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Spatio-temporal behaviour of SIR models with cross-diffusion and vital dynamics

Published online by Cambridge University Press:  09 January 2025

Maryam Ahmadpoortorkamani
Affiliation:
Department of Mathematics and Statistics, University of Saskatchewan, Canada
Alexei Cheviakov*
Affiliation:
Department of Mathematics and Statistics, University of Saskatchewan, Canada
*
Corresponding author: Alexei Cheviakov; Email: a.f.s@usask.ca
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Abstract

Contemporary epidemiological models often involve spatial variation, providing an avenue to investigate the averaged dynamics of individual movements. In this work, we extend a recent model by Vaziry, Kolokolnikov, and Kevrekidis [Royal Society Open Science 9 (10), 2022] that included, in both infected and susceptible population dynamics equations, a cross-diffusion term with the second spatial derivative of the infected population density. Diffusion terms of this type occur, for example, in the Keller–Siegel chemotaxis model. The presented model corresponds to local orderly commute of susceptible and infected individuals and is shown to arise in two dimensions as a limit of a discrete process. The present contribution identifies and studies specific features of the new model’s dynamics, including various types of infection waves and buffer zones protected from the infection. The model with vital dynamics additionally exhibits complex spatio-temporal behaviour that involves the generation of quasiperiodic infection waves and emergence of transient strongly heterogeneous patterns.

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Papers
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
© The Author(s), 2025. Published by Cambridge University Press
Figure 0

Figure 1. Mobility patterns in a lattice-based SIR model. The chart visualises the mobility dynamics within a lattice-based SIR model, showing the flow of individuals between neighbouring compartments.

Figure 1

Figure 2. Dynamics of the SIR model (1.1): wave shapes of $I$, $S$ and $R$ at $t=0, 3, 6, 9, 12$.

Figure 2

Figure 3. Influence of the diffusion coefficient on the infection wave dynamics: $D=10^{-3}$ (left), $D=10^{-5}$ (right).

Figure 3

Table 1. Estimates $A(D)$ and $P(D)$ for the infection peak trajectories fit into $X(t;\, D)=A(D) t^{P(D)}$ for different $D$

Figure 4

Figure 4. The I-peak dynamics in the SIR model (1.1) and its variation with $D$.

Figure 5

Figure 5. A self-similar solution of (3.4) modelling an expanding infection wave in half-space.

Figure 6

Figure 6. $I(x,t)$ in a buffer zone (between the red lines).

Figure 7

Figure 7. $I(x,t)$, $S(x,t)$ and $R(x,t)$ in a buffer zone.

Figure 8

Figure 8. Dynamics of the three compartments in model (4.1) with $D = 10^{-5}$, $\beta = 1$, $\gamma = 0.4$, $\mu = 0.1$, $m = 0.9$, $K = 4$, $r = 0.3$, $I_0 = \exp ({-}1000 \cdot x^2)$, $S_0 = 1$, $R_0 = 0$.

Figure 9

Figure 9. Left: the dynamics of the infected population waves. Right: $I$, $S$ and $R$ compartments at $x=1/9$.

Figure 10

Figure 10. Waiting period for infection propagation: the effect of the initial susceptible population size $S_0$.

Figure 11

Figure 11. Dynamics of the three compartments in model (4.1) with vital dynamics: the case of a buffer zone.

Figure 12

Figure 12. Left: solution of the PDE (4.1) with (4.4), (4.5) and $K=5$. Right: the phase plane trajectory of the corresponding system (4.2) for $K=(1, 5, 10^4)$, parameters (4.6), and initial conditions (4.5) corresponding to $K=10^4$. Asterisks denote the level curve of the approximately conserved integral (4.6).

Figure 13

Figure 13. ‘Dark spike’ formation in the PDE system (4.1) with (4.8).

Figure 14

Figure 14. Cross-section of Figure 15 at $t=55$.

Figure 15

Figure 15. Double ’dark spikes’ in case of a lower recovery rate $\gamma =0.1$.

Figure 16

Figure 16. Physical (non-negative $\tilde{I}$, $\tilde{S}$) and non-physical (negative $\tilde{I}$) solutions of the time-independent ODEs (4.9).

Figure 17

Figure 17. A buffer zone for the two-dimensional PDE model (2.1) with cross-diffusion and no vital dynamics.

Figure 18

Figure 18. Generation of quasi-periodic waves in the two-dimensional SIR model (1.2) with cross-diffusion and vital dynamics.