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Molecular characterization and B-cell epitope analysis of the TSP11 gene in Echinococcus infection strains from Yunnan Province

Published online by Cambridge University Press:  12 November 2024

Qian Xu
Affiliation:
Yunnan Institute of Parasitic Diseases, Puer, 665000, China
Zhengqing Wang
Affiliation:
Yunnan Institute of Parasitic Diseases, Puer, 665000, China
Jinrong Zi
Affiliation:
Yunnan Institute of Parasitic Diseases, Puer, 665000, China
Xuan Cai
Affiliation:
Yunnan Institute of Parasitic Diseases, Puer, 665000, China
Fangwei Wu
Affiliation:
Yunnan Institute of Parasitic Diseases, Puer, 665000, China
Benfu Li
Affiliation:
Yunnan Institute of Parasitic Diseases, Puer, 665000, China
Jia Peng
Affiliation:
Yunnan Institute of Parasitic Diseases, Puer, 665000, China
Jianxiong Li
Affiliation:
Yunnan Institute of Parasitic Diseases, Puer, 665000, China
Xinliu Yan
Affiliation:
Yunnan Institute of Parasitic Diseases, Puer, 665000, China
Ying Dong*
Affiliation:
Yunnan Institute of Parasitic Diseases, Puer, 665000, China
Yaming Yang*
Affiliation:
Yunnan Institute of Parasitic Diseases, Puer, 665000, China
*
Corresponding author: Ying Dong; Email: luxidongying@126.com; Yaming Yang; Email: yangymsm@126.com
Corresponding author: Ying Dong; Email: luxidongying@126.com; Yaming Yang; Email: yangymsm@126.com

Abstract

This study investigates the molecular intricacies of the transmembrane protein TSP11 gene in Echinococcus strains isolated from livestock and patients in Yunnan Province afflicted with Echinococcus granulosus (E. granulosus) between 2016 and 2020. Gene typing analysis of the ND1 gene revealed the presence of the G1 type, G5 type and untyped strains, constituting 52.4, 38.1 and 9.5%, respectively. The analysis of 42 DNA sequences has revealed 24 novel single nucleotide polymorphic sites, delineating 11 haplotypes, all of which were of the mutant type. Importantly, there were no variations observed in mutation sites or haplotypes in any of the hosts. The total length of the TSP11 gene's 4 exons is 762 bp, encoding 254 amino acids. Our analysis posits the existence of 6 potential B-cell antigenic epitopes within TSP11, specifically at positions 49-KSN-51, 139-GKRG-142, 162-DNG-164, 169-NGS-171, 185-DS-186 and 231-PPRFTN-236. Notably, these epitopes exhibit consistent presence among various intermediate hosts and haplotypes. However, further validation is imperative to ascertain their viability as diagnostic antigens for E. granulosus in the Yunnan Province.

Information

Type
Research Article
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
Copyright © The Author(s), 2024. Published by Cambridge University Press
Figure 0

Table 1. Primer sequence and other information

Figure 1

Figure 1. Intermediate host, diseased organ, protocephalic segment of Echinococcus granulosusNote: a: Yak from Weixi County, Diqing Prefecture; b: Diqing Tibetan pig; c: the liver; d: lungs; e: diseased part of the lung (arrow points to the diseased part); f, g: hydatid (40X); h, i: protoscolex (10X)

Figure 2

Figure 2. Electrophoresis Map of PCR Amplified Products of TSP11 Gene and ND1 Gene in the Pathological Organs of Echinococcus granulosusNote: M: DNA marker; 1. 2: Negative control of the first and second rounds of PCR of TSP11 gene; 3: TSP11 gene PCR positive control; 12. 13: Negative control of ND1 gene in the first and second rounds of PCR; 14: ND1 gene positive control; 4. 5, 6, 7, 8, 9, 10: amplification products of TSP11 gene; 16. 17, 18, 19, 20, 21, 22: amplification products of ND1 gene

Figure 3

Table 2. Interspecific difference of ND1 gene

Figure 4

Table 3. Single nucleotide polymorphism in the TSP11 gene of Echinococcus granulos

Figure 5

Table 4. Different haplotypes having mutations in TSP11gene

Figure 6

Figure 3. Evolutionary network of haplotype of TSP11 gene in the diseased organs of Echinococcus granulosus.Note: The size of the circle is proportional to the number of isolates showing a particular haplotype; lines represent evolutional steps connecting haplotypes.

Figure 7

Table 5. Prediction of antigen determinant of TSP11 gene

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