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Dietary zinc restriction affects the expression of genes related to immunity and stress response in the small intestine of pigs

Published online by Cambridge University Press:  22 November 2022

Ramya Lekha Medida
Affiliation:
Department of Animal Science, University of Minnesota, 1988 Fitch Ave., 495K AS/VM, Saint Paul, MN 55108, USA
Ashok Kumar Sharma
Affiliation:
Department of Animal Science, University of Minnesota, 1988 Fitch Ave., 495K AS/VM, Saint Paul, MN 55108, USA
Yue Guo
Affiliation:
Department of Animal Science, University of Minnesota, 1988 Fitch Ave., 495K AS/VM, Saint Paul, MN 55108, USA
Lee Johnston
Affiliation:
West Central Research and Outreach Center (WCROC), University of Minnesota, Morris, MN, USA
Pedro E. Urriola
Affiliation:
Department of Animal Science, University of Minnesota, 1988 Fitch Ave., 495K AS/VM, Saint Paul, MN 55108, USA
Andres Gomez
Affiliation:
Department of Animal Science, University of Minnesota, 1988 Fitch Ave., 495K AS/VM, Saint Paul, MN 55108, USA
Milena Saqui-Salces*
Affiliation:
Department of Animal Science, University of Minnesota, 1988 Fitch Ave., 495K AS/VM, Saint Paul, MN 55108, USA
*
*Corresponding author: Milena Saqui-Salces, email msaquisa@umn.edu

Abstract

Zinc (Zn) is an essential mineral and its deficiency manifests in non-specific clinical signs that require long time to develop. The response of swine intestine to Zn restriction was evaluated to identify early changes that can be indicative of Zn deficiency. Twenty-seven pigs (body weight = 77⋅5 ± 2⋅5 kg) were assigned to one of three diets: diet without added Zn (Zn-restricted diet, ZnR), and ZnR-supplemented with either 50 (Zn50) or 100 mg of Zn/kg of diet (Zn100) of Zn supplied by ZnCl2. After 32 d consuming the diets, serum Zn concentration in ZnR pigs was below the range of 0⋅59–1⋅37 μg/ml considered sufficient, thereby confirming subclinical Zn deficiency. Pigs showed no obvious health or growth changes. RNA-seq analysis followed by qPCR showed decreased expression of metallothionein-1 (MT1) (P < 0⋅05) and increased expression of Zn transporter ZIP4 (P < 0⋅05) in jejunum and ileum of ZnR pigs compared with Zn-supplemented pigs. Ingenuity pathway analysis revealed that Zn50 and Zn100 induced changes in genes related to nucleotide excision repair and integrin signalling pathways. The top gene network in the ZnR group compared with Zn100 was related to lipid and drug metabolism; and compared with Zn50, was related to cellular proliferation, assembly and organisation. Dietary Zn concentrations resulted in differences in genes related to immune pathways. Our analysis showed that small intestine presents changes associated with Zn deficiency after 32 d of Zn restriction, suggesting that the intestine could be a sentinel organ for Zn deficiency.

Information

Type
Research Article
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
Copyright © The Author(s), 2022. Published by Cambridge University Press on behalf of The Nutrition Society
Figure 0

Table 1. Ingredient and nutrient composition of the basal diet (as fed basis)a

Figure 1

Table 2. Composition of the Zn-free vitamin and trace minerala premix

Figure 2

Table 3. Primer sequences used for gene expression analysis in swine intestine

Figure 3

Table 4. Measured Zn concentrations in experimental diets (as fed basis)

Figure 4

Fig. 1. Serum Zn concentration of pigs fed Zn-restricted diets (ZnR), or diets supplemented with 50 and 100 mg of Zn/kg of diet from ZnCl2 (Zn50 and Zn100, respectively). Data are presented as means ± sem. ****P ≤ 0⋅0001. n 9 for all groups.

Figure 5

Table 5. Number of differentially expressed genes

Figure 6

Table 6. Expression changes of Zinc transporter genes

Figure 7

Fig. 2. Gene expression in intestinal samples evaluated by qPCR. (a) ZIP4 and (b) MT1 expression in jejunum. (c) ZIP4 and (d) MT1 gene expression in ileum of pigs fed Zn-restricted diets (ZnR) or diets supplemented with 50 and 100 mg of Zn/kg of diet from ZnCl2 (Zn50 and Zn100, respectively) for 32 d. Data are presented as means ± sem. *P ≤ 0⋅05, **P ≤ 0⋅01. In jejunum samples, n 9 for all groups. In ileum samples, n 7 for ZnR, n 8 for Zn100 and Zn50.

Figure 8

Fig. 3. Top three up-regulated and down-regulated pathways identified through ingenuity pathway analysis of differentially expressed genes in ileum of pigs fed Zn-restricted diets (ZnR) compared with pigs fed diets supplemented with 50 and 100 mg of Zn/kg of diet from ZnCl2 (Zn50 (a) and Zn100 (b), respectively). z-score >2 or <−2 were considered significantly up-regulated (black bars) or down-regulated (grey bars), respectively. n 7 for ZnR, n 8 for Zn100 and Zn50.

Figure 9

Fig. 4. Top functional network identified in ileum of pigs fed zinc-restricted (ZnR) diet compared with those fed diets supplemented with (a) 50 mg of Zn/kg of diet from ZnCl2 (Zn50) includes functions related to cellular assembly and organisation, and cell morphology. When compared with those of pigs fed diet supplemented with (b) 100 mg of Zn/kg of diet from ZnCl2 (Zn100), top network includes functions related to lipid metabolism and drug metabolism. Genes are denoted as nodes. Node colour indicates up- (red) and down- (green) regulated genes. Edges (lines and arrows between nodes) represent direct (solid lines) and indirect (dashed lines) interactions between molecules as supported by information in the Ingenuity knowledge base. n 7 for ZnR, n 8 for Zn50 and Zn100.

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