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Computational analysis of genome or exome sequences may improve inherited disease diagnosis, but is costly and time-consuming.
Methods
We describe the use of iobio, a web-based tool suite for intuitive, real-time genome diagnostic analyses.
Results
We used iobio to identify the disease-causing variant in a patient with early infantile epileptic encephalopathy with prior nondiagnostic genetic testing.
Conclusions
Iobio tools can be used by clinicians to rapidly identify disease-causing variants from genomic patient sequencing data.
To assess feeding practices of infants born to HIV-positive women in Dar es Salaam, Tanzania. These data then served as a proxy to evaluate the adequacy of current infant feeding counselling.
Design
A cross-sectional survey of infant feeding behaviours.
Setting
Four clinics in greater Dar es Salaam in early 2008.
Subjects
A total of 196 HIV-positive mothers of children aged 6–10 months recruited from HIV clinics.
Results
Initiation of breast-feeding was reported by 95·4 % of survey participants. In the entire sample, 80·1 %, 34·2 % and 13·3 % of women reported exclusive breast-feeding (EBF) up to 2, 4 and 6 months, respectively. Median duration of EBF among women who ever breast-fed was 3 (interquartile range (IQR): 2·1, 4·0) months. Most non-breast-milk foods fed to infants were low in nutrient density. Complete cessation of breast-feeding occurred within 14 d of the introduction of non-breast-milk foods among 138 of the 187 children (73·8 %) who had ever received any breast milk. Of the 187 infants in the study who ever received breast milk, 19·4 % received neither human milk nor any replacement milks for 1 week or more (median duration of no milk was 14 (IQR: 7, 152) d).
Conclusions
Infant feeding practices among these HIV-positive mothers resulted in infants receiving far less breast milk and more mixed complementary feeds than recommended, thus placing them at greater risk of both malnutrition and HIV infection. An environment that better enables mothers to follow national guidelines is urgently needed. More intensive infant feeding counselling programmes would very likely increase rates of optimal infant feeding.
Eighteen arabica coffee introductions from the USDA germplasm collection were planted at 23° S latitude in Brazil from 1977 to 1982 to assess their yield potential and frost hardiness, compared with the cultivar Catuai Amarelo which is extensively planted in Brazil. Nine of the introductions had similar yields to Catuai Amarelo. Erecta T966 and Harrar yielded as well as Catuai Amarelo and were also more frost hardy. Tall, early maturing coffee varieties showed the least frost injury.
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