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Hidden in plain sight: novel molecular data reveal unexpected genetic diversity among paramphistome parasites (Digenea: Paramphistomoidea) of European water frogs

Published online by Cambridge University Press:  17 June 2022

Michal Benovics*
Affiliation:
Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, 611 37 Brno, Czech Republic Department of Zoology, Faculty of Natural Sciences, Comenius University in Bratislava, Ilkovičova 6, 842 15 Bratislava, Slovakia
Peter Mikulíček
Affiliation:
Department of Zoology, Faculty of Natural Sciences, Comenius University in Bratislava, Ilkovičova 6, 842 15 Bratislava, Slovakia
Zuzana Žákovicová
Affiliation:
Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, 611 37 Brno, Czech Republic
Petr Papežík
Affiliation:
Department of Zoology, Faculty of Natural Sciences, Comenius University in Bratislava, Ilkovičova 6, 842 15 Bratislava, Slovakia
Camila Pantoja
Affiliation:
Institute of Ecology, Nature Research Centre, Akademijos 2, 08412 Vilnius, Lithuania; Institute of Parasitology, Biology Centre of the Czech Academy of Sciences, Branišovská 31, 370 05 České Budějovice, Czech Republic
*
Author for correspondence: Michal Benovics, E-mail: benovics@mail.muni.cz

Abstract

Parasites might represent a helpful tool in understanding the historical dispersion and phylogeography of their hosts. In order to reveal whether the migration routes and diversification of hosts can be traceable in the genetic structures of their parasites, we investigated the diversity of paramphistomoid trematodes of Pelophylax frogs in 2 geographically distant European regions. Water frogs belonging to the genus Pelophylax represent a striking example of a species with a high variety of ecological adaptations and a rich evolutionary history. The parasites were collected from 2 Balkan endemic species, P. epeiroticus and P. kurtmuelleri, and 2 species in Slovakia, P. esculentus and P. ridibundus. While in Slovakia, Pelophylax frogs harboured 2 species, the diplodiscid Diplodiscus subclavatus and the cladorchiid Opisthodiscus diplodiscoides, only the former was recorded in the south-western Balkans. Remarkably high genetic diversity (16 unique mitochondrial cox1 haplotypes, recognized among 60 novel sequences) was observed in D. subclavatus, and subsequent phylogenetic analyses revealed a strong population-genetic structure associated with geographical distribution. We also evidenced the existence of 2 divergent D. subclavatus cox1 haplogroups in the south-western Balkans, which might be associated with the historical diversification of endemic water frogs in the regional glacial microrefugia.

Information

Type
Research Article
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
Copyright © The Author(s), 2022. Published by Cambridge University Press
Figure 0

Fig. 1. Map showing the collection sites in Slovakia and the Balkans. A, the collection sites in the Slovakia; B, the collection sites in the Balkans; C, map of the Europe. The same scale bar is applicable for parts A and B. The same colouration palette of the collection site points is used for the sites in the subsequent figures.

Figure 1

Table 1. Quantitative descriptors of the populations of collected paramphistomes calculated for each metapopulation

Figure 2

Fig. 2. Phylogenetic tree of 25 28S sequences of 9 Paramphistomoidea species reconstructed by Bayesian inference. The tree is based on 810 bp-long sequences and rooted using Carmyerius spatiosus, Gastrothylax crumenifer, Fischoederius elongatus and Paramphistomum cervi as the outgroup. Values at the nodes indicate posterior probabilities (>70) from the Bayesian inference, and bootstrap values (>50) from the maximum likelihood analysis. Lower values are shown as dashes (–). The length of branches represents the number of substitutions per site. The silhouettes at the taxa with coloured background represent common hosts of the respective trematode species – frogs. The new sequences generated from this study are in red.

Figure 3

Fig. 3. Phylogenetic tree of 61 cox1 sequences of 3 Paramphistomoidea species reconstructed by Bayesian inference. The tree is based on 683 bp-long sequences and rooted using Zygocotyle lunata as the outgroup. Values at the nodes indicate posterior probabilities (>70) from the Bayesian inference, and bootstrap values (>50) from the maximum likelihood analysis. Lower values are shown as dashes (–). The length of branches represents the number of substitutions per site. The numbers and letters in the squares represent clades and lineages further discussed in the Results section. The new sequences generated from this study are shown in colour: red – Opisthodiscus diplodiscoides; blue – Diplodiscus subclavatus.

Figure 4

Table 2. A list of sequenced Diplodiscus subclavatus and Opisthodiscus diplodiscoides individuals with respective hosts and collection sites

Figure 5

Fig. 4. Population-genetic structure of Opisthodiscus diplodiscoides found in Slovak populations of water frogs, based on cox1 haplotypes presented as a median-joining haplotype network. The sizes of the circles in the network are proportional to the relative frequencies of the haplotypes; small black circles represent missing haplotypes. The vertical lines represent the number of substitutions between individual haplotypes. Different colours represent sample sites according to the legend.

Figure 6

Fig. 5. Population-genetic structure of Diplodiscus subclavatus based on cox1 haplotypes presented as a median-joining haplotype network. The sizes of the circles in the network are proportional to the relative frequencies of the haplotypes; small black circles represent missing haplotypes. Different colours represent sample sites according to the legend. The vertical lines represent the number of substitutions between individual haplotypes. The abbreviations in the legend represent countries where the collection site was situated: AL, Albania; GR, Greece; SK, Slovakia.