these groups as explained by “Intelligent Design” are vacuous and untestable.
FOSSIL SECRETS REVEALED: X-RAY CT SCANNING AND APPLICATIONS IN PALEONTOLOGY
- Rachel Racicot
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- 27 April 2017, pp. 21-38
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X-ray computed tomography (CT) provides a nondestructive means of studying the inside and outside of objects. It allows accurate visualization and measurement of internal features, that are otherwise impossible to obtain nondestructively, and is a lasting digital record that can be made available to future researchers, museums, and the general public. Here, an overview of CT scanning methodologies and protocol is provided, as well as some recent examples of how this technology is allowing paleontologists to make new inroads into understanding the ecology, evolution, and development of both extant and extinct organisms. Lastly, some frontiers and outstanding questions in the acquisition, processing, and storage of digital 3-D morphological data are highlighted.
The Use of Mg/Ca as a Seawater Temperature Proxy
- Tim K. Lowenstein, Bärbel Hönisch
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- Published online by Cambridge University Press:
- 21 July 2017, pp. 85-100
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The underlying basis for Mg/Ca paleothermometry is that the amount of magnesium in calcite precipitated from seawater is dependent on temperature. Here we review the state of the art of the Mg/Ca seawater paleotemperature proxy, summarized by the following: 1) Calcite, whether formed abiotically or biologically as foraminifera and ostracode shells, incorporates variable amounts of magnesium into the crystal structure. 2) Uptake of Mg varies positively with temperature. 3) The relationship between temperature and the amount of Mg in calcite has been quantified by experiments on synthetic calcite growth and by culture, core top, and sediment trap experiments using living organisms. 4) The most careful calibrations of the Mg/Ca paleothermometer have been done for planktic foraminifera, then benthic foraminifera; there are species-specific variations in the amount of Mg incorporated into foraminifera shells. 5) The Mg/Ca ratio of calcite from planktic foraminifera in deep-sea cores has been widely used to interpret sea surface temperatures. 6) Measurement of both Mg/Ca and δ18O in planktic foraminifera have been used to calculate δ18O in seawater, and after correction for global ice volume, salinity could be inferred. 7) Mg/Ca from benthic foraminifera have been used to reconstruct deep-sea temperatures and cooling of ~12° over the last 50 million years. 8) One problem with the Mg/Ca seawater temperature proxy is partial dissolution of foraminifer shells, which lowers the Mg/Ca, and leads to an underestimation of ocean temperature. Benthic foraminifers appear to be more resistant to partial dissolution. 9) Past changes in the Mg/Ca ratio of seawater are an important factor in determining the amount of Mg in fossil skeletal calcite, and thus add another variable to the Mg/Ca temperature proxy. All Mg/Ca paleotemperature studies on fossil calcite older than Pleistocene should take into account the Mg/Ca of the seawater from which it precipitated.
Fair Sampling of Taxonomic Richness and Unbiased Estimation of Origination and Extinction Rates
- John Alroy
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- 21 July 2017, pp. 55-80
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Paleobiologists are reaching a consensus that biases in diversity curves, origination rates, and extinction rates need to be removed using statistical estimation methods. Diversity estimates are biased both by methods of counting and by variation in the amount of fossil data. Traditional counts are essentially tallies of age ranges. Because these counts are distorted by interrelated factors such as the Pull of the Recent and the Signor-Lipps effect, counts of taxa actually sampled within intervals should be used instead. Sampling intensity biases can be addressed with randomized subsampling of data records such as individual taxonomic occurrences or entire fossil collections. Fair subsampling would yield taxon counts that track changes in the species pool size, i.e., the diversity of all taxa that could ever be sampled. Most of the literature has overlooked this point, having instead focused on making sample sizes uniform through methods such as rarefaction. These methods flatten the data, undersampling when true diversity is high. A good solution to this problem involves the concept of frequency distribution coverage: a taxon's underlying frequency is said to be “covered” when it is represented by at least one fossil in a data set. A fair subsample, but not a uniform one, can be created by drawing collections until estimated coverage reaches a fixed target (i.e., until a “shareholder quorum” is attained). Origination and extinction rates present other challenges. For many years they were thought of in terms of simple counts or ratios, but they are now treated as exponential decay coefficients of the kind featuring in simple birth-death models. Unfortunately, these instantaneous rates also suffer from counting method biases (e.g., the Pull of the Recent). Such biases can be removed by only examining taxa sampled twice consecutively, three times consecutively, or in the first and third of three intervals but not the second (i.e., two timers, three timers, and part timers). Two similar equations involving these counts can be used. Alternative methods of estimating diversity and turnover through extrapolation share some of the advantages of quorum subsampling and two-timer family equations, but it remains to be shown whether they produce precise and accurate estimates when applied to fossil data.
