Smallflower umbrella sedge is a problematic weed in direct-seeded rice in the midsouthern United States. It recently has evolved resistance to the acetolactate synthase (ALS) –inhibiting herbicide halosulfuron in Arkansas rice. Studies were conducted (1) to determine if the resistant biotype is cross resistant to other ALS-inhibiting herbicides, (2) to evaluate alternative herbicide control options, and (3) to determine the mechanism of resistance. Whole-plant bioassay revealed that halosulfuron-resistant plants were not controlled by bispyribac–sodium, imazamox, and penoxsulam at the labeled field rate of each herbicide. The level of resistance to these herbicides, based on the lethal dose needed to kill 50% of plants (LD50) was ≥ 15-fold compared to a susceptible biotype. Both biotypes were controlled >96% with bentazon and propanil and ≤ 23% with quinclorac, thiobencarb, and 2,4-D. Hence, effective control measures exist; albeit, the number of herbicide options appear limited. Based on in vitro ALS enzyme assays, altered target site is the mechanism of resistance to halosulfuron and imazamox. Massively parallel sequencing with the use of the Illumina HiSeq detected an amino acid substitution of Pro197-to-His in the resistant biotype that is consistent with ALS-inhibiting herbicide resistance in other weed species.

Waterhemp is an increasingly problematic weed in the U.S. Midwest, having now evolved resistances to herbicides from six different site-of-action groups. Glyphosate-resistant waterhemp in the Midwest is especially concerning given the economic importance of glyphosate in corn and soybean production. Amplification of the target-site gene, 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) was found to be the mechanism of glyphosate resistance in Palmer amaranth, a species closely related to waterhemp. Here, the relationship between glyphosate resistance and EPSPS gene amplification in waterhemp was investigated. Glyphosate dose response studies were performed at field sites with glyphosate-resistant waterhemp in Illinois, Kansas, Kentucky, Missouri, and Nebraska, and relative EPSPS copy number of survivors was determined via quantitative real-time polymerase chain reaction (qPCR). Waterhemp control increased with increasing glyphosate rate at all locations, but no population was completely controlled even at the highest rate (3,360 g ae ha−1). EPSPS gene amplification was present in plants from four of five locations (Illinois, Kansas, Missouri, and Nebraska) and the proportion of plants with elevated copy number was generally higher in survivors from glyphosate-treated plots than in plants from the untreated control plots. Copy number magnitude varied by site, but an overall trend of increasing copy number with increasing rate was observed in populations with gene amplification, suggesting that waterhemp plants with more EPSPS copies are more resistant. Survivors from the Kentucky population did not have elevated EPSPS copy number. Instead, resistance in this population was attributed to the EPSPS Pro106Ser mutation. Results herein show a quantitative relationship between glyphosate resistance and EPSPS gene amplification in some waterhemp populations, while highlighting that other mechanisms also confer glyphosate resistance in waterhemp.

Greenhouse studies were conducted to determine the influence of spray-solution pH, adjuvant, light intensity, temperature, and glyphosate on the efficacy of saflufenacil on horseweed. Control of glyphosate-resistant horseweed from saflufenacil alone was greatest with a spray-solution pH of 5, compared with pH 7 or 9. However, when glyphosate was added to saflufenacil, similar GR50 values were measured with spray solutions adjusted to pH 5 and 9, and horseweed control at pH 9 was 38% greater than at pH 7. The efficacy of saflufenacil on horseweed was 36% greater when crop oil concentrate was used as an adjuvant compared with nonionic surfactant, regardless of the addition of glyphosate or the sensitivity of the horseweed population to glyphosate (resistant vs. susceptible). The addition of glyphosate to low rates of saflufenacil increased control over saflufenacil applied alone on glyphosate-susceptible and -resistant horseweed. Saflufenacil activity was greater under low light intensity (300 μmol m−2 s−1) than high light intensity (1,000 μmol m−2 s−1). Although initial horseweed control was greater under high temperature (27 C) compared with low temperature (10 C), by 21 d after treatment horseweed dry weight was similar from saflufenacil applied under high and low temperatures.

