It is widely believed that statistical closure theories for dynamical systems provide statistics equivalent to those of the governing dynamical equations from which the former are derived. Here, we demonstrate counterexamples in the context of the widely used mean-field quasi-linear approximation applied to both deterministic and stochastic two-dimensional fluid dynamical systems. We compare statistics of numerical simulations of a quasi-linear model (QL) with statistics obtained by direct statistical simulation via a cumulant expansion closed at second order (CE2). We observe that although CE2 is an exact statistical closure for QL dynamics, its predictions can disagree with the statistics of the QL solution for identical parameter values. These disagreements are attributed to instabilities, which we term rank instabilities, of the second cumulant dynamics within CE2 that are unavailable in the QL equations.