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Derivation and simulation of a two-phase fluid deformable surface model

Published online by Cambridge University Press:  21 December 2023

Elena Bachini*
Affiliation:
Institute of Scientific Computing, TU Dresden, Germany
Veit Krause
Affiliation:
Institute of Scientific Computing, TU Dresden, Germany
Ingo Nitschke
Affiliation:
Institute of Scientific Computing, TU Dresden, Germany
Axel Voigt*
Affiliation:
Institute of Scientific Computing, TU Dresden, Germany Center for System Biology Dresden, Germany Cluster of Excellence, Physics of Life, TU Dresden, Germany
*
Present address: Department of Mathematics ‘Tullio Levi-Civita’, University of Padua, Italy.
Email address for correspondence: axel.voigt@tu-dresden.de

Abstract

To explore the impact of surface viscosity on coexisting fluid domains in biomembranes we consider two-phase fluid deformable surfaces as model systems for biomembranes. Such surfaces are modelled by incompressible surface Navier–Stokes–Cahn–Hilliard-like equations with bending forces. We derive this model using the Lagrange–d’Alembert principle considering various dissipation mechanisms. The highly nonlinear model is solved numerically to explore the tight interplay between surface evolution, surface phase composition, surface curvature and surface hydrodynamics. It is demonstrated that hydrodynamics can enhance bulging and furrow formation, which both can further develop to pinch-offs. The numerical approach builds on a Taylor–Hood element for the surface Navier–Stokes part, a semi-implicit approach for the Cahn–Hilliard part, higher-order surface parametrizations, appropriate approximations of the geometric quantities, and mesh redistribution. We demonstrate convergence properties that are known to be optimal for simplified subproblems.

Information

Type
JFM Papers
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
© The Author(s), 2023. Published by Cambridge University Press.
Figure 0

Figure 1. Convergence study for two-phase fluid deformable surfaces with respect to the mesh size $h^3 \sim \tau$ for $\boldsymbol {X}_h,{\boldsymbol {\boldsymbol {u}}}_h,\phi _h$ (ac); and error for area $A$, divergence ${\rm div}_{\boldsymbol {P}} \boldsymbol {u}_h$ and total energy ${\mathcal {F}}_K + {\mathcal {F}}$ (df).

Figure 1

Figure 2. (a,b) Snapshots of the relaxation of the two-component fluid deformable surface with random initial condition $\phi _1$ and $Re=1.0$ for $t=0,0.3,0.8,1.1$ (from left to right), with constant bending stiffness $\kappa _1 = \kappa _2 = \kappa =0.02$ in (a) and phase-depended bending stiffness $\kappa _1 = 0.02$ and $\kappa _2 = 0.5$ in (b). In (b) the red coloured phase is less stiff than the blue coloured phase. Here, in each of (a,b), is shown the (top) phase field $\phi$; (bottom) tangential velocity ${\boldsymbol {P}}{\boldsymbol {\boldsymbol {u}}}$. The flow is visualized by a LIC (Line Integral Convolution) filter and colour coding represents the magnitude. Corresponding movies are provided in the Supplementary data available at https://doi.org/10.1017/jfm.2023.943.

Figure 2

Figure 3. (a,b) The energies ${{\mathcal {F}}_{K}}$, ${{\mathcal {F}}_{GL}}$, ${\mathcal {F}}_{H}$ and ${\mathcal {F}}_K+{\mathcal {F}}$ over time where (a) corresponds to figure 2(a) and (b) corresponds to figure 2(b). The time instances are highlighted in the plots. (c) Averaged mean curvature $\bar {{\mathcal {H}}}_{1,2}$ for the different phases with respect to the simulations done in figure 2(a,b), the colour corresponds to the coloured phases.

Figure 3

Figure 4. Final configuration obtained for different parameters and initial condition $\phi _0$. Either the simulation reaches the equilibrium configuration or the criteria for a potential pinch-off is reached. The corresponding critical times $T$ are shown in table 1.

Figure 4

Figure 5. Final configuration obtained for different parameters and initial condition $\phi _1$. Either the simulation reaches the equilibrium configuration or the criteria for a potential pinch-off is reached. The corresponding critical times $T$ are shown in table 1.

Figure 5

Table 1. Critical times $T$ for the different Reynolds numbers $Re$ and bending stiffness $\kappa$ for the symmetric initial value $\phi _0$ in (a) and the random initial value $\phi _1$ in (b).

Figure 6

Figure 6. (a) Snapshots of the relaxation of the two-component elastic surface (without hydrodynamics) (D12), with random initial condition $\phi _1$ for $t=0,0.3,0.8,1.1$, with constant bending stiffness $\kappa _1 = \kappa _2 = \kappa =0.02$ and ${\mathcal {H}}_0 = 0$. The phase field $\phi$ is visualized. The time instances correspond to the simulation of the full model shown in figure 2(a). (b) Reached equilibrium configuration for the same configuration as in (a) but with $\kappa =0.5$. (c) Energy over time for the Ginsburg–Landau energy ${{\mathcal {F}}_{GL}}$, the Helfrich energy ${\mathcal {F}}_{H}$ and total energy ${\mathcal {F}}_T$, corresponding to (a). The black dashed line shows the total energy of the simulation in figure 2(a) for comparison.

Figure 7

Figure 7. Snapshots of the relaxation of the two-component fluid deformable surface with random initial condition $\phi _1$ and $Re=1.0$ for $t=0,0.3,0.8,1.1$ (from left to right), with constant bending stiffness $\kappa _1 = \kappa _2 = \kappa =0.02$ and ${\mathcal {H}}_0 = \gamma = 0$. (a) Semi-implicit Euler scheme (identical with figure 2a). (b,c) Corresponding results for the fully implicit iterative Euler scheme for two different time steps $\tau$. (a) Semi-implicit Euler scheme $\tau = 0.005$, (b) iterative Euler scheme $\tau = 0.005$ and (c) iterative Euler scheme $\tau= 0.02$.

Supplementary material: File

Bachini et al. supplementary movie 1

Corresponding movie to Figure 2 (a) showing the relaxation of the two-component fluid deformable surface with random initial condition ϕ1 and Re = 1.0 with constant bending stiffness κ1 = κ2 = κ = 0.02. Tangential velocity Pu. The flow is visualized by a LIC filter and color coding represents the magnitude.
Download Bachini et al. supplementary movie 1(File)
File 608.1 KB
Supplementary material: File

Bachini et al. supplementary movie 2

Corresponding movie to Figure 2 (a) showing the relaxation of the two-component fluid deformable surface with random initial condition ϕ1 and Re = 1.0 with constant bending stiffness κ1 = κ2 = κ = 0.02. Phase field ϕ.
Download Bachini et al. supplementary movie 2(File)
File 235.3 KB
Supplementary material: File

Bachini et al. supplementary movie 3

Corresponding movie to Figure 2 (b) showing the relaxation of the two-component fluid deformable surface with random initial condition ϕ1 and Re = 1.0 with phase-depended bending stiffness κ1 = 0.02 and κ2 = 0.5. Tangential velocity Pu. The flow is visualized by a LIC filter and color coding represents the magnitude.
Download Bachini et al. supplementary movie 3(File)
File 727.2 KB
Supplementary material: File

Bachini et al. supplementary movie 4

Corresponding movie to Figure 2 (b) showing the relaxation of the two-component fluid deformable surface with random initial condition ϕ1 and Re = 1.0 with phase-depended bending stiffness κ1 = 0.02 and κ2 = 0.5, the red colored phase is less stiff than the blue colored phase. Phase field ϕ.
Download Bachini et al. supplementary movie 4(File)
File 265.2 KB