A preliminary ontogenetic series of common pandora (Pagellus erythrinus) larvae is presented showing that larvae of this species possess an occipital crest from 4 to 16 mm total length. Such a trait has been described as a diagnostic character of the larvae of another sparid fish, namely Pagrus pagrus, and has been erroneously considered as being absent in all other Sparidae species. This caused confusion and erratic identifications of the two species of larvae in Mediterranean ichthyoplankton investigations.

The John Dory, Zeus faber, has a pair of intrinsic sonic muscles on the swimbladder wall and produces sounds by rapid contractions of the muscles. The physical properties of the sounds and the detailed innervation pattern to the sonic muscle were investigated. The dory emitted two types of the sounds: ‘bark’ and ‘growl’. The bark consisted of continuous multiple pulses and lasted about 85 ms on the average. The growl consisted of a group of intermittent single-pulses and lasted for 50 ms to 1·2 s. The main frequencies of both sounds were almost similar and ranged between 200 to 600 Hz. The sonic muscles were innervated by the sonic branches of the first to fourth spinal nerves. The innervation from the first spinal nerve was newly revealed in the present study. A total of 1700 myelinated axons innervated the sonic muscles on both sides. There were no sex differences in the sonic muscle size as judged by the sonic muscle–somatic index (male: 0·675%, female: 0·670%).

Concentrations of elements in the sagittal otoliths of juvenile white anglerfish (Lophius piscatorius) from five locations in the north-east Atlantic were measured to test for evidence of segregation in the early life stages. The concentrations of some elements, notably copper, were different between locations. As such, the results suggest limited exchange between locations during some period of the early life history. The relevance of these results to our understanding of population structuring is discussed in relation to recent information on anglerfish movements and genetic structuring.

Male Chondracanthus lophii was studied using light and electron microscopy. Observations on external morphology and internal anatomy are presented. Males possess a full set of functional mouth parts, the digestive system is active and the dominant cell type in the midgut is identified as the vacuolar type B-cell, but the gut is a blind ending sac with no anus. The gut contents were a homogenous, amorphous mass. The combination of active feeding and digestion with a blind ending gut supports the inference that males feed on special secretions produced by glands in the nuptial organs of the female. It is speculated that dependence on such secretion reduces or eliminates the production of faecal matter. Observations on the reproductive system confirmed the typical chondracanthid pattern.

In Mar del Plata the octocoral Tripalea clavaria is highly abundant on the different quartzitic rocky outcrops 18–20 m deep. Reproductive aspects of T. clavaria including its distribution and population structure have been described. Monthly sampling and observations were carried out by SCUBA diving from November 2000 to October 2001 at Banco del Medio (38°10′S 57°28′W). Tripalea clavaria occurs in patches; most colonies were 3·0–8·9 cm in height. The species appears to be a gonochoric brooder. Female colonies were significantly more abundant than males, which could be identified only from February to June, when spermaries were present. Oocytes were found even in very small colonies (from 3·5 cm height), being 40 to 200 μm in diameter, the predominant size-group around the year. Development of the oocytes required several months, beginning in May and ending with the production of larvae from March to May. Young, stalked oocytes were found at the base of the polyps attached to the mesenteries in May–June. During the following six months they grew in size; maximal oocyte diameter was 700 μm, observed in April/May. Asexual reproduction was negligible, indicating that population maintenance is based on sexual reproduction.

Fish assemblages associated with wave exposed and sheltered sides of breakwaters, and with adjacent sandy habitats were studied in western Calabria (Mediterranean Sea, south-western Italy). Overall, 26 fish taxa were recorded (21 associated with exposed breakwater sides, 21 with sheltered sides, and four with sand). Fish assemblages significantly differed between breakwaters (both sides) and sand, and, to a lesser extent, between exposed and sheltered sides of breakwaters in terms of whole assemblage structure, densities of species, and juvenile stages.

Spatial surveys of marine benthic habitats and biota based on the interpretation of acoustic data were carried out at two sites in the eastern English Channel each representing different scales of geographic area and intensity of survey. A small area (4×12 km) crossing the Hastings Shingle Bank was surveyed at a relatively high intensity (track spacing 400 m) and was nested within a larger area between Hastings and Dungeness (12×40 km), which was surveyed at a lower intensity (track spacing 2 km). Surveys were conducted with two acoustic ground discrimination systems (AGDS), RoxAnn and QTC-VIEW and the primary purpose of the investigation was to compare the performance of the two AGDS using a common approach to analysis of the different data outputs (E1 and E2 for RoxAnn and the Q eigenvectors from QTC-VIEW). Exploratory data analysis using variography indicated that interpolation between tracks was justified for the smaller site to create a complete coverage, but was limited to the creation of a digital image of the track data for the larger area. Grab and video sample data were available for supervised classification of the AGDS data and interpreted sidescan images for comparison with unsupervised classification. Both AGDS gave similar outputs, although RoxAnn consistently gave slightly better levels of performance than QTC-VIEW as measured using error matrices. Although the investigation was not designed to compare the performance of AGDS and sidescan, the outputs from AGDS were similar to the visual interpretation of the sidescan sonar data. It was concluded that despite the inherent limitations of AGDS, they may be suitable for providing distribution maps at a broad scale that can give a context for the interpretation of finer scale survey of smaller, nested areas.

