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A green, Lithic Torriorthent soil derived from a celadonite-rich, hydrothermally altered basalt immediately north of the Mojave Desert region in southern California was studied to investigate the fate of the celadonite in a pedogenic weathering environment. Celadonite was found to be disseminated in the highly altered rock matrix with cristobalite, chalcedony, and stilbite. X-ray powder diffraction (XRD) showed the soil material to contain celadonite having a d(060) value of 1.510 Å, indicative of its dioctahedral nature. Very little smectite was detected in the parent material, whereas Fe-rich smectite was found to be abundant in the soil. The Fe-smectite and celadonite were identified as the sole components of the green-colored clay fraction (<2 µm) of all soil horizons. The soil clay showed a single d(060) value of 1.507 Å, indicating that the smectite was also dioctahedral and that its b-dimension was the same as that of the celadonite. Mössbauer spectroscopy showed that the chemical environments of Fe in the rock-matrix celadonite and in the smectite-rich soil clay were also nearly identical. These data strongly suggest a simple transformation of the celadonite to an Fe-rich smectite during soil formation.
Supporting evidence for this transformation was obtained by artificial weathering of celadonite, using sodium tetraphenyl boron to extract interlayer K. The intensity of the 001 XRD peak (at 10.1 Å) of celadonite was greatly reduced after the treatment and a peak at 14.4 Å, absent in the pattern of the untreated material, appeared. On glycolation of the sample, this peak expanded to 17.4 Å, similar to the behavior of the soil smectite. The alteration of celadonite to smectite is a simple transformation requiring only the loss of interlayer K. The transformation is apparently possible under present-day conditions, inasmuch as the erosional landscape position, shallow depth, and lack of significant horizonation indicate that the soil is very young.
We summarize some of the past year's most important findings within climate change-related research. New research has improved our understanding of Earth's sensitivity to carbon dioxide, finds that permafrost thaw could release more carbon emissions than expected and that the uptake of carbon in tropical ecosystems is weakening. Adverse impacts on human society include increasing water shortages and impacts on mental health. Options for solutions emerge from rethinking economic models, rights-based litigation, strengthened governance systems and a new social contract. The disruption caused by COVID-19 could be seized as an opportunity for positive change, directing economic stimulus towards sustainable investments.
Technical summary
A synthesis is made of ten fields within climate science where there have been significant advances since mid-2019, through an expert elicitation process with broad disciplinary scope. Findings include: (1) a better understanding of equilibrium climate sensitivity; (2) abrupt thaw as an accelerator of carbon release from permafrost; (3) changes to global and regional land carbon sinks; (4) impacts of climate change on water crises, including equity perspectives; (5) adverse effects on mental health from climate change; (6) immediate effects on climate of the COVID-19 pandemic and requirements for recovery packages to deliver on the Paris Agreement; (7) suggested long-term changes to governance and a social contract to address climate change, learning from the current pandemic, (8) updated positive cost–benefit ratio and new perspectives on the potential for green growth in the short- and long-term perspective; (9) urban electrification as a strategy to move towards low-carbon energy systems and (10) rights-based litigation as an increasingly important method to address climate change, with recent clarifications on the legal standing and representation of future generations.
Social media summary
Stronger permafrost thaw, COVID-19 effects and growing mental health impacts among highlights of latest climate science.
We describe an ultra-wide-bandwidth, low-frequency receiver recently installed on the Parkes radio telescope. The receiver system provides continuous frequency coverage from 704 to 4032 MHz. For much of the band (${\sim}60\%$), the system temperature is approximately 22 K and the receiver system remains in a linear regime even in the presence of strong mobile phone transmissions. We discuss the scientific and technical aspects of the new receiver, including its astronomical objectives, as well as the feed, receiver, digitiser, and signal processor design. We describe the pipeline routines that form the archive-ready data products and how those data files can be accessed from the archives. The system performance is quantified, including the system noise and linearity, beam shape, antenna efficiency, polarisation calibration, and timing stability.
