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Using occupancy-based camera-trap surveys to assess the Critically Endangered primate Macaca nigra across its range in North Sulawesi, Indonesia

Published online by Cambridge University Press:  29 September 2020

Caspian L. Johnson*
Affiliation:
Selamatkan Yaki Foundation, Manado, Indonesia
Harry Hilser
Affiliation:
Selamatkan Yaki Foundation, Manado, Indonesia
Matthew Linkie
Affiliation:
Wildlife Conservation Society, Bogor, Indonesia
Rivo Rahasia
Affiliation:
Natural Resource Conservation Agency, North Sulawesi, Indonesia
Francesco Rovero
Affiliation:
Tropical Biodiversity Section, Museo delle Scienze, Trento, Italy
Wulan Pusparini
Affiliation:
Wildlife Conservation Society, Bogor, Indonesia
Iwan Hunowu
Affiliation:
Wildlife Conservation Society, Bogor, Indonesia
Alfons Patandung
Affiliation:
Wildlife Conservation Society, Bogor, Indonesia
Noviar Andayani
Affiliation:
Wildlife Conservation Society, Bogor, Indonesia
John Tasirin
Affiliation:
University of Sam Ratulangi, Manado, Indonesia
Lukita A. Nistyantara
Affiliation:
Nani Wartabone National Park
Andrew E. Bowkett
Affiliation:
Whitley Wildlife Conservation Trust, Paignton, UK
*
(Corresponding author) E-mail caspianjohnson@gmail.com

Abstract

Primates are one of the most threatened groups of mammals. Understanding their patterns of population occurrence and abundance, especially in response to threats, is critical for informing conservation action. The crested black macaque Macaca nigra is the only Critically Endangered species of Sulawesi's seven endemic macaques. Little is known about its distribution or its response to deforestation and hunting. We conducted a camera-trap survey across the entire species range using an occupancy-based analytical approach to (1) establish the first range-wide baseline of occurrence, (2) investigate how environmental and anthropogenic factors influence occurrence, (3) identify priority conservation subpopulations, and (4) test the efficacy of the sampling and analytical protocol for temporal monitoring of M. nigra using occupancy as the state variable. From 9,753 camera-trap days, M. nigra was detected on 473 days at 77 of the 111 camera locations. Species occupancy was 0.66 and highest inside protected areas and closed canopy forest. We identified eight distinct subpopulations, based on distribution and forest fragment size. To inform future monitoring, we used a power analysis to determine if our effort would allow us to detect inter-annual occupancy declines of 10%, and found that 90 camera locations surveyed for 3 months (8,100 camera days) across three consecutive seasons is the effort required to detect such change with 80% certainty. Our study underscores the importance of well-managed protected areas and intact forests for the long-term survival of the crested black macaque, and tests the effectiveness of camera traps to monitor primates at the landscape scale.

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Article
Copyright
Copyright © The Author(s), 2020. Published by Cambridge University Press on behalf of Fauna & Flora International
Figure 0

Fig. 1 Camera-trap placements across North Sulawesi province in relation to protected and unprotected areas and the main habitat types. The line represents the boundary between Macaca nigra and Macaca nigrescens (Johnson et al., 2019).

Figure 1

Table 1 Definition and predicted effect of covariates used to model variation in detectability and occupancy of Macaca nigra across sites.

Figure 2

Fig. 2 The functional relationships of predicted occupancy, with standard error, of M. nigra, with covariates included, in the best-fit models (Table 3): (a) protective area status, (b) forest cover (bush/scrub or closed canopy forest), (c) Euclidean distance from forest edge (negative values for cameras in non-forested habitat), and (d) Normalized Difference Vegetation Index (NDVI).

Figure 3

Fig. 3 Predicted occupancy across the mainland native range of M. nigra. Eight potentially important landscapes, defined as spatially distinct continuous forest blocks > 50 km2 with predicted occupancy > 0.7, are identified by numbers (Supplementary Fig. 2, Supplementary Table 3).

Figure 4

Table 2 Model selection results for covariate effects in determining occupancy probability of M. nigra across its native range in North Sulawesi. The top ranked models are shown as those with ΔAIC c < 3 followed by the null and average model. All models depicted (ΔAICc < 2) were included in the averaged model.

Figure 5

Table 3 Summary of conditional model averaged parameters based on the best-supported models identified in Table 2. Estimates of the β coefficient are reported for standardized covariates (scaled to mean = 0 and unit variance of 2). See Table 2 for the models with covariates for both ψ and p.

Figure 6

Fig. 4 Total survey effort required (sites × repeats) (a), and total number of unique camera sites required (b) to achieve a given precision in the occupancy estimate as a function of the number of repeats required per camera. Repeats are represented by months; a single repetition has a duration of 5 days and 1 month is therefore six repeats. Curves were created based on the averaged model (p = 0.28 and ψ = 0.66) and on the asymptotic properties of the maximum likelihood estimates. The curves correspond to different standard errors in the occupancy estimate.

Supplementary material: PDF

Johnson et al. supplementary material

Tables S1-S4 and Figures S1-S2

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