Reports of kochia control failure with glyphosate in western Kansas increased dramatically in the years following confirmed presence of glyphosate-resistant (GR) populations in 2007. In this study, progeny from 8 of 16 geographically dispersed kochia populations in western Kansas (seed collected in 2010) were confirmed to be resistant to glyphosate by conducting whole-plant dose-response (in greenhouse and/or outdoor environments) and shikimate-accumulation assays. Additionally, the relationship between 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) gene copy number and glyphosate resistance levels was investigated. A known glyphosate-susceptible (GS) kochia population from Ellis County, Kansas was used for comparison in all studies. Based on the herbicide rate that caused 50% reduction in biomass compared to untreated control (GR50) values, the 8 GR kochia populations were 4 to 11 times more resistant to glyphosate compared to the GS population. The GR50 values of kochia populations were 1.58 to 1.85 times higher under an outdoor environment compared to when grown in the greenhouse. Glyphosate-treated leaf discs of the GS kochia plants accumulated consistently higher amounts of shikimate than those of the GR plants. Additionally, the GR plants with higher levels of resistance to glyphosate had higher EPSPS : acetolactate synthase (ALS) relative gene copy number compared to those with low levels of resistance.

Broomsedge populations have increased substantially over the last decade on roadsides in Georgia. The invasiveness of this species might have resulted from imazapic use for bermudagrass growth regulation and the limited use of MSMA on roadsides. The objectives of this research were to evaluate (1) differential growth inhibition of bermudagrass and broomsedge to imazapic, (2) susceptibility of isolated acetolactate synthase (ALS) enzymes of bermudagrass and broomsedge to imazapic, (3) broomsedge control with tank mixtures of imazapic with MSMA, and (4) the influence of imazapic on absorption and translocation of 14C-MSMA. In greenhouse experiments, imazapic reduced bermudagrass shoot biomass ~ 2 times more from the nontreated than broomsedge. Isolated ALS enzymes of bermudagrass were ~ 100 times more susceptible to inhibition by imazapic than broomsedge. In field experiments, imazapic provided no control of broomsedge, but MSMA alone controlled broomsedge 81% at 12 mo after initial treatments (MAIT). Broomsedge control was reduced to 45% when MSMA was tank mixed with imazapic at 12 MAIT. In laboratory experiments, imazapic tank mixtures did not reduce broomsedge absorption or translocation of 14C-MSMA. Overall, bermudagrass is more susceptible to imazapic due to greater target-site inhibition than broomsedge. Results emphasize the importance of MSMA use for broomsedge control, but agronomists should avoid tank mixtures with imazapic to reduce potential antagonism.

Native polyacrylamide gel electrophoresis was used to identify polymorphisms in α- and β-esterases loci and electrophoresis in starch gel to identify polymorphism in malate dehydrogenase (MDH; EC 1.1.1.37) and acid phosphatase (ACP; EC 3.1.3.2) isozymes loci in leaf tissues from samples of horseweed and hairy fleabane populations to determine genetic diversity and population structure. Similar or differential genetic divergence between the two species may guide specific use of herbicides. For samples of plants with high genetic similarity it is possible to adopt similar mechanisms and processes for their control. The proportion of polymorphic loci was 57.14, 50.0, and 53.6%, in samples of horseweed and hairy fleabane, for EST, MDH, and ACP isozymes, respectively. A comparison of the diversity parameters in the two species showed that the number of alleles is similar in the horseweed and hairy fleabane plants. The estimated heterozygosity in horseweed and hairy fleabane was also very close. A relatively low level of population differentiation was detected between horseweed and hairy fleabane (FST = 0.0199), which suggests a substantial genetic exchange among the two species. Accordingly, estimate of gene flow was high (Nm = 12.3172) for the alleles of the loci Est, Mdh, and Acp. The Nei's identity (I) values also was high (I = 0.9561) indicating very high similarity between the two Conyza species. AMOVA showed higher genetic variation within (95%) than among (5%) the two samples. The low genetic structure and high value of genetic identity was an important indication that alleles are exchanged between horseweed and hairy fleabane populations, and provides additional evidence of occurrence of outcrossing between populations or dispersion of samples of one for other site.

Glyphosate is used in the transition zone to control annual bluegrass in fully dormant warm-season grasses. A suspected resistant (R) biotype of annual bluegrass was identified on a golf course in South Carolina after at least 10 consecutive years of glyphosate application. Greenhouse bioassays revealed the R biotype was 4.4-fold resistant to glyphosate compared with a standard susceptible (S) biotype. Further studies were conducted to investigate the mechanism conferring glyphosate resistance in the R biotype. Leaf discs of both biotypes accumulated shikimate in response to increasing glyphosate concentration, but the glyphosate concentration resulting in 50% EPSP synthase inhibition as a result of shikimate accumulation (I50) was 4.2-fold higher in the R biotype compared with the S biotype. At the whole plant level, similar levels of shikimate accumulation were observed between biotypes at 6 and 24 h after treatment (HAT) with glyphosate, but greater shikimate accumulation occurred in the S biotype at 72, 120, and 168 HAT. Shikimate levels decreased in the R biotype after 72 HAT. There were no differences in 14C-glyphosate absorption between biotypes. However, more 14C-glyphosate translocated out of the treated leaf in the R biotype and into root tissues over time compared with the S biotype. Partial sequencing of the EPSP synthase gene revealed a point mutation that resulted in an Ala substitution at Pro106. Although other mechanisms may contribute to glyphosate resistance, these results confirm a Pro106 to Ala substitution is associated with resistance to glyphosate in the R annual bluegrass biotype.