H2D+ and D2H+ are important chemical tracers of prestellar cores due to their pure rotational spectra that can be excited at the ~20 K temperature of these environments. The use of these molecules as probes of prestellar cores requires understanding the chemistry that forms and destroys these molecules. Of the eight key reactions that have been identified (Albertssonet al. 2013), five are thought to be well understood. The remaining three are the isotope exchange reactions of atomic D with H $${ + \over 3}$$, H2D+, and D2H+. Semi-classical results differ from the classical Langevin calculations by an order of magnitude (Moyano et al. 2004). To resolve this discrepancy, we have carried out laboratory measurements for these three reactions. Absolute cross sections were measured using a dual-source, merged fast-beams apparatus for relative collision energies between ~10 meV to ~10 eV (Hillenbrand et al. 2019). A semi-empirical model was developed incorporating high level quantum mechanical ab initio calculations for the zero-point-energy-corrected potential energy barrier in order to generate thermal rate coefficients for astrochemical models. Based on our studies, we find that these three reactions proceed too slowly at prestellar core temperatures to play a significant role in the deuteration of H $${ + \over 3}$$ isotopologues.
Impetigo is common in remote Indigenous children of northern Australia, with the primary driver in this context being Streptococcus pyogenes [or group A Streptococcus (GAS)]. To reduce the high burden of impetigo, the transmission dynamics of GAS must be more clearly elucidated. We performed whole genome sequencing on 31 GAS isolates collected in a single community from children in 11 households with ⩾2 GAS-infected children. We aimed to determine whether transmission was occurring principally within households or across the community. The 31 isolates were represented by nine multilocus sequence types and isolates within each sequence type differed from one another by only 0–3 single nucleotide polymorphisms. There was evidence of extensive transmission both within households and across the community. Our findings suggest that strategies to reduce the burden of impetigo in this setting will need to extend beyond individual households, and incorporate multi-faceted, community-wide approaches.
This paper describes the system architecture of a newly constructed radio telescope – the Boolardy engineering test array, which is a prototype of the Australian square kilometre array pathfinder telescope. Phased array feed technology is used to form multiple simultaneous beams per antenna, providing astronomers with unprecedented survey speed. The test array described here is a six-antenna interferometer, fitted with prototype signal processing hardware capable of forming at least nine dual-polarisation beams simultaneously, allowing several square degrees to be imaged in a single pointed observation. The main purpose of the test array is to develop beamforming and wide-field calibration methods for use with the full telescope, but it will also be capable of limited early science demonstrations.
The apparatus for X-ray diffraction imaging (XRDI) of 450-mm wafers, is now placed at the ANKA synchrotron radiation source in Karlsruhe, is described in the context of the drive to inspect wafers for plastic deformation or mechanical damage. It is shown that full wafer maps at high resolution can be expected to take a few hours to record. However, we show from experiments on 200-, 300-, and 450-mm wafers that a perimeter-scan on a 450-mm wafer, to pick up edge damage and edge-originated slip sources, can be achieved in just over 10 min. Experiments at the Diamond Light Source, on wafers still in their cassettes, suggest that clean-room conditions may not be necessary for such characterization. We conclude that scaling up of the 300-mm format Jordan Valley tools, together with the existing facility at ANKA, provides satisfactory capability for future XRDI analysis of 450-mm wafers.
The nucleation of dislocations at indents in silicon following rapid thermal annealing (RTA) has been examined by X-ray diffraction imaging (topography). For indentation loads below 200 mN, no slip bands were generated from the indent sites following RTA at 1000 °C under spike conditions. Upon plateau annealing at 1000 °C, slip dislocations were propagated from some indents but not all. Slip was also observed from edge defects not associated with indentation. For 500-mN indentation load, large scale dislocation sources were generated from the indent sites propagating on two of the four {111} slip planes. These dislocations multiplied into macroscopic-scale slip bands. A significant change in morphology was observed in the 60° dislocation segments after the screw segment reached the rear surface of the wafer. Dislocations changed line direction and in some cases appeared to leave the Peierls trough during glide.
Recent studies have suggested that expanded CAG/CTG repeats contribute to the genetic aetiology of schizophrenia and bipolar disorder. However, the nature of this contribution is uncertain and difficult to predict from other known trinucleotide repeat diseases that display much simpler patterns of inheritance. We have sought to replicate and extend earlier findings using Repeat Expansion Detection in an enlarged sample of 152 patients with schizophrenia, 143 patients with bipolar disorder, and 160 controls. We have also examined DNA from the parents of 62 probands with schizophrenia or bipolar disorder. Our results confirm our earlier, preliminary findings of an association between expanded trinucleotide repeats and both schizophrenia and bipolar disorder. However, our data do not support the hypothesis that trinucleotide repeat expansion can alone explain the complex patterns of inheritance of the functional psychoses neither can this mechanism fully explain apparent anticipation.
