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Species detection framework using automated recording units: a case study of the Critically Endangered Jerdon's courser

Published online by Cambridge University Press:  29 June 2022

Chiti Arvind*
Affiliation:
Indian Institute of Science Education and Research Tirupati, Tirupati- 517507, Andhra Pradesh, India
Viral Joshi
Affiliation:
Indian Institute of Science Education and Research Tirupati, Tirupati- 517507, Andhra Pradesh, India
Russell Charif
Affiliation:
K. Lisa Yang Center for Conservation Bioacoustics, Cornell Lab of Ornithology, Cornell University, Ithaca, USA
Panchapakesan Jeganathan
Affiliation:
Nature Conservation Foundation, Mysuru, India
V. V. Robin*
Affiliation:
Indian Institute of Science Education and Research Tirupati, Tirupati- 517507, Andhra Pradesh, India
*
(Corresponding author, robin@iisertirupati.ac.in)

Abstract

With the advent of automated recording units, bioacoustic monitoring has become a popular tool for the collection of long-term data across extensive landscapes. Such methods involve two main components: hardware for audio data acquisition and software for analysis. In the acoustic monitoring of threatened species, a species-specific framework is often essential. Jerdon's courser Rhinoptilus bitorquatus is a Critically Endangered nocturnal bird endemic to a small region of the Eastern Ghats of India, last reported in 2008. Here we describe a reproducible and scalable acoustic detection framework for the species, comparing several commonly available hardware and detection methods and using existing software. We tested this protocol by collecting 24,349 h of data during 5 months. We analysed the data with two commercially available sound analysis programmes, following an analysis pipeline created for this species. Although we did not detect vocalizations of Jerdon's courser, this study provides a framework using a combination of hardware and software for future research that other conservation practitioners can implement. Vocal mimicry can aid or confound in detection and we highlight the potential role of mimicry in the detection of such threatened species. This species-specific acoustic detection framework can be scaled and tailored to monitor other species.

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Article
Creative Commons
Creative Common License - CCCreative Common License - BYCreative Common License - NCCreative Common License - SA
This is an Open Access article, distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike licence (http://creativecommons.org/licenses/by-nc-sa/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the same Creative Commons licence is included and the original work is properly cited. The written permission of Cambridge University Press must be obtained for commercial re-use.
Copyright
Copyright © The Author(s), 2022. Published by Cambridge University Press on behalf of Fauna & Flora International
Figure 0

Fig. 1 (a) The location of Sri Lankamalleswara Wildlife Sanctuary in India, (b) the location of the study area, and (c) the 1 × 1 km grid, indicating those grid cells in which we placed recorders and those where Jerdon's courser Rhinoptilus bitorquatus had been previously detected.

Figure 1

Fig. 2 The call of Jerdon's courser has two parts, Syllable 1 and Syllable 2, separated by an inter-syllable gap (ISG). The call duration comprises the two syllables and the inter-syllable gap. The spectral properties consist of a fundamental note at the lowest frequency followed by second and third harmonics above. The maximum (SH MaxF) and minimum frequency (SH MinF) of the second harmonic are indicated.

Figure 2

Fig. 3 Our analysis pipeline, showing the species elimination pathways for any putative calls of Jerdon's courser using (a) a database of species calling within the Jerdon's courser call band in Sri Lankamalleswara Wildlife Sanctuary, and (b) the detection algorithms in Raven Pro 2.0 beta and Kaleidoscope. We used known Jerdon's courser calls to create a recognizer in Raven Pro and Kaleidoscope to screen automated recordings. The resulting detections were then manually verified and categorized into known and unknown bird species based on the shortlist of species from (a). Unknown calls were then sent to 11 experts for identification. We subsequently performed a spectral cross-correlation between the calls tagged as most likely belonging to Jerdon's courser and the actual call of Jerdon's courser, to check for similarity.

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