The population dynamics in the coastal bacterioplankton community off Plymouth (UK) was studied in samples proportionally diluted (99%, 90%, 66% and 0%) with sterile seawater, incubated in the dark for 2–4 days and monitored by flow cytometry. Nucleic acid content of cells, stained with SYBR Green I DNA specific dye, was used as an index of a genome size. Using flow sorting and fluorescence in situ hybridization (FISH) with a set of ribosomal RNA targeted oligonucleotide probes, the phylogenetic composition of dominant cytometric groups of bacterioplankton was determined to be similar during growth in the dilution series. The proportion of the low nucleic acid (LNA) group decreased and correspondingly the high nucleic acid (HNA) groups increased with dilution. The assimilation rates of free amino acids, a highly labile nutrient pool, were determined by flow sorting the dominant groups after short incubations with 35S-methionine tracer. The relative cellular amino acid assimilation by the LNA cells increased with dilution, while the activity of the HNA cells either decreased or remained unchanged. However, highly metabolically active LNA bacteria were overgrown by the HNA bacteria, presumably because the small genome size—an adaptation to living in an oligotrophic environment—did not allow the LNA group to grow sufficiently fast to compete with the HNA group under experimentally reduced grazing pressure. To examine the experimental results a numerical model of bacterioplankton population dynamics was formulated based on the hypothesis that the LNA cells consume only a labile fraction of organic nutrients (amino acids etc.), while the HNA cells feed on both the labile and more refractory sources of nutrients, and that in the absence of phytoplankton the labile source of nutrients is produced entirely by the bacterivorous flagellates. The model simulations gave credence to the hypothesized primary dependence of the LNA group on labile organic nutrients recycled within the microbial loop.

The structural parameters of sponge-dominated benthic communities from two Mediterranean caves in two seasons, autumn (November) and spring (June) were compared. The percentage of species in common between communities in each cave was calculated as a rough estimate of the capacity of species dispersion in each cave. The Shannon diversity index and Kulczynski similarity index were calculated for each community. Moreover, we studied the spatial distribution, patchiness and interspecies contacts of the most abundant species. The value of α-diversity was quite constant among communities of the Cabrera cave but decreased from the external to the innermost community in the Medes cave. The Kulczynski similarity index was generally lower among samples of the Cabrera cave. The most abundant sponge species showed a predominantly clumped distribution, especially in the most internal communities of the two caves. The innermost community of the Medes cave had the highest number of patches. Finally, the study of contacts among species that were non-random (meaning species that were in contact with a given species significantly more or less frequently than expected) showed that they were very common in the two seasons and in all communities, indicating the importance of biotic associations among benthic species in cave assemblages.

Slope Water anticyclonic Oceanic eDDIES (SWODDIES) are typical mesoscale features of open-ocean waters of the southern Bay of Biscay which usually develop in winter by shedding from the seasonal poleward current flowing along the northern Spanish slope. These eddies have been intensively studied from the physical perspective. However, their effect on the distribution of biological properties and on the functioning of the pelagic ecosystem has not been assessed so far. To this aim, a sea-truth, multidisciplinary and comprehensive study of a SWODDY was carried out in summer 1998. The eddy, radius of ≈50 km, was initially centred at 45·5°N 6·0°W, being characterized by a relatively homogeneous core of water in the centre of the eddy extending from 80 to about 200 dbar. In the central region of the core, temperature (12·55–12·75°C) and salinity (≈35·70) values were higher than outside the eddy. The optical properties of the eddy also differed from those of the surrounding waters. A distinct biological signature was found associated with the eddy. Depth-integrated chlorophyll-a concentrations were 25% higher at the eddy centre where upward doming of the seasonal pycnocline (up to 30 dbar) occurred. Enhanced phytoplankton biomass was related to a higher contribution of >10 μm cells, mainly represented by diatoms and chrysophyceans. Phytoplankton and mesozooplankton species composition in and outside the eddy differed significantly reflecting the coastal origin of the water parcel trapped by the eddy. The sharp modification of the planktonic community composition, biomass and associated size-structure caused by slope water oceanic eddies are likely to exert a significant effect upon the upper trophic levels of the pelagic ecosystem of the southern Bay of Biscay.