Introduction to Radiometric Dating
- Brent V. Miller
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- 21 July 2017, pp. 1-23
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Radiometric dating of rocks and minerals to constrain the age of the Earth, timing of geological events and paleobiological histories has its roots in the works of nuclear physicists of the early Nineteenth Century during the period of discovery of radioactivity and investigations into the nature of the atom. The intervening years since have seen great progress in using the long-lived radioactive elements to constrain the origin and evolution of the Earth and to place the rock and fossil record into a consistent, numerically quantifiable temporal framework.
U-Th-Pb and 40Ar/39Ar dating methods have emerged as the primary tools for calibrating most of Earth history. It is important for all geoscientists to appreciate the physical basis underlying these methods and to have the ability to evaluate dates by means of currently accepted practices of data presentation. This introduction, along with the accompanying chapters, is intended to help the consumers of radiometric dates to understand better the uses and limitations of radiometric dating methods in an effort to tailor methods and techniques to address specific geochronologic needs, including calibration of the geologic time scale.
The ultimate goal of a fully calibrated rock record remains an on-going endeavor. The 2004 ICS geologic time scale is the latest compilation of those efforts. The numerical age calibration is constrained by only 213 radiometric dates, the vast majority of which are U-Pb and 40Ar/39Ar dates. Radiometric age control is not evenly distributed through geologic time. There are virtually no radiometric dates in the late Cenozoic where magnetostratigraphy and cyclostratigraphic methods are more precise and applicable. Radiometric dating efforts are concentrated on biostratigraphically important segments of the rock record such as the Permian-Triassic and Cretaceous-Paleocene boundary events, and this is reflected in high-precision calibration of these boundaries. Large segments of geologic time, however, are constrained by either a few radiometric dates per chronostratigraphic unit (most of the Paleozoic) or none at all (Upper Triassic). The current status of radiometric age control on the rock record largely reflects real, underlying scientific issues in biostratigraphy and geochronology, and thus can help point the way to fruitful lines of collaboration between paleontologists, stratigraphers, and geochronologists.
Exceptional Fossil Conservation through Phosphatization
- James D. Schiffbauer, Adam F. Wallace, Jesse Broce, Shuhai Xiao
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- 21 July 2017, pp. 59-82
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This paper addresses the taphonomic processes responsible for fossil preservation in calcium phosphate, or phosphatization. Aside from silicification and rarer examples of carbonaceous compression, phosphatization is the only taphonomic mode claimed to preserve putative subcellular structures. Because this fossilization window can record such valuable information, a comprehensive understanding of its patterns of occurrence and the geochemical processes involved in the replication of soft tissues are critical endeavors. Fossil phosphatization was most abundant during the latest Neoproterozoic through the early Paleozoic, coinciding with the decline of non-pelletal phosphorite deposits. Its temporal abundance during this timeframe makes it a particularly valuable window for the study of early animal evolution. Several occurrences of phosphatization from the Ediacaran through the Permian Period, including Doushantuo-type preservation of embryo-like fossils and acritarchs, phosphatized gut tracts within Burgess Shale-type carbonaceous compressions, Orsten-type preservation of meiofaunas, and other cases from the later Paleozoic are reviewed. In addition, a comprehensive description of the geochemical controls of calcium phosphate precipitation from seawater is provided, with a focus on the rates of phosphate nucleation and growth, favorable nucleation substrates, and properties of substrate tissue and pore-fluid chemistry. It is hoped that the paleontological and geochemical summaries provided here offer a practical and valuable guide to the Neoproterozoic–Paleozoic phosphatization window.