Itchgrass is an aggressive weed species in tropical agroecosystems. Because of phytosanitary restrictions to exports, pineapple producers must use a zero tolerance level for this species. An understanding of itchgrass seedling emergence would help producers to better time POST control. The objective of the present study was to characterize itchgrass seedling emergence patterns and develop a predictive model. Multiple field experiments were conducted in four agricultural fields in Costa Rica between 2010 and 2011 for a total of 9 site-years. Itchgrass consistently showed a biphasic emergence pattern, with a first emergence phase that was faster and more consistent across site-years than the second one. Weibull + logistic models based on chronological time (R2adj = 0.92) and thermal time with Tbase = 20 C (R2adj = 0.92) provided the best fit for the combined emergence data for two experimental locations in 2010. Both models predicted itchgrass seedling emergence adequately for most site-years, but the thermal-time model was more accurate (R2adj = 0.64 to 0.86) than the chronological model (R2adj = 0.31 to 0.74), especially when temperatures were high. Both models showed high accuracy in the first emergence phase but tended to underestimate emergence rate during the second phase. The models predicted 50% emergence at 14 d or 80 growing degree days and the stabilization of the first emergence phase at approximately 25 d or 200 growing degree days. Thus, these models can be used to properly time itchgrass POST control. More research is needed to understand the regulatory mechanisms responsible for the variability of the second emergence phase.

Johnsongrass is a common weed of corn in Chile, which is most often controlled by nicosulfuron, an acetohydroxyacid synthase (AHAS)-inhibiting herbicide. Recurrent nicosulfuron use has resulted in selection for resistant johnsongrass biotypes. We conducted studies to determine nicosulfuron resistance levels in two johnsongrass biotypes from Chile and to investigate if this resistance was target-site mediated. Whole-plant resistance to nicosulfuron was 33 and 46 times higher in resistant (R) than in susceptible (S) plants grown from seed and rhizomes, respectively. The nicosulfuron concentrations for 50% inhibition of AHAS enzyme activity in vitro were more than 11 times higher in R than in S plants. Sequencing analysis of the AHAS coding sequence revealed a Trp-574-Leu substitution in both R biotypes. This study shows that resistance to nicosulfuron in the two R biotypes is conferred by an altered target site. We also report the first consensus sequence of the johnsongrass AHAS gene corresponding to the known mutation sites conferring resistance to AHAS-inhibiting herbicides.

Japanese brome is a winter annual weed commonly found in wheat fields in China. Laboratory and greenhouse experiments were carried out to determine the effect of temperature, light, pH, osmotic stress, salt stress, and burial depth on the germination and emergence of Japanese brome. Germination was greater than 98% under a wide temperature range of 5 to 30 C and onset of germination was shortened as temperature increased. Light was not required for germination to occur and pH values from 5 to 10 had insignificant effect on germination. Germination was reduced by osmotic stress or salt stress and no germination occurred at −1.3 MPa or 360 mM, suggesting that Japanese brome seed was quite tolerant to osmotic potential and salinity. Seedling emergence was greatest (98%) when seeds were placed on the soil surface but decreased with increasing of burial depth. Only 7% of seedlings emerged at a depth of 5 cm. The results of this study have contributed to our understanding of the germination and emergence of Japanese brome and should enhance our ability to develop better control strategies in wheat farming systems of the Huang-Huai-Hai Plain of China.

