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Microsporidian diversity in the aquatic isopod Asellus aquaticus

Published online by Cambridge University Press:  25 August 2022

Daniel Grabner*
Affiliation:
Aquatic Ecology, University of Duisburg-Essen, Universitätsstraße 5, D-45141 Essen, Germany Centre for Water and Environmental Research, University of Duisburg-Essen, Universitätsstraße 5, D-45141 Essen, Germany
Annemie Doliwa
Affiliation:
Aquatic Ecology, University of Duisburg-Essen, Universitätsstraße 5, D-45141 Essen, Germany
Lidia Sworobowicz
Affiliation:
Department of Evolutionary Genetics and Biosystematics, Faculty of Biology, University of Gdańsk, Wita Stwosza 59, 80-308 Gdańsk, Poland
Anna Wysocka
Affiliation:
Department of Evolutionary Genetics and Biosystematics, Faculty of Biology, University of Gdańsk, Wita Stwosza 59, 80-308 Gdańsk, Poland
Alexander Weigand
Affiliation:
National Museum of Natural History Luxembourg, 25 Rue Munster, 2160 Luxembourg, Luxembourg
Michał Grabowski
Affiliation:
Department of Invertebrate Zoology & Hydrobiology, Faculty of Biology & Environmental Protection, University of Lodz, 90-237 Łódź, Poland
Tomasz Mamos
Affiliation:
Department of Invertebrate Zoology & Hydrobiology, Faculty of Biology & Environmental Protection, University of Lodz, 90-237 Łódź, Poland
Bernd Sures
Affiliation:
Aquatic Ecology, University of Duisburg-Essen, Universitätsstraße 5, D-45141 Essen, Germany Centre for Water and Environmental Research, University of Duisburg-Essen, Universitätsstraße 5, D-45141 Essen, Germany Water Research Group, Unit for Environmental Sciences and Management, North-West University, 11 Hoffman St, Potchefstroom, 2520, South Africa
*
Author for correspondence: Daniel Grabner, E-mail: daniel.grabner@uni-due.de

Abstract

We conducted a molecular survey on microsporidian diversity in different lineages (operational taxonomic units = OTUs) of Asellus aquaticus from 30 sites throughout Europe. Host body length was determined, and DNA was extracted from host tissue excluding the intestine and amplified by microsporidian-specific primers. In total, 247 A. aquaticus specimens were analysed from which 26.7% were PCR-positive for microsporidians, with significantly more infections in larger individuals. Prevalence ranged between 10 and 90%. At 9 sites, no microsporidians were detected. A significant relationship was found between the frequency of infected individuals and habitat type, as well as host OTU. The lowest proportion of infected individuals was detected in spring-habitats (8.7%, n = 46) and the highest in ponds (37.7%, n = 53). Proportion of infected individuals among host OTUs A, D and J was 31.7, 21.7 and 32.1%, respectively. No infections were detected in OTU F. Our results are, however, accompanied by a partially low sample size, as only a minimum of 5 individuals was available at a few locations. Overall, 17 different microsporidian molecular taxonomic units (MICMOTUs) were distinguished with 5 abundant isolates (found in 4–17 host individuals) while the remaining 12 MICMOTUs were “rare” and found only in 1–3 host individuals. No obvious spatio-genetic pattern could be observed. The MICMOTUs predominantly belonged to Nosematida and Enterocytozoonida. The present study shows that microsporidians in A. aquaticus are abundant and diverse but do not show obvious patterns related to host genetic lineages or geography.

Information

Type
Research Article
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
Copyright © The Author(s), 2022. Published by Cambridge University Press
Figure 0

Table 1. Details on sampling location and microsporidian prevalence per site in Asellus aquaticus hosts.

Figure 1

Table 2. Number of Asellus aquaticus hosts and proportion of individuals infected by microsporidians for each habitat type

Figure 2

Table 3. Number of Asellus aquaticus hosts and proportion of individuals infected by microsporidians in each host OTU

Figure 3

Fig. 1. Size dependence of positive (n = 66) and negative (n = 181) results of the microsporidian PCR. Asterisks indicate significant difference (P < 0.05).

Figure 4

Fig. 2. Map showing the sampling locations and pie-charts showing the prevalence of the respective microsporidian MOTUs (MICMOTU) at each site. At sites indicated with white dots, no infections were found. Red dots indicate sites where infected Asellus aquaticus were detected. Numbers in pies indicate the respective MICMOTU. UI, uninfected, ND, not determined (PCR positive but sequence was too short or of poor quality). Greyscale fill indicates MICMOTUs that were detected only in a single host individual. Please note the uncertainty of prevalence values given due to low sample size.

Figure 5

Fig. 3. Maximum likelihood phylogenetic tree reconstruction with 307 ultrafast bootstrap iterations of the microsporidian MOTUs (MICMOTUs) detected in Asellus aquaticus (in bold) including microsporidian sequences representing the recent microsporidian taxonomy sensu Bojko et al. (2022). Substitution model was GTR + F + R5. Amphiamblys sp. (KX214674) and Chytridiopsis typographi (MH728789) were used as outgroups. GenBank accession numbers are shown in brackets and the host group/sample type for each sequence isolate is indicated. Branches that did not contain microsporidians from A. aquaticus were collapsed to make the tree clearer. The same tree with branches not collapsed can be seen in Supplementary file 3.

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