An assemblage of shallow-water fish was sampled with a small beach seine over monthly 24-h periods between April 2000 and March 2001 at the sandy beach Duće Glava in the eastern Adriatic. Monthly sets of samples were divided into day and night catches to examine the stability of diel differences in assemblage structure over a 1-y period. A total of 61 species was caught, of which six were exclusively diurnal and 12 were nocturnal. According to abundance and biomass of individuals during day and night, the most abundant species were categorized into several groups. Ophidion rochei was exclusively nocturnal, while Nerophis ophidion and Echiichthys vipera were mostly nocturnal. Diplodus annularis and Mullus surmuletus were slightly nocturnal. Diplodus vulgaris, Pomatoschistus marmoratus and Atherina boyeri lacked a diel pattern. Sardina pilchardus, Lithognathus mormyrus, Atherina hepsetus, Sarpa salpa and Mullus surmuletus abundance peaked for a few months, probably related to timing of spawning and recruitment. At the assemblage level, the diel per cent similarity index indicates that there were major differences between the day and night assemblages in April, September, March, and August with respect to number of individuals and September, October, May and March with respect to biomass.

A multi-technique approach was used to map the spatial distribution of seabed biotopes (i.e. physical habitats and their associated benthic assemblages) in the vicinity of Hastings Shingle Bank in the eastern English Channel, part of which is licensed for the extraction of marine aggregates for the construction industry. An area of seabed, approximately 12×4 km in size, was surveyed using a high-resolution sidescan sonar system, and a mosaic of the output was produced, covering 100% of the survey area. The area was then divided into acoustically distinct regions based on the sidescan sonar data, and the benthic communities and sediment types within each of the regions were ground-truthed using a Hamon grab fitted with a video camera, and using a heavy duty 2-m beam trawl. Additional information concerning the seabed was obtained through the application of video and photographic techniques. Sediments within the survey area ranged from cobbles and coarse gravels on the Shingle Bank, to various grades of sands to the north and south. Analysis of faunal data revealed the presence of statistically distinct biological assemblages within each acoustic region. Using all available data, four discrete biotopes were identified and their spatial distribution mapped across the survey area.

The densities of two common intertidal/shallow subtidal bivalves, Soletellina alba and Arthritica helmsi, were sampled in vegetated and unvegetated habitats of the Hopkins River estuary on three occasions during the autumn/winter 1995. Winter flooding coincided with mass mortalities of the infaunal bivalve S. alba, but not A. helmsi. Mortalities were apparent for individuals living deeper in the sediment (≈35 cm) in vegetated and unvegetated habitats, but small S. alba (<1 mm) were less susceptible to mortality than larger individuals (>1 mm). Mortalities were similar across different habitat types and sediment depths, and at multiple sites within close proximity to the estuary mouth.

Competent larvae of the commercially important marine gastropod Concholepas concholepas (Gastropoda: Muricidae) ‘loco’, were collected in the field and exposed in the laboratory to adult conspecific shells with and without barnacle epibionts. Settlement and metamorphosis was induced by the presence of barnacles on shells of live or dead conspecifics, but not by C. concholepas shells without barnacles. Results from laboratory experiments agreed well with field surveys showing the presence of recruits on conspecific shells overgrown with barnacles in shallow subtidal habitats (∼3–30 m deep), suggesting the potential importance of barnacles in inducing settlement and metamorphosis of locos under natural conditions. Most loco recruits were found below the C. concholepas shell apex, feeding on barnacles, inhabiting crevices among them, and inside dead barnacles. The mean size of recruits on locos' shells increased over four months from the beginning of the settlement season and no individual larger than 1·5 cm was observed, suggesting that they abandon adult loco shells at this size, roughly 5–6 months after settlement.

The near-bottom mesozooplankton was caught by a four net suprabenthic sledge on six sites in the English Channel during both spring and autumn. Taxa richness showed no significant difference between seasons, nevertheless diversity (H′), evenness (J) and normalized rarefaction number of taxa E(S91) were higher in autumn than in spring at each site except at Site 2 offshore Plymouth, where Calanus helgolandicus dominated at both seasons. Copepods dominated in abundance at each site in spring while crustacean larvae were dominant in autumn except at Site 2 offshore Plymouth, where copepods remained dominant and, at Site 6 in the Dover Strait, where no significant difference occurred between copepod and crustacean larvae abundances. Four assemblages were distinguished depending on the season. Abundance was higher during the day than at night as a result of a mesozooplankton concentration in the near-bottom layer during the daytime. Moreover, three vertical patterns of suprabenthic mesozooplankton were identified according to their distribution above the near-bottom layer: taxa distributed homogeneously in the four nets; taxa concentrated in nets 2 and 4, and taxa concentrated in the three upper nets.