Sheep, after infection with louping ill virus and after re-infection with the same strain of virus 19–21 months later, were bled at intervals and their sera examined for neutralizing and haemagglutinin-inhibiting antibodies. Each antibody type was measured by the constant serum/variable virus and constant virus/variable serum methods. The persistence of each type of antibody and its significance in epidemiological studies is discussed. The relationship of antibody levels in ewes and their lambs was also examined.
1. Laboratory rabbits were infected with seventeen different preparations of myxoma virus (this probably represents thirteen strains of which four could be classified as fully virulent and the rest as attenuated, two being markedly so).
2. One hundred and twenty-four wild rabbit carcasses were obtained from a rabbit infestation in the throes of an outbreak of myxomatosis.
3. All the carcasses were examined for the presence or absence of myxoma antigens and antibodies by a modified Ouchterlony gel-diffusion precipition test.
4. As a result of (3), we have concluded that the gel test can provide confirmation of the presence or absence of myxomatosis. It is particularly useful in cases of doubt about the clinical diagnosis. The test can also give a reasonable indication of the number of recovered rabbits in a population and, more important still, it can give an indication of the recovery rate during an outbreak of disease. However, attempts to differentiate between fully virulent and attenuated strains of virus were unsuccessful.
Rare pebbles of granite have been discovered in the raised Patella beach at Butterslade, Gower, South Wales. Their petrography, trace element geochemistry and the Rb/Sr whole rock age of 55 ± 5 Ma confirm that they are derived from the Lundy granite which is about 49 km to the southwest of Gower. Amino acid analyses of fossil gastropods in the Patella beach have provided an age of 210000 years. Various hypotheses of transportation of pebbles from Lundy and Pembrokeshire to Butterslade are considered. Erratics from Pembrokeshire were probably transported by Pleistocene ice into the area while clasts of Lundy granite were moved by progradation of beach deposits northeastwards towards Gower during glacio-eustatic marine transgressions in the Pleistocene.
To describe an outbreak of invasive methicillin-resistant Staphylococcus aureus (MRSA) infection after percutaneous needle procedures (acupuncture and joint injection) performed by a single medical practitioner.
Setting.
A medical practitioner's office and 4 hospitals in Perth, Western Australia.
Patients.
Eight individuals who developed invasive MRSA infection after acupuncture or joint injection performed by the medical practitioner.
Methods.
We performed a prospective and retrospective outbreak investigation, including MRSA colonization surveillance, environmental sampling for MRSA, and detailed molecular typing of MRSA isolates. We performed an infection control audit of the medical practitioner's premises and practices and administered MRSA decolonization therapy to the medical practitioner.
Results.
Eight cases of invasive MRSA infection were identified. Seven cases occurred as a cluster in May 2004; another case (identified retrospectively) occurred approximately 15 months earlier in February 2003. The primary sites of infection were the neck, shoulder, lower back, and hip: 5 patients had septic arthritis and bursitis, and 3 had pyomyositis; 3 patients had bacteremia, including 1 patient with possible endocarditis. The medical practitioner was found to be colonized with the same MRSA clone [ST22-MRSA-IV (EMRSA-15)] at 2 time points: shortly after the first case of infection in March 2003 and again in May 2004. After the medical practitioner's premises and practices were audited and he himself received MRSA decolonization therapy, no further cases were identified.
Conclusions.
This outbreak most likely resulted from a breakdown in sterile technique during percutaneous needle procedures, resulting in the transmission of MRSA from the medical practitioner to the patients. This report demonstrates the importance of surveillance and molecular typing in the identification and control of outbreaks of MRSA infection.