Weedy red rice is a major weed pest of rice in the southern United States. Outcrossing between red rice and commercial tropical japonica rice cultivars has resulted in new weed biotypes that further hinder the effectiveness of weed management. In recent years, indica rice has been used increasingly as a germplasm source for breeding and for reduced-input systems in the United States, but little is known about its outcrossing potential with U.S. weedy red rice biotypes. In a 2-yr study, simple sequence repeat marker analysis was used to show that blackhull (BH) red rice (PI 653424) outcrossing to four, late-maturing indica cultivars averaged 0.0086% and ranged from 0.002% for ‘TeQing’ to 0.0173% for ‘4484’ (PI 615022). Rates of outcrossing to a tropical japonica cultivar standard, ‘Kaybonnet’ (0.032%), were substantially greater than for the indica cultivars. These differences in outcrossing were due largely to synchronization of flowering times between rice and red rice, with Kaybonnet and TeQing exhibiting the greatest and least synchronization, respectively. Outcrossing rates also may have been affected by rice–red rice flower density differences within the rice plots. Outcrossing from cultivated rice to the red rice (as pollen recipient), which was taller than all rice cultivars, was undetectable in these studies, and environmental conditions (e.g., temperature, humidity, solar radiation, and rainfall) were not strongly correlated with the outcrossing rates observed. Grain yields of the original BH red rice line were greatest in the Kaybonnet plots, demonstrating that the indica cultivars were superior competitors against this weed. Collectively, these results suggest that red rice biotypes that flower synchronously with rice cultivars are a potential source of pollen for outcrossing and gene flow in rice fields in the southern United States.

Palmer amaranth, a dioecious summer annual forb, originating in Sonoran desert washes, compromises crop yields in much of the southern United States and its range is expanding northward. Appropriate tactics for managing this weed proactively in the Upper Midwest will depend on characterizing its damage niche, the geographic range in which it can reduce crop yields. We implemented a common garden study in 2011 and 2012, planting eight accessions of Palmer amaranth from the southern and midwestern United States, into soybean crops in southern, central, and northern Illinois, at a population density of 8 plants m−2 with a biocontainment protocol. Once Palmer amaranth plants initiated flowering, they were removed and burned. Weed survival, flowering, and weed biomass were measured, in addition to soybean yield and weather data. Analyses indicated that Palmer amaranth's damage niche in Illinois soybean was independent of weed genotype or maternal environment. Despite competing only briefly, Palmer amaranth reduced soybean yields in all site–years, indicating its damage niche in Illinois, and much of the Midwest, is limited primarily by seed immigration rate. These results highlight the urgent need for weed managers to learn Palmer amaranth identification, prevent seed introduction, and maintain a policy of zero seed return.

The influence of environmental factors on germination and emergence of aryloxyphenoxy propanoate herbicide-resistant (AR) and -susceptible (AS) Asia Minor bluegrass were studied in laboratory and greenhouse experiments. Seeds were collected from AR and AS plants cultivated in separate greenhouses under the same environmental conditions. The results revealed that optimum temperatures for the germination of AS biotype were 10 to 25 C or alternating temperature of 15/5 to 30/20 C and light was not necessary. However, maximum germination occurred at 10 C or 15/5 C, and no germination occurred above 15 C or 25/15 C for the AR biotype. The AS Asia Minor bluegrass was consistently more tolerant to environmental stress, as evidenced by their greater germination at same pH value, osmotic potential, and NaCl concentration at 15/5 C compared to the AR biotype. Higher emergence rates were obtained when seeds were sown on the surface of soil for both biotypes. Emergence percentage of the AR biotype was below 14% when buried, whereas the AS biotype had 20% emergence at 2.5 cm burial depth. It is concluded that several environmental factors affect the germination of Asia Minor bluegrass, and the AS biotype showed higher germination percentage and a wider adaptive range under same treatments compared with the AR biotype. Due to the reduced emergence at depth, deep tillage could be an effective management to reduce AR Asia Minor bluegrass infestation in the following crop.

RIM, or “Ryegrass Integrated Management,” is a model-based software allowing users to conveniently test and compare the long-term performance and profitability of numerous ryegrass control options used in Australian cropping systems. As a user-friendly decision support system that can be used by farmers, advisers, and industry professionals, RIM can aid the delivery of key recommendations among the agricultural community for broadacre cropping systems threatened by herbicide resistance. This paper provides advanced users and future developers with the keys to modify the latest version of RIM in order to facilitate future updates, modifications, and adaptations to other situations. The various components of RIM are mapped and explained, and the key principles underlying the construction of the model are explained. The implementation of RIM into a Microsoft Excel® software format is also documented, with details on how user inputs are coded and parameterized. An overview of the biological, agronomic, and economic components of the model is provided, with emphasis on the ryegrass biological characteristics most critical for its effective management. The extreme variability of these parameters and the subsequent limits of RIM are discussed. The necessary compromises were achieved by emphasizing the primary end-use of the program as a decision support system for farmers and advisors.

