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Isothermal recombinase polymerase amplification based diagnostics for female genital schistosomiasis and human papillomavirus: a review of combined molecular diagnostic opportunities

Published online by Cambridge University Press:  25 November 2025

Lucy Isabelle Smith*
Affiliation:
Clinical Research Department, London School of Hygiene and Tropical Medicine, London, UK Department of Medicine, City St George’s University of London, London, UK Department of Science, Natural History Museum, London, UK
Sanjeev Krishna
Affiliation:
Department of Medicine, City St George’s University of London, London, UK Institut für Tropenmedizin, Universitätsklinikum Tübingen, Tübingen, Germany
Helen Kelly
Affiliation:
Clinical Research Department, London School of Hygiene and Tropical Medicine, London, UK School of Public Health, Physiotherapy and Sports Science, University College Dublin, Dublin, Ireland
Amaya Bustinduy
Affiliation:
Clinical Research Department, London School of Hygiene and Tropical Medicine, London, UK
Bonnie Webster
Affiliation:
Department of Science, Natural History Museum, London, UK
*
Corresponding author: Lucy Isabelle Smith; Email: Lucy.Smith1@lshtm.ac.uk

Abstract

Women in sub-Saharan Africa face complex, multifaceted challenges to their health, including a high burden of infectious diseases aggravated by socioeconomic factors. Parasitic and sexually transmitted infections both cause significant morbidity and mortality. Co-infections compound these effects, leading to high rates of chronic illness and making diagnosis and treatment challenging. There are no integrated approaches for the detection of female genital schistosomiasis (FGS), a gynaecological condition caused by Schistosoma haematobium, and high-risk human papillomavirus (HR-HPV), responsible for over 90% of all cervical cancer cases worldwide. FGS is a chronic condition with health outcomes such as infertility and abortion and remains severely under-reported. HR-HPV infection is the main aetiological agent of cervical cancer, the leading cause of cancer death in women in sub-Saharan Africa. Both can be disabling and stigmatizing to the sufferer. A key to disease management at patient and community levels is accurate and available diagnostics. Due to both FGS and HPV diagnostics utilising cervicovaginal samples, they are ideal candidates for a multiplex molecular diagnostic. The standard molecular diagnostics (namely PCR), through the detection of pathogen DNA, are constrained in low resource settings by requirement of a highly reliable source of energy, reliance on a cold-chain, and prohibitive costs. Isothermal molecular diagnostics are an alternative method to PCR that are more suited to basic settings. This review explores current isothermal diagnostics, with a focus on RPA/RAA, a very simple isothermal technology, for FGS and HPV and proposes the development of a multiplex isothermal diagnostic test to enable integrated screening.

Information

Type
Review Article
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
© The Author(s), 2025. Published by Cambridge University Press.
Figure 0

Figure 1. Colposcopy images of characteristic FGS pathology, including (A) Grainy sandy patches; (B) Homogenous yellow patches; (C) Rubbery papules; (D) Abnormal blood vessels; and (E) Severe contact bleeding (Figure adapted from UNAIDS, 2019).

Figure 1

Table 1. Over 200 types of HPV have been characterized, 40 of which are associated with genital tract infections. Fourteen are classified as high-risk as persistent infections can lead to cervical cancer, while other low-risk types are associated with genital warts

Figure 2

Figure 2. Cervixes with progressively advanced stages of cervical intraepithelial neoplasia (CIN), associated with HR-HPV and the precursor to cervical cancer. The blue ring highlights where pathology is concentrated. (A) CIN 1; (B) CIN 2; and (C) CIN 3. (Figure adapted from Sellor. JW and Sankaranarayanan. R, Colposcopy and Treatment of Cervical Intraepithelial Neoplasia: A Beginner’s Manual, Sellors, 2003).

Figure 3

Figure 3. Structure of the HPV genome (figure taken from D’Abramo and Archambault, 2011). The L1 and L2 genes encode for the major and minor capsid proteins respectively. The E6 and E7 genes are oncoproteins.

Figure 4

Table 2. Widely used molecular targets in HPV diagnostic assays

Figure 5

Table 3. Published Recombinase Polymerase Amplification/Recombinase Aided Amplification assays for the detection of S. Haematobium (S.H) for the diagnosis of urinary and female genital schistosomiasis

Figure 6

Table 4. Published Recombinase Polymerase Amplification/Recombinase Aided Amplification assays for high-risk human papillomavirus with the purpose of risk assessment for cervical cancer. Adapted from (Ying et al., 2023)