By
W. D. Bowen, Marine Fish Division, Bedford Institute of Oceanography, Department of Fisheries and Oceans, Dartmouth, Nova Scotia, Canada B2Y 1A,
C. A. Beck, Alaska Department of Fish and Game, Division of Wildlife Conservation, Marine Mammals Section, Anchorage, Alaska 99518,
S. J. Iverson, Dalhousie University, Halifax, Nova Scotia, Canada B3H 4J1,
D. Austin, Dalhousie University, Halifax, Nova Scotia, Canada B3H 4J1,
J. I. MCMillan, Marine Fish Division, Bedford Institute of Oceanography, Department of Fisheries and Oceans, Dartmouth, Nova Scotia, Canada B2Y 1A
Edited by
I. L. Boyd, University of St Andrews, Scotland,S. Wanless, NERC Centre for Ecology and Hydrology, UK
Upper-trophic-level marine predators are presumed to respond to environmental variability. However, the nature of these responses has been studied in few pinnipeds, particularly during the non-breeding season. Between 1992 and 2003, we measured a suite of behavioural, dietary and life-history variables in grey seals; variables which were expected to vary in response to changes in prey availability. We found significant inter-annual variation in some diving variables indicative of foraging effort and in the species composition of their diets. Postpartum body mass of adult females did not vary inter-annually, but duration of offspring investment (lactation length), total energy investment (offspring weaning mass) and the difference in weaning mass of male and female pups did. There was considerable inter-annual variation in the estimated biomass of grey seal prey species from summer bottom-trawl surveys; however, there was little correlation between grey seal response variables with those estimates. There could be several reasons for this result, but three stand out. First, grey seal numbers on the Scotian Shelf have increased exponentially over the past four decades, implying overall favourable environmental conditions. Grey seals may have adjusted their behaviour and diet to account for variability in prey characteristics other than biomass. Secondly, foraging grey seals and their prey were not sampled at the same time of year. Finally, trends in the biomass of many of the species eaten by grey seals are poorly estimated, thus limiting our understanding of predator responses to ecosystem state.
The timing of reproductive events is critical for fitness, and these events are often linked to weather and climate. Weather components are thought to influence the nesting behaviour of freshwater turtles, but to date there have been few quantitative studies and no comparative studies. We compared the environmental cues used by nesting Australian (Emydura macquarii and Chelodina expansa) and North American (Chrysemys picta) freshwater turtles, and quantified the differences in weather between days with and without nesting activity within the nesting season. We also characterized the diel time of nesting for each species. The results suggest that nesting behaviour is related to warm air and water temperatures in C. picta and to rainfall in E. macquarii and C. expansa. Chrysemys picta primarily nests in the afternoon and evening, E. macquarii is a crepuscular nester, and C. expansa nests diurnally. While changes in life history resulting from climate change are difficult to predict, we suggest that an increase in the number of El Niño events may have adverse effects on the two Australian species, whereas increases in environmental temperature may expand the number of nesting opportunities for C. picta.
We use High Resolution Electron Microscopy together with Electron Energy Loss Spectroscopy to analyze the crystallography and the chemical configuration of a Co/SrTiO3 interface in a Co/SrTiO3/La2/3Sr1/3MnO3 magnetic tunnel junction.
Studies of the grey seal Halichoerus grypus mating system, using focal animal sampling constrained by study site location and size, limit the measurement of variation in male mating tactics and success. Using this method, the mating tactics of grey seal males have been classified as either ‘tenured’ or ‘transient’. Preliminary evidence is presented of wider variation in male mating tactics and success using mobile focal-animal techniques that are not constrained by site, and of the effects of age on behaviour when accounting for body mass. The study was conducted during the breeding seasons of 1997 and 1998 at Sable Island, Nova Scotia. Six young (11–12 years) and five old (20–25 years) males were captured at the beginning of the breeding season, weighed and fitted with a VHF transmitter and time-depth recorder. Each male was located daily, and a count of late-lactating females within a 10 m radius recorded as a measure of mating potential. Female guarding and observed copulatory attempts were used as a measure of mating success. Mean initial body mass of young males and old males was similar, 291 ± 13 kg and 298 ± 14 kg, respectively. All males changed location during the study period. Young males changed sites more often and moved shorter distances between sites than old males. Estimated mating success varied from probably no matings to a minimum of seven; there were no differences between young and old males. Maximum duration of stay at a site and the number of late-lactating females at a site significantly influenced mating success. All the males except for two young males departed on diving excursions during the breeding season and engaged in deep diving behaviour. Diving behaviour did not differ between the age classes. Our results indicate that the current classification of mating tactics in grey seal males is an oversimplification. Preliminary data show that age may account for some of the variation in male behaviour on land and mating success, but not for behaviour at sea.