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A more precise speciation and extinction rate estimator

Published online by Cambridge University Press:  07 October 2015

John Alroy
John Alroy*
Affiliation:
Department of Biological Sciences, Macquarie University, New South Wales 2109, Australia. E-mail: john.alroy@mq.edu.au
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Abstract

A new turnover rate metric is introduced that combines simplicity and precision. Like the related three-timer and gap-filler equations, it involves first identifying a cohort of taxa sampled in the time interval preceding the one of interest (call the intervals i0 and i1). Taxa sampled in i0 and i1 are two-timers (t2); those sampled in i0 and i2 but not i1 are part-timers (p); and taxa sampled only in either i1, i2, or i3 are newly notated here as either s1, s2, or s3. The gap-filler extinction proportion can be reformulated as (s1−s3)/(t2+p). The method proposed here is to substitute s3 with the second-highest of the three counts when the expected ordering s1≥s2≥s3 is violated. In simulation, this new estimator yields values that are highly correlated with those produced by the gap-filler equation but more precise. In particular, it rarely produces highly negative values even when sample sizes are quite small. It is mildly upwards biased when sampling is extremely poor and turnover rates are extremely low, but it is otherwise highly accurate. Examples of Phanerozoic extinction rates for four major marine invertebrate groups are given to illustrate the method’s improved precision. Based on the results, the procedure is recommended for general use.

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Type
Articles
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Paleobiology , Volume 41 , Issue 4 , September 2015 , pp. 633 - 639
Copyright
Copyright © 2015 The Paleontological Society. All rights reserved 

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References

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