National and continental-scale bird monitoring schemes, such as the Pan-European Common Bird Monitoring Scheme (PECBMS), are essential for tracking bird population trends across broad spatial scales. However, while these frameworks provide invaluable data for population monitoring, they may be less accurate in estimating species densities at small spatial scales, particularly for habitat-specialist species like the Red-backed Shrike Lanius collurio. This species is listed in Annex I of the EU Birds Directive, and its effective monitoring is a legal conservation obligation for EU Member States under the Natura 2000 framework. Ensuring accurate data on its population status is therefore critical for meeting international biodiversity targets. To evaluate this limitation, we compared density estimates from the Common Breeding Birds Survey (MPPL) with those obtained from intensive, targeted surveys across 53 study plots, each covering an area of 1 km², in eastern Poland. Although density estimates from MPPL and the targeted field study were correlated, a deeper analysis revealed that MPPL (2.1 individuals/km²) consistently underestimated densities recorded during targeted surveys (3.9 breeding pairs/km²). Using Generalised Linear Models (GLMs), we explored the habitat characteristics that may contribute to these discrepancies. Only two predictors, i.e. the proportion of buffer zones around arable fields and around mixed crops, were significantly associated with underestimation. In both cases, a higher share of buffer zones led to a greater difference between MPPL and targeted estimates, indicating that landscape structure influences detectability. Differences in survey timing between the two approaches, with MPPL visits conducted earlier in the breeding season, coupled with species-specific breeding behaviours (including peak activity later in the breeding season) may have influenced these differences. This study highlights that although bird surveys are an indispensable tool for analysing trends and comparing densities between surfaces over large spatial domains, their usefulness for studies at small spatial scales may be limited.