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Nutritional developmental epigenomics: immediate and long-lasting effects

Published online by Cambridge University Press:  05 March 2010

L. Attig
Affiliation:
Biologie du Développement et Reproduction, UMR INRA-ENVA-CNRS 1198 BDR, Domaine de Vilvert, Bâtiment 231, F-78352 Jouy-en-Josas, France
A. Gabory
Affiliation:
Biologie du Développement et Reproduction, UMR INRA-ENVA-CNRS 1198 BDR, Domaine de Vilvert, Bâtiment 231, F-78352 Jouy-en-Josas, France
C. Junien*
Affiliation:
Biologie du Développement et Reproduction, UMR INRA-ENVA-CNRS 1198 BDR, Domaine de Vilvert, Bâtiment 231, F-78352 Jouy-en-Josas, France
*
*Corresponding author: Professor Claudine Junien, fax +33 1 34 65 23 64, email claudine.junien@jouy.inra.fr
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Abstract

The phenotype of an individual is the result of complex interactions between genome, epigenome and current, past and ancestral environment leading to a lifelong remodelling of the epigenomes. The genetic information expression contained in the genome is controlled by labile chromatin-associated epigenetic marks. Epigenetic misprogramming during development is widely thought to have a persistent effect on the health of the offspring and may even be transmitted to the next generation. The epigenome serves as an interface between the environment and the genome. Dietary factors, including folate involved in C1 metabolism, and other social and lifestyle exposures have a profound effect on many aspects of health including ageing and do so, at least partly, through interactions with the genome, which result in altered gene expression with consequences for cell function and health throughout the life course. Depending on the nature and intensity of the environmental insult, the critical spatiotemporal windows and developmental or lifelong processes involved, epigenetic alterations can lead to permanent changes in tissue and organ structure and function or to phenotypic changes that can (or cannot) be reversed using appropriate epigenetic tools. Moreover, the flexibility of epigenetic marks may make it possible for environmental, nutritional and hormonal factors or endocrine disruptors to alter, during a particular spatiotemporal window in a sex-specific manner, the sex-specific methylation or demethylation of specific CpG and/or histone modifications underlying sex-specific expression of a substantial proportion of genes. Moreover, genetic factors, the environment and stochastic events change the epigenetic landscape during the lifetime of an individual. Epigenetic alterations leading to gene expression dysregulation accumulate during ageing and are important in tumorigenesis and age-related diseases. Several encouraging trials suggest that prevention and therapy of age- and lifestyle-related diseases by individualised tailoring to optimal epigenetic diets or drugs are conceivable. However, these interventions will require intense efforts to unravel the complexity of these epigenetic, genetic and environment interactions and to evaluate their potential reversibility with minimal side effects.

Information

Type
Conference on ‘Over- and undernutrition: challenges and approaches’
Copyright
Copyright © The Authors 2010
Figure 0

Fig. 1. Sexual dimorphism in the modes of transmission and in the effects on the offspring in successive generations: The sex specificity of these effects operates at different levels: (1) the maternal transmission during pregnancy and postnatal periods; (2) the sex of the parent transmitting the consequences of stimulus exposure via the germline; (3) the sex of the offspring displaying the maternal effect or paternal and/or maternal germline trans-generational effects. (From Gabory et al.(58); reproduced with permission.)

Figure 1

Fig. 2. Mechanistic pathways for environmental factors involved in epigenetic reprogramming. There are three ways to link environmental factors such as nutrients or drugs from the cell membrane to the chromatin structure: (1) activation or inhibition of the chromatin epigenetic machinery by metabolites of these substrates; (2) activation of nuclear receptor by ligands; (3) traditional membrane receptor signalling cascade. DNMT, DNA methyltransferase; HMT, histone methyltransferase; HDAC, histone deacetylase. (From Gabory et al.(58); reproduced with permission.)

Figure 2

Fig. 3. Sex chromosomes consist of a non-automosal pair of which one is inherited from the mother () and the other from the father (). In the male (A) the pair is composed of an X and a Y. In the female (B) there are two X, one of which is randomly inactivated (▪), leading to two distinct cell populations. A small region is homologous between X and Y: the PAR (□). Different classes of genes may be expressed in a sexually dimorphic manner: Y-specific genes (); genes that escape X inactivation and have a functionally different homologue on the Y (, ); maternally (mat)-expressed imprinted genes subject to X-inactivation (); paternally (pat)-expressed imprinted genes subject to inactivation or escaping inactivation () and respectively). Other genes may be expressed equally in the male and the female: PAR genes (); genes subject to X inactivation (); maternally-expressed imprinted genes that escape inactivation (). (From Davies & Wilkinson(91); reproduced with permission.)