Buckwheat is a broadleaved annual species that is often used as a summer cover crop for its quick growth, weed suppressive ability, and ease of management. Tartary buckwheat is a species related to buckwheat, with many of the same traits valued in buckwheat as a cover crop. However, Tartary buckwheat has been reported to grow more vigorously than buckwheat, especially in cool conditions, which might fill a unique niche for vegetable farmers in Wisconsin and other northcentral states. Our research objectives were to determine the effectiveness of Tartary buckwheat relative to buckwheat for weed suppression, both during the cover-cropping phase and after cover-crop termination during cabbage production, and quantify weed suppression, soil compaction, soil nitrogen availability, and cabbage yield in no-tillage (roller-crimped or sickle-bar mowed) and conventional-tillage (rototilled) systems. Across three site-years, we found that buckwheat emerged earlier and produced 64% more shoot dry biomass than Tartary buckwheat. Pretermination weed shoot biomass (predominantly Amaranthus and Setaria spp.) in Tartary buckwheat treatments was approximately twice that of buckwheat, and did not differ from weed shoot biomass in a control fallow treatment. Cabbage yield did not differ between cover crop species nor did yield differ between conventional-tillage cover cropped and control fallow treatments. However, weed biomass was greater, and cabbage yield was reduced, in no-tillage compared to conventional-tillage treatments. We also found evidence of greater soil compaction and less nitrate–nitrogen (NO3–N) availability in no-tillage than conventional-tillage treatments. These results suggest that Tartary buckwheat is not a suitable summer cover crop alternative to buckwheat for weed suppression prior to cabbage production.

Substantial resources are spent each year on weed control, but in many cases eradication projects are incomplete. Here we used the computer program NEWGARDEN to model whether alternate geometric patterns of incomplete removal (99% removed) of the increasingly invasive Callery pear from an isolated fragment differentially affect the rate of population recovery and genetic diversity retention. Geometric patterns of remaining founders within the fragment (1% of the fragment area) included: (A) a long rectangular strip centered on one edge; (B) a square at one corner; (C) a central square; or (D) scattered randomly throughout the entire fragment. Population re-growth and genetic diversity retention measures for each geometric removal pattern were modeled under two contrasting gene dispersal patterns (via both offspring and pollen): short versus long dispersal (both leptokurtic relative to the pistillate plant). After 14 bouts of mating, the greatest difference in census size among comparative recovery populations amounted to 393% (centered founders, long gene dispersal > scattered founders, short gene dispersal). The best pattern of removal for suppressing population regrowth was to leave founders scattered throughout the fragment when gene dispersal was short, or at one corner if gene dispersal was long. The only removal pattern that differed substantially in population genetics characteristics was when remnant individuals were left scattered throughout the fragment and dispersal was short (alleles continued to be lost; observed heterozygosity dropped 13.3% and was still rapidly declining; and inbreeding and/or subdivision were moderate (Fit = 0.12) and still rapidly increasing). Such comparative modeling can be used to suggest removal patterns that might greatly outperform other removal modalities in terms of suppressing the return of weed populations. The effectiveness of such modeling will be improved by acquisition of accurate life history information of targeted species.

Sufficient fertility is important for crop growth and yield but supplying a balanced amount of N, P, and K with compost and manure is a challenge and nutrient imbalances can benefit weeds more than crops. The goal of this study was to compare the aboveground growth responses of common northeastern U.S. crops and weeds to addition of composted poultry manure (CPM). A secondary goal was to test whether the observed growth responses to CPM could be attributed to the three macronutrients—N, P, and K—supplied in the CPM. Two field experiments were conducted over 2 yr. Species grown were corn, lettuce, kale, Powell amaranth, common lambsquarters, giant foxtail, and velvetleaf. Plants were grown in soil amended with CPM or single-nutrient organic N, P, and K fertility amendments. Single-nutrient P treatments with bone char did not adequately mimic P supply from CPM. In both years, biomass of all weeds studied increased with CPM amendment rate. Powell amaranth was the most responsive to CPM addition, increasing 1,775 and 159% from the control to the highest CPM rate in 2010 and 2011, respectively. Corn biomass increased by 22% with CPM rate in 2010 but did not increase with CPM rate in 2011. Lettuce biomass increased with CPM amendment rate (175% in 2010 and 109% in 2011), but due to the increased weed biomass at high CPM amendment rates, good weed control will be necessary to maintain this yield benefit. The increase in growth of Powell amaranth, common lambsquarters, and giant foxtail with CPM amendment was not due to N or K, and may have been influenced by P or another factor in the CPM. Velvetleaf was the only species that exhibited increased biomass with N addition (as blood meal), similarly to the increase with added CPM, suggesting the velvetleaf growth response to CPM was due to N in the CPM. The results show that nutrient ratios should be considered when applying organic amendments, because application rates of organic amendments that meet the crop's needs for one nutrient may oversupply other nutrients. Overfertilization will not benefit crop yield, but the results of this study show that high organic fertility application rates are likely to increase weed growth.