The influence of two sea-cage fish farms at Gran Canaria Island (Canary Islands, central east Atlantic Ocean) on the intertidal macrobenthic assemblages was studied. Two controls and two impact locations were established at each farm. The composition and coverage of the macrobenthic assemblages were surveyed every three months using image processing analyses. Significant dissimilarities were found between control and impact locations at both sea-cage fish farms. The presence of: (1) algal species tolerant to pollution (Caulerpa racemosa and Corallina elongata); and (2) filter-feeding fauna (Anemonia sulcata) at impact locations, indicate that the fish farming activity is causing an effect on the surrounding intertidal macrobenthic assemblages of both sea-cage fish farms.

Meiobenthic community structure was investigated at different spatial scales (from 100 metres to centimetres) on and adjacent to a group of coral-topped sandy mounds in the bathyal north-east Atlantic (Darwin Mounds, Rockall Trough) and related to the environmental conditions in the area, mainly differences in sediment organic carbon content and presence of biogenic structures. Meiobenthos abundances were similar to those observed in other deep-sea sites, with nematodes representing at least 94% of the total community. The dominant nematode genera were Microlaimus, followed by Sabatieria, Richtersia, Rhynchonema and Trefusia, together with typical deep-sea genera (e.g. Halalaimus and Acantholaimus). Multivariate analysis of nematode generic relative abundances at the different stations indicated that there was no significant influence on distribution resulting from large scale topographic and biogeochemical conditions around the mounds. The same genera were associated with dead tests of the xenophyophore Syringammina fragilissima and in the surrounding sediments. The vertical distribution of nematodes on and adjacent to the mound showed some unusual features, as the deeper layers of the sediments were inhabited by stilbonematids. These genera harbour ectosymbiotic, chemoautotrophic bacteria and have not previously been recorded from the deep sea. The occurrence of stilbonematids in notable numbers in the subsurface layers of the sediments in the vicinity of the Darwin Mounds provides evidence for the occurrence of anoxic microenvironments.

The hypothesis investigated in this paper is that the interstitial polychaete Saccocirrus sonomacus is excluded from beaches impacted by tailing disposal as a result of the blocking of the interstitial space and not by a response to the toxicity of elevated copper concentrations. Field evidence suggested that abundances of S. sonomacus on beaches where they would be expected to occur under natural conditions are lower when a beach has received a significant amount of tailings. In choice experiments, S. sonomacus always preferred an open coarse sand matrix to one where the interstitial spaces had been blocked by fine sand (a tailings substitute). Using invitro bioassays, we found that the LC50 for S. sonomacus with copper was 44 μg Cu l−1, this being higher than the values of interstitial labile copper measured on the beaches investigated in this study. We therefore accept the hypothesis of a physically mediated exclusion rather than a toxically mediated one.

Crab-baited traps, with a 5-mm diameter opening, were deployed 90 mm off the seabed monthly at Lobster Bay, Hong Kong, for one year between 1998 and 1999. Visitors drawn to the traps were mainly species of Ceradocus (Gammaridea: Melitidae), Tisbe (Harpacticoida: Tisbidae) and Nebalia (Leptostraca: Nebaliacea). Apart from Ceradocus sp., all were scavengers with catches using baited traps significantly exceeding unbaited controls. Ceradocus sp. was apparently drawn to traps for refuge. The trapped scavenger community composition changed with deployment duration in the presence of bait. Nebalia sp., Neanthes cricognatha (Polychaeta: Nereidae) and Lepedepecreum sp. (Gammaridea: Lysianassoidea) were identified mostly two/three-days post-deployment, exhibiting a potential preference for rotten organic matter. Seasonal catches were also identified for all three visitors with maxima between October 1998 and April 1999. Such seasonal patterns might be related to either turbulence destabilizing the substratum during this period or life cycle patterns in the study area.

This is the first record of the epizoic barnacle (Octolasmis angulata) on the crab Charybdis feriatus. Prevalence of O. angulata was 85·7% and mean intensity of infestation was 59±64·5 (range 3–239). Prevalence and mean intensity of infestation increased with host size in the range 55–120 mm carapace width. Barnacles occurred most frequently on the gills, anterior branchial chamber wall in the epibranchial space, occasionally on the wall of the branchial chambers beneath the gills and on the scaphognathite within the branchial chambers. Most barnacles were observed on the hypobranchial